BAC Information

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BAC

Clone NameB6Ng01-288E07
Chromosome19 (Build37)
Map Location 7,622,870 - 7,623,476
singlet/doubletsinglet
Overlap genenone
Upstream geneRps6ka4, Ccdc88, Prdx5, 0610038D11Rik, Esrra, 1700019N12Rik, Kcnk4, Gpr137, Bad, Plcb3, Ppp1r14b, Fkbp2, Vegfb, Dnajc4, Nudt22, Trpt1, BC032204, Stip1, D930010J01Rik, Flrt1, Otub1, Cox8a, Nat11, Rcor2, Mark2, AI846148, EG665419, 2700081O15Rik, Rtn3, LOC100039547, 5730596K20Rik
Downstream geneHrasls3, Lgals12, Hrasls5, LOC433217, Slc22a19, LOC666543, BC014805, LOC632903, AB056442, LOC620946, LOC623030, 9530053H05Rik, EG434674, LOC100039705, D630002G06Rik, EG633120, EG666601, LOC100039749, C730048C13Rik, LOC100040004, LOC666612
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288E07.bB6Ng01-288E07.g
ACCGA085977GA085978
length1,1831,013
definitionB6Ng01-288E07.b B6Ng01-288E07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatctagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactctgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaaggagctaaagggatctgcaaccct
attagtggaacaacattatgacctaacagtaccccggagctctttgactc
tagcttcatattaatatcaaagatggcctagtcgtcatcacctggaaaga
gaggcccattggacttgcaaacttttatatgccaatacatgggtaacacc
aggcctaaaaaaggggtgaatgtggttggccta
gaattcctggggtcggggcagttggatactgccagctatggatagagata
gctacacccttctgtgacagcactgggagtatacagactttggaatggac
taaggctgagcagagggcctttgaggccttgaaaaaggctctggccctgg
ttctctgagacattactaagttattctatgtgtacacagatgaggccaga
agcactgcctaagatgtcctcatacaaaccctgggaccctggaaaatatt
ggtggcatatctgtccaagagacttgacctggtcacagctagatagccat
catgtataaaggccatagctgccattgccctgctggtaaaagaagctgac
aagttaaccgtagggcacaaactgtttctgatagtcatacactctgttga
ggccttcttgaggggggcacctgaaagatcaatgtcttaacacctgggtg
actcagtaccaagccctgcttctggatcaactctgtattcagttctataa
gacatcagccctcaaccctgccatactcctgccagacaacaacccaacgg
gtctcttgcatgactgtcttgaggtgactgacctggtccaatcaatcagg
acttatttaattgatgattggtgacaccaggaggtattgttcatggatgc
tagtggttttatccaagatggaatcaggtatacaggggcatcagtttttg
accaaagataagaccatcggagcagcctgtaagaaggggaactcaaggag
ctgagcttttatctttgaattgagtactacactggggcaaagacaaaggt
tattgccatgtacgctgataaccaatatgcttttgtcattgctcatgttc
agggggctctaaataggggaagaggattgctaactgtcttagttagattt
ttattgctgtgaagaggccatgaccaaggcaactcttataaatgcaacat
ttaaactacttactgtaacagaagttgtcctgaataactgactatagtcc
cagctggctggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_7622870_7623476
seq2: B6Ng01-288E07.g_68_674

seq1  GAATTCCTGGGGTCGGGGCAGTTGGATACTGCCAGCTATGGATAGAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGGGTCGGGGCAGTTGGATACTGCCAGCTATGGATAGAGATA  50

seq1  GCTACACCCTTCTGTGACAGCACTGGGAGTATACAGACTTTGGAATGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACACCCTTCTGTGACAGCACTGGGAGTATACAGACTTTGGAATGGAC  100

seq1  TAAGGCTGAGCAGAGGGCCTTTGAGGCCTTGAAAAAGGCTCTGGCCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCTGAGCAGAGGGCCTTTGAGGCCTTGAAAAAGGCTCTGGCCCTGG  150

seq1  TTCTCTGAGACATTACTAAGTTATTCTATGTGTACACAGATGAGGCCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGAGACATTACTAAGTTATTCTATGTGTACACAGATGAGGCCAGA  200

seq1  AGCACTGCCTAAGATGTCCTCATACAAACCCTGGGACCCTGGAAAATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGCCTAAGATGTCCTCATACAAACCCTGGGACCCTGGAAAATATT  250

seq1  GGTGGCATATCTGTCCAAGAGACTTGACCTGGTCACAGCTAGATAGCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCATATCTGTCCAAGAGACTTGACCTGGTCACAGCTAGATAGCCAT  300

seq1  CATGTATAAAGGCCATAGCTGCCATTGCCCTGCTGGTAAAAGAAGCTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATAAAGGCCATAGCTGCCATTGCCCTGCTGGTAAAAGAAGCTGAC  350

seq1  AAGTTAACCGTAGGGCACAAACTGTTTCTGATAGTCATACACTCTGTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAACCGTAGGGCACAAACTGTTTCTGATAGTCATACACTCTGTTGA  400

seq1  GGCCTTCTTGAGGGGGGCACCTGAAAGATCAATGTCTTAACACCTGGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCTTGAGGGGGGCACCTGAAAGATCAATGTCTTAACACCTGGGTG  450

seq1  ACTCAGTACCAAGCCCTGCTTCTGGATCAACTCTGTATTCAGTTCTATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTACCAAGCCCTGCTTCTGGATCAACTCTGTATTCAGTTCTATAA  500

seq1  GACATCAGCCCTCAACCCTGCCATACTCCTGCCAGACAACAACCCAACGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCAGCCCTCAACCCTGCCATACTCCTGCCAGACAACAACCCAACGG  550

seq1  GTCTCTTGCATGACTGTCTTGAGGTGACTGACCTGGTCCAATCAATCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTGCATGACTGTCTTGAGGTGACTGACCTGGTCCAATCAATCAGG  600

seq1  ACTTATT  607
      |||||||
seq2  ACTTATT  607