BAC Information

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BAC

Clone NameB6Ng01-284I21
Chromosome19 (Build37)
Map Location 12,149,693 - 12,307,893
singlet/doubletdoublet
Overlap geneOlfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1
Upstream geneMs4a8a, Gm336, LOC624395, 1700025F22Rik, Ms4a13, Ms4a12, Ms4a1, Ms4a5, Gm1276, Ms4a7, Ms4a4a, LOC435588, Ms4a4c, LOC433221, Ms4a4b, Ms4a6c, EG666926, Ms4a6b, Ms4a4d, LOC100040454, Ms4a6d, Ms4a2, Ms4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425
Downstream geneOlfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284I21.bB6Ng01-284I21.g
ACCGA083226GA083227
length2711,179
definitionB6Ng01-284I21.b B6Ng01-284I21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,149,693 - 12,149,963)(12,306,719 - 12,307,893)
sequence
ttctgaaaggtgacttgtttttccactaaaggagacttcaggcacttact
aaggcagttagtgatgtggccacaatggtgagacagatactgagccagta
gtttcaccacctccttattctgttagcaaccaagtgcatgattgagctga
actgtgagctgtcaacaatatcagtttgatcaagcaaggaagagaaggaa
actgtgtgtgtttgtgtatgtttgtgtatatgtgtgtaggaggccgtggt
gtgtgtgtgtgtgtgtgtgtg
gaattcaattctcaagtcttacactgtcttcgtcatttccatctgcctta
tgcttgtgttttctcaggcatttatactacttaagctttctccttgattt
cattgggctggctgtatttttctttctgtgcatttggatagagaagatca
cacgataaggtaaagggaggaggaagggctctgtcttggtgtgtgctttg
ggaacttcatatattatttgtcttttctaatttttctaaacccattacta
ggttagaaactcattcctactctttgccgcttcttctctgaccttatgct
ccttcagttttttccttactctttaaatcattgagctacacaaacatgag
gggaagaagagatctatttgtcacttctcatttccaaatatctgtgacat
ctttttaaacatgatccattcatgcagtctcatttaaaagttaagagaat
tggcctagaatatgaaaatagagaacttgagagtccattacagggagtct
gactcagagttgcagagagaagtagcaatggtttctatggaaaactggca
tagtggatagcaaggttaagcatgacctctatatgaactctaagatattt
tcagaatgaaaagaaggtttgttgacttccaaatgtctcaaaagatgaat
gctttcccaagagagtgaagagcctgggcagggaaccctttctaaagctg
ctctctcctctatagcccaggagacctgttattaacagtttgtgtggctt
taattgcttatgttttgtgtgagttgtgcattcaaatcttttctaagatg
caacagagaaaatcctcaagcacttaaaagcttcttgctctacagctggc
tcattgctgaagaaaatgaagtccaaccttgcaaacaataaagcaattac
tgaactttaaatagtaagaaaatgagatagatgctccagaaccagaagtg
gaaaccatttattggtcacttcagaatacatgggtgcaccacaaaggaag
agggattggatcacagaagaaaccttttcaaaaacttctaagtctcttaa
gagatgcaataacaaaggtaagtcaggggctcagatccagaatacaactt
tatagaattacaaatacctttaatcctaaatcatcgttcaatgcctaagt
tcactatgtatggatggtgcaatttttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12149693_12149963
seq2: B6Ng01-284I21.b_53_323

seq1  TTCTGAAAGGTGACTTGTTTTTCCACTAAAGGAGACTTCAGGCACTTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAAGGTGACTTGTTTTTCCACTAAAGGAGACTTCAGGCACTTACT  50

seq1  AAGGCAGTTAGTGATGTGGCCACAATGGTGAGACAGATACTGAGCCAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGTTAGTGATGTGGCCACAATGGTGAGACAGATACTGAGCCAGTA  100

seq1  GTTTCACCACCTCCTTATTCTGTTAGCAACCAAGTGCATGATTGAGCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCACCACCTCCTTATTCTGTTAGCAACCAAGTGCATGATTGAGCTGA  150

seq1  ACTGTGAGCTGTCAACAATATCAGTTTGATCAAGCAAGGAAGAGAAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGAGCTGTCAACAATATCAGTTTGATCAAGCAAGGAAGAGAAGGAA  200

seq1  ACTGTGTGTGTTTGTGTATGTTTGTGTATATGTGTGTAGGAGGCCGTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTGTGTTTGTGTATGTTTGTGTATATGTGTGTAGGAGGCCGTGGT  250

seq1  GTGTGTGTGTGTGTGTGTGTG  271
      |||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTG  271

seq1: chr19_12306719_12307893
seq2: B6Ng01-284I21.g_64_1242 (reverse)

seq1  TTAAAAATTGCACAATCCAATTACATAGTGAAACCTA-GCATTGAAGGAT  49
      ||||||||||||| |||||  ||||||||| ||| || |||||||| |||
seq2  TTAAAAATTGCACCATCCA--TACATAGTG-AACTTAGGCATTGAACGAT  47

seq1  GA-TTAG--ATAAAGTTATTTGTAAATCTATAAAGTTGTA-TCTGGATCT  95
      || ||||   ||||| ||||||||| |||||||||||||| |||||||||
seq2  GATTTAGGATTAAAGGTATTTGTAATTCTATAAAGTTGTATTCTGGATCT  97

seq1  GAGCCCCTTGACTTA-CTTTGTTATTGCATCTC-TAAGAGACTTAG-AGT  142
      ||||||| ||||||| ||||||||||||||||| |||||||||||| |||
seq2  GAGCCCC-TGACTTACCTTTGTTATTGCATCTCTTAAGAGACTTAGAAGT  146

seq1  TTTTGAAAAGGTTTCCTTTCTTGTGATCCAATCCCTCTT-CTTTGTGGTG  191
      |||||||||||||||  ||| |||||||||||||||||| ||||||||||
seq2  TTTTGAAAAGGTTTC--TTC-TGTGATCCAATCCCTCTTCCTTTGTGGTG  193

seq1  CACCCATGTATTCTGAAGTGACCAATAAATGG-TTCCACTTCTGGTTCTG  240
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CACCCATGTATTCTGAAGTGACCAATAAATGGTTTCCACTTCTGGTTCTG  243

seq1  GAGCATCTATCTCATTTTCTTACTATTT-AAGTTCAGTAATTGCTTTATT  289
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAGCATCTATCTCATTTTCTTACTATTTAAAGTTCAGTAATTGCTTTATT  293

seq1  GTTTGCAAGGTTGGACTTCATTTTCTTCAGCAATGAGCCAGCTGTAGAGC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCAAGGTTGGACTTCATTTTCTTCAGCAATGAGCCAGCTGTAGAGC  343

seq1  AAGAAGCTTTTAAGTGCTTGAGGATTTTCTCTGTTGCATCTTAGAAAAGA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCTTTTAAGTGCTTGAGGATTTTCTCTGTTGCATCTTAGAAAAGA  393

seq1  TTTGAATGCACAACTCACACAAAACATAAGCAATTAAAGCCACACAAACT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATGCACAACTCACACAAAACATAAGCAATTAAAGCCACACAAACT  443

seq1  GTTAATAACAGGTCTCCTGGGCTATAGAGGAGAGAGCAGCTTTAGAAAGG  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATAACAGGTCTCCTGGGCTATAGAGGAGAGAGCAGCTTTAGAAAGG  493

seq1  GTTCCCTGCCCAGGCTCTTCACTCTCTTGGGAAAGCATTCATCTTTTGAG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCTGCCCAGGCTCTTCACTCTCTTGGGAAAGCATTCATCTTTTGAG  543

seq1  ACATTTGGAAGTCAACAAACCTTCTTTTCATTCTGAAAATATCTTAGAGT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGGAAGTCAACAAACCTTCTTTTCATTCTGAAAATATCTTAGAGT  593

seq1  TCATATAGAGGTCATGCTTAACCTTGCTATCCACTATGCCAGTTTTCCAT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAGAGGTCATGCTTAACCTTGCTATCCACTATGCCAGTTTTCCAT  643

seq1  AGAAACCATTGCTACTTCTCTCTGCAACTCTGAGTCAGACTCCCTGTAAT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCATTGCTACTTCTCTCTGCAACTCTGAGTCAGACTCCCTGTAAT  693

seq1  GGACTCTCAAGTTCTCTATTTTCATATTCTAGGCCAATTCTCTTAACTTT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCTCAAGTTCTCTATTTTCATATTCTAGGCCAATTCTCTTAACTTT  743

seq1  TAAATGAGACTGCATGAATGGATCATGTTTAAAAAGATGTCACAGATATT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAGACTGCATGAATGGATCATGTTTAAAAAGATGTCACAGATATT  793

seq1  TGGAAATGAGAAGTGACAAATAGATCTCTTCTTCCCCTCATGTTTGTGTA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATGAGAAGTGACAAATAGATCTCTTCTTCCCCTCATGTTTGTGTA  843

seq1  GCTCAATGATTTAAAGAGTAAGGAAAAAACTGAAGGAGCATAAGGTCAGA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAATGATTTAAAGAGTAAGGAAAAAACTGAAGGAGCATAAGGTCAGA  893

seq1  GAAGAAGCGGCAAAGAGTAGGAATGAGTTTCTAACCTAGTAATGGGTTTA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGCGGCAAAGAGTAGGAATGAGTTTCTAACCTAGTAATGGGTTTA  943

seq1  GAAAAATTAGAAAAGACAAATAATATATGAAGTTCCCAAAGCACACACCA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTAGAAAAGACAAATAATATATGAAGTTCCCAAAGCACACACCA  993

seq1  AGACAGAGCCCTTCCTCCTCCCTTTACCTTATCGTGTGATCTTCTCTATC  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGCCCTTCCTCCTCCCTTTACCTTATCGTGTGATCTTCTCTATC  1043

seq1  CAAATGCACAGAAAGAAAAATACAGCCAGCCCAATGAAATCAAGGAGAAA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCACAGAAAGAAAAATACAGCCAGCCCAATGAAATCAAGGAGAAA  1093

seq1  GCTTAAGTAGTATAAATGCCTGAGAAAACACAAGCATAAGGCAGATGGAA  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAGTAGTATAAATGCCTGAGAAAACACAAGCATAAGGCAGATGGAA  1143

seq1  ATGACGAAGACAGTGTAAGACTTGAGAATTGAATTC  1175
      ||||||||||||||||||||||||||||||||||||
seq2  ATGACGAAGACAGTGTAAGACTTGAGAATTGAATTC  1179