BAC Information

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BAC

Clone NameB6Ng01-283D20
Chromosome19 (Build37)
Map Location 14,264,783 - 14,265,870
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505
Downstream geneEG667433, Tle4, EG433225
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283D20.bB6Ng01-283D20.g
ACCGA082251GA082252
length1,2031,069
definitionB6Ng01-283D20.b B6Ng01-283D20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggacacattaaaaaagatactccatcacgatcaagtcagctc
catctaagaaatggaaggatgattcaataggcatcaaatagatgtagtct
accatgtaaacagattcaaagacaaaatccatatgatctcatttaaaatc
cccagaaggctcttgatcatattcaacatttcttcatgacagaagtccta
gaaaattttgggatatagaagacactcataacacaatagatgcaatatac
aacaagcagacaactgttttcatgctaaatgaataaaatttcagggcatc
tccactaaatgcaatagcaaaacaagggcgctcgttctctccatttttgt
tcaatgaagtattcaaattcttagagctataaacaagtgaaagagagaaa
ggtaacacaaatagaaagaaaaataaagttatcctgattttaaatgatat
aattatattcataaaaaacactaaagactgggactgaagagttgagctct
ccacttgcagctgttgcagaggacccacagcctctatacctcccgttcct
tagggatatgtcgccctcttgtggttgcattgagtaccaggcatgcacta
atatatgtgcaaaacactcagaaacattaaaagaaaagaaaaggaaaagg
aaagaaaagaaattagtaaaacagaataaaaataataaaataaaaatttt
aatgaccataagtgacaccagataatttctacaacaaataaacatgatca
taaaggtagcagcatacaaaattaatgcacaaactcagtatctttccttt
atacaaataaacaaaccaagaaaccaatcaggaaaaaatattattcacaa
taggctcaaaaaatatatatcttagaagatacgtaaataagaaaatggat
gttttaaataatgaagatttaaagatttttaaaggaagaagtttaagaaa
atgtcagaaaatgaaaagaccccccatactcatggattggtaggattgat
attacatagtgggcactctatataccacatgacccaactatactactatt
gggcatacatctatacagcatgtgtctacattggatgtgcaatgcacccc
ctgtttactgctgctctatcattattatcaagcactcagcctatgcaaga
ttcataatgatgaactttaaatagaattccaaaccgttttgtgtggaaca
ctc
gaattcttcatttgatctgcctgtccatattaagcatagttatttgaaac
ttgtgtcttagatttctacttgattagaatcccttgaagatagtttctat
agcttgtcactttaaatttcacagttttgtcttcactgtgttcattttga
ttgagtggtggacattgtacatgaacaactgaaatcaaacctatttatga
catcttccacttaagaattccatgtgaatctgaaagccaaatgtcttggt
tttgggttttgacaagtgaactagccattgcagttcaatattaaaaatat
gctaagataggagttagacttctagtcaacccttacctactgagtgtgtg
tattccaattgagagtagaaagaactcaaaaatctgttttttacattgac
aaagaccaaattattaatttttttatcataaggacctatgaggatttgat
tattcaacttaacagcctgaattttgattatcctttcagaaatccacagg
tgctctcagaagcaaagaactttcaggagctgagctctactttctggctc
ttgttcttactgttgttccaatccccatcccctcccagcttcctcctccc
ccatctcctccccctcccccactggagtctttcactgaaatgttacttac
taattctacaatcattttagtacttggtggttttttttttttccccaagt
agttttcatcaagcgatttagcatgaagaattacctggtgtatcctggag
cattctatgaattatttacaggcaaataaaagcattttccccatcccaac
atgtgaaatagtttacacaatgcagtcatcttagaagtcatatagtaaca
tcttagattctattatgttcatttattgcactatttttagattggtaagt
ataaatattttttaaatgatttcttaaatatagtaaatacatttataacc
agtaacttcttctattcatttctcaacttacaatgtctgtctgaaacagt
cagctcagttatagatctctacatttagcttatagtatatgcccaacaca
cagaaggcctccaacacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_14264783_14265870
seq2: B6Ng01-283D20.g_63_1131 (reverse)

seq1  ATGTGTTTGAAGTGCTTCTGTGTGTTTGGGCATATACCTATAAAGCTAAA  50
      ||||| ||| ||  |||||||||| ||||||||||| |||| ||||||||
seq2  ATGTG-TTGGAGGCCTTCTGTGTG-TTGGGCATATA-CTAT-AAGCTAAA  46

seq1  TGTAGAGATCTATAACTGAGCCTTGACTGTTTTCAAGGACAGACATTGGT  100
      |||||||||||||||||||||  |||||| |||||  |||||||||||  
seq2  TGTAGAGATCTATAACTGAGC--TGACTG-TTTCA--GACAGACATTG--  89

seq1  TAAAGTTGGAGAAATGAAATAGAAAGAAGTTACTGGTTTTATAAATGTAT  150
        ||||| |||||||| ||||| |||||||||||||  ||||||||||| 
seq2  -TAAGTT-GAGAAATG-AATAG-AAGAAGTTACTGG--TTATAAATGTA-  132

seq1  TTTACTATTATTTAAGAAATCATTT-AAAAATATTTATTACTTACCAATC  199
      ||||||| ||||||||||||||||| ||||||||||| ||||||||||||
seq2  TTTACTA-TATTTAAGAAATCATTTAAAAAATATTTA-TACTTACCAATC  180

seq1  TAAAAATAGTGCAATAAATGAACATAATAGAATCTAAGATGTTACTATAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAGTGCAATAAATGAACATAATAGAATCTAAGATGTTACTATAT  230

seq1  GACTTCTAAGATGACTGCATTGTGTAAACTATTTCACATGTTGGGATGGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTAAGATGACTGCATTGTGTAAACTATTTCACATGTTGGGATGGG  280

seq1  GAAAATGCTTTTATTTGCCTGTAAATAATTCATAGAATGCTCCAGGATAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGCTTTTATTTGCCTGTAAATAATTCATAGAATGCTCCAGGATAC  330

seq1  ACCAGGTAATTCTTCATGCTAAATCGCTTGATGAAAACTACTTGGGGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGTAATTCTTCATGCTAAATCGCTTGATGAAAACTACTTGGGGAAA  380

seq1  AAAAAAAAACCACCAAGTACTAAAATGATTGTAGAATTAGTAAGTAACAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAACCACCAAGTACTAAAATGATTGTAGAATTAGTAAGTAACAT  430

seq1  TTCAGTGAAAGACTCCAGTGGGGGAGGGGGAGGAGATGGGGGAGGAGGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGAAAGACTCCAGTGGGGGAGGGGGAGGAGATGGGGGAGGAGGAA  480

seq1  GCTGGGAGGGGATGGGGATTGGAACAACAGTAAGAACAAGAGCCAGAAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGAGGGGATGGGGATTGGAACAACAGTAAGAACAAGAGCCAGAAAG  530

seq1  TAGAGCTCAGCTCCTGAAAGTTCTTTGCTTCTGAGAGCACCTGTGGATTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCTCAGCTCCTGAAAGTTCTTTGCTTCTGAGAGCACCTGTGGATTT  580

seq1  CTGAAAGGATAATCAAAATTCAGGCTGTTAAGTTGAATAATCAAATCCTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGGATAATCAAAATTCAGGCTGTTAAGTTGAATAATCAAATCCTC  630

seq1  ATAGGTCCTTATGATAAAAAAATTAATAATTTGGTCTTTGTCAATGTAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTCCTTATGATAAAAAAATTAATAATTTGGTCTTTGTCAATGTAAA  680

seq1  AAACAGATTTTTGAGTTCTTTCTACTCTCAATTGGAATACACACACTCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGATTTTTGAGTTCTTTCTACTCTCAATTGGAATACACACACTCAG  730

seq1  TAGGTAAGGGTTGACTAGAAGTCTAACTCCTATCTTAGCATATTTTTAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAAGGGTTGACTAGAAGTCTAACTCCTATCTTAGCATATTTTTAAT  780

seq1  ATTGAACTGCAATGGCTAGTTCACTTGTCAAAACCCAAAACCAAGACATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACTGCAATGGCTAGTTCACTTGTCAAAACCCAAAACCAAGACATT  830

seq1  TGGCTTTCAGATTCACATGGAATTCTTAAGTGGAAGATGTCATAAATAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTCAGATTCACATGGAATTCTTAAGTGGAAGATGTCATAAATAGG  880

seq1  TTTGATTTCAGTTGTTCATGTACAATGTCCACCACTCAATCAAAATGAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTCAGTTGTTCATGTACAATGTCCACCACTCAATCAAAATGAAC  930

seq1  ACAGTGAAGACAAAACTGTGAAATTTAAAGTGACAAGCTATAGAAACTAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGAAGACAAAACTGTGAAATTTAAAGTGACAAGCTATAGAAACTAT  980

seq1  CTTCAAGGGATTCTAATCAAGTAGAAATCTAAGACACAAGTTTCAAATAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGGGATTCTAATCAAGTAGAAATCTAAGACACAAGTTTCAAATAA  1030

seq1  CTATGCTTAATATGGACAGGCAGATCAAATGAAGAATTC  1088
      |||||||||||||||||||||||||||||||||||||||
seq2  CTATGCTTAATATGGACAGGCAGATCAAATGAAGAATTC  1069