MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-288L10
Chromosome	19 (Build37)
Map Location	51,342,236 - 51,343,386
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Sorcs1
Downstream gene	LOC100042924, LOC100042928, LOC668536, LOC100042936, Ins1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Sorcs1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58178 MGI:1929666
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042924 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042924
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC100042928 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042928
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC668536 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668536
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 40 ESTs, 5 Proteins pseudo : _no_value

name	LOC100042936 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042936
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Ins1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16333 MGI:96572
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sorcs1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12025517 GeneID:58178 MGI:1929666
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : VPS10 domain receptor protein SORCS 1 transcript_id : NM_021377.1

name	LOC100042924 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270513 GeneID:100042924
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Ubtf protein transcript_id : XM_001479081.1

name	Ins1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606344 GeneID:16333 MGI:96572
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin I transcript_id : NM_008386.3

name	Sorcs1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12025518 GeneID:58178 MGI:1929666
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008565 - protein transporter activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : SORCS receptor 1 protein_id : NP_067352.1

name	LOC100042924 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270514 GeneID:100042924
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479131.1

name	Ins1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606345 CCDS:CCDS29898.1 GeneID:16333 MGI:96572
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005179 - hormone activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006006 - glucose metabolism [Evidence IEA]; GO:0015758 - glucose transport [Evidence TAS]; GO:0007582 - physiological process [Evidence IEA] codon_start : 1 product : insulin I protein_id : NP_032412.3

name	LOC100042928 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042928
definition	number : 1 pseudo : _no_value

name	LOC100042936 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042936
definition	number : 2 pseudo : _no_value

name	LOC100042936 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042936
definition	number : 1 pseudo : _no_value

name	LOC668536 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270565 GeneID:668536
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 40 ESTs, 5 Proteins product : similar to ribosomal protein L31 pseudo : _no_value transcript_id : XR_034741.1

clone name	MSMg01-435J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194O09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-299D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351I10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-490H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344F17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-357B15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-392O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130L15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-372D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017O18
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-288L10.b	B6Ng01-288L10.g
ACC	GA086306	GA086307
length	1,145	1,165
definition	B6Ng01-288L10.b	B6Ng01-288L10.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattccaaggacagcagctcgggagatgactggagacatttgaaagaag cagagattacttacaaggaaaaaggaactggactctttagatactgggag gaaaatgatcaggagaaagagggcaggggtataaagtgagaatccttgtg gataaatcaaatgtggtatccatttactgaagactaatactttttaaaaa gacatgtatatgatttaatttcatcaaaagtaagccttgctaagttcaac acttttctagttcattcattagtggaagaatctatctgctcacctaatca aatattcttgtttatggccattgtcagccagcaaactttggctgaagtaa taacaggtactttctgatgctacatataaagaaatctagagttcccatct tcacacaaggtagcctgccaagcatttcatgaactcagcacacaaggtag cattttcatgaactcatcacataaggtagcctgccaagccttccagagac agaagaccaggatgaagaactgagaccactagttagtagcccacagaact gtaagactcagaacctccttaatataataagctgagacatgtggaaatta atccaggaaacatagaatcaaccacaagaactagcatctgattcctacaa tgaagccactgatgggaggggttgttacacagcaagagttaaatattgcc tgcttcccaaacacaaacacaacacgtgcgtgtgagcatgcatgcacgca cgcacacacacacacacacacacacacacacacacacacacacacactca ctatctctttttttctatctctaacatacccccatatgcataccttcaaa tgcacacacatagcaaacacacacatgcatatgtgcacacatatacacac atgaatatgtgcacacacacatatataccatacatacatagagaaagaca catgacacagacacagtcacacacacacacacacacacactcacacacac atatataccccatatgccccaaatgggggtgattttgacagatatcacta cccttgtagatattgttatggtgaaagtcaaagcatattataatactgat tgagactgtaaaccttcctgagcagtgttctgtatggaagtgacc	gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt gagtttgtttatataatggattacattgatggattttcgtatattaaacc atccctgcatccctggaataaaacctacttggtcaggatggatgattgct ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc atcgatgttcataagagaaattggtctgaagttctctatctttgttggat ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg ggtagaataccttctacttcaatcttgtgaaaaagtttgtgcagaactgg agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg gtcctgggctttttttggctgggagactattaataactgcttctatttct ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga atagttcttcttgtttccacttggttgatttcacccctgagtttgattat ttcctgccgtctactcctcttgggtgaattgcttccttttttttctagag cttttagatgtgttgtcaagctgctagtatgtgctctctcccggtttttt cttgaaaggcactcatagctatgagtttccctcttagaaatgccttcatt gtgtccaaaagtttggtacgttgtggctcatttcataaactctaaaagtc ttatttcttcttaatctctgaaccaaggtatccattggaaagaggtgttc agtttccagtgaagtgctcggatatcattttgttactgagagatcagctt actggcactgtggta
quality values	Open. Hide. 62 41 31 32 62 62 37 16 47 62 62 31 51 39 62 54 62 56 62 62 62 62 62 62 59 59 59 36 62 59 46 62 36 24 19 17 19 23 18 38 27 32 32 31 28 48 35 62 62 62 62 62 59 62 54 54 59 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 54 59 62 59 50 46 44 56 50 48 48 54 56 46 59 62 62 59 62 62 62 62 59 59 62 59 62 62 62 62 62 59 62 62 62 62 62 59 59 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 56 56 56 56 62 56 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 42 62 62 62 62 62 62 62 62 43 56 62 47 47 56 62 62 62 62 62 54 43 62 62 56 56 62 56 62 62 62 52 62 62 54 62 62 62 52 54 62 62 54 62 62 62 54 62 62 62 62 62 54 62 62 62 54 62 54 58 52 58 58 54 58 58 53 54 58 50 58 54 58 58 54 52 58 58 41 58 58 58 58 58 48 52 54 54 54 52 52 58 52 54 58 58 58 58 58 58 49 42 46 34 31 52 46 58 58 58 58 47 47 58 52 58 58 58 46 41 52 51 58 44 48 51 52 58 58 42 51 42 38 58 53 51 51 58 51 51 49 58 51 58 42 51 53 54 51 58 53 53 58 53 51 51 28 58 58 58 47 50 53 32 58 51 58 58 51 40 54 53 42 51 46 50 46 32 49 43 43 49 31 58 58 50 30 52 51 29 47 42 53 40 53 53 50 53 41 23 41 58 31 41 37 46 58 41 40 30 40 50 51 29 50 52 52 34 52 54 52 54 34 27 54 49 29 40 49 27 54 54 52 41 52 37 46 38 44 50 37 54 45 54 49 54 53 45 52 54 25 47 32 42 54 42 31 37 53 33 53 45 47 35 31 41 47 47 37 52 52 51 38 51 44 52 37 42 31 44 37 52 42 54 45 52 38 51 36 47 45 47 34 51 27 40 21 27 21 29 23 32 33 40 31 40 33 40 27 41 25 36 53 41 52 31 42 32 43 53 52 32 30 46 46 46 46 46 46 33 32 32 31 45 31 45 30 21 30 31 33 31 22 19 46 51 51 31 28 43 29 31 31 34 26 42 29 46 33 28 31 30 41 41 28 29 43 26 31 31 31 31 26 42 31 42 38 34 30 27 46 42 31 36 43 28 40 26 31 33 34 31 31 23 31 27 26 32 31 34 34 24 25 22 31 25 31 24 32 23 41 23 33 18 37 30 25 31 30 22 30 32 30 31 27 31 33 18 39 21 44 19 39 12 36 8 23 13 38 18 35 23 35 32 13 38 24 42 10 33 6 38 11 44 18 30 34 38 22 43 22 35 15 12 6 26 9 9 15 28 30 5 11 5 14 24 6 4 6 5 7 6 7 6 24 12 15 7 11 7 19 6 17 10 11 5 8 11 14 5 16 11 17 7 21 6 16 6 21 6 29 8 34 6 8 5 31 8 29 7 31 14 30 8 17 24 20 23 7 16 27 23 38 28 29 7 22 11 10 30 38 34 40 8 8 28 27 16 30 31 4 9 7 6 5 21 9 8 7 13 3 6 28 27 16 12 33 11 27 9 25 10 10 10 9 6 6 7 10 7 14 6 11 15 18 7 5 11 14 40 15 16 17 19 9 29 23 12 22 6 13 7 6 5 4 15 8 5 9 13 26 16 19 12 7 9 15 8 5 20 12 5 18 4 6 14 8 7 5 3 3 6 8 6 12 11 8 3 6 10 4 8 7 13 12 2 3 2 4 23 8 5 24 12 2 2 3 6 7 9	Open. Hide. 62 47 38 43 62 62 62 62 62 47 59 24 18 19 18 27 22 10 18 31 27 28 36 28 27 35 43 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 43 43 43 43 46 51 49 32 33 34 45 43 33 36 56 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 51 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 37 37 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 39 49 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 58 58 58 58 58 54 58 58 58 58 54 47 54 58 58 45 54 52 58 54 58 58 58 58 58 54 58 58 58 58 58 54 41 58 58 52 58 58 58 58 58 54 49 58 50 51 58 58 58 58 54 53 53 58 58 58 54 58 47 35 54 58 58 33 40 58 58 54 54 58 58 52 58 58 58 49 38 49 58 51 48 49 58 50 58 58 58 54 51 39 53 53 58 58 58 51 39 58 51 58 52 52 52 53 47 51 49 51 53 58 58 58 58 42 47 50 58 46 17 58 37 33 58 58 53 58 52 58 58 50 58 46 58 58 51 51 51 51 46 58 43 51 52 51 42 32 19 35 28 29 52 47 49 31 51 49 46 38 52 50 53 42 53 50 39 41 58 52 58 18 20 18 9 16 23 54 49 43 37 52 24 58 58 33 49 24 41 52 39 40 50 42 35 30 47 23 54 54 49 51 37 47 54 54 35 41 38 41 54 54 44 35 49 52 31 32 42 40 52 39 37 52 42 37 37 31 34 13 25 23 54 41 27 54 25 37 39 54 37 37 52 53 46 35 49 31 38 32 22 14 54 54 40 51 39 42 37 54 41 40 53 45 31 29 27 34 32 45 35 46 40 53 32 53 53 30 41 40 32 21 52 26 19 40 53 32 52 39 37 33 35 32 31 35 35 33 51 33 31 51 28 28 27 8 51 33 45 18 13 45 40 38 51 31 31 27 28 31 24 51 31 32 31 34 51 51 41 31 31 37 17 42 48 31 31 43 25 34 32 31 46 38 33 35 31 31 26 46 24 24 42 33 31 36 29 41 40 30 37 14 14 30 29 19 14 37 44 11 32 46 17 29 24 33 28 41 28 46 46 46 41 39 41 16 29 25 28 29 43 21 27 33 46 41 22 21 16 14 14 35 31 32 32 11 8 6 22 15 26 31 42 31 32 31 31 31 23 18 18 24 32 18 29 30 26 31 30 10 6 16 44 38 9 16 37 33 39 34 39 24 23 13 31 23 18 39 11 29 31 9 22 33 27 10 7 21 26 19 32 7 6 11 17 37 10 18 21 10 25 48 17 8 16 18 34 13 11 25 39 20 9 22 10 9 9 12 4 7 26 11 27 7 22 5 4 21 4 15 38 19 27 7 21 14 20 19 5 16 26 6 17 11 13 6 4 15 4 14 8 5 25 28 20 4 7 20 15 28 7 4 11 15 7 21 15 15 28 14 5 11 14 10 18 13 15 9 22 9 21 23 17 16 7 7 18 3 5 5 2 6 6 6 23 20 9 7 7 16 6 8 6 8 8 7 9 12 7 4 5 20 21 4 12 6 5 5 3 5 5 7 6 6 17 22 9 18 23 7 4 3 1 3 3 3 3 5 3 3 3 1 7 5 8 6 18 3 3 4 15 17 4 2 1 3 5 12 5 13 8 4 10 7 7 18 22 5 5 5 2 2 2 1 1 2 3 5 11 10 5 17 3 3 3 3 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr19_51342236_51343386
seq2: B6Ng01-288L10.b_48_1192 (reverse)

seq1  GGTCACTTTTCATACAAGGAAACACTGCCTCAGAAAGGGTTACAGTTCTC  50
      |||||| || ||||||    ||||||| ||||| |||| |||||| ||||
seq2  GGTCAC-TTCCATACA---GAACACTG-CTCAGGAAGGTTTACAG-TCTC  44

seq1  AATCAGTA-TAT-ATATGCTTTTGACTTTCACCATAAC-ATATCTACAA-  96
      |||||||| ||| |||||| |||||||||||||||||| |||||||||| 
seq2  AATCAGTATTATAATATGC-TTTGACTTTCACCATAACAATATCTACAAG  93

seq1  GGTAGTGAATATCCTGTCAAAATCACCCC--ATTGGGGCATATGGTGTAT  144
      ||||||| |||| ||||||||||||||||   ||||||||||||| ||||
seq2  GGTAGTG-ATAT-CTGTCAAAATCACCCCCATTTGGGGCATATGGGGTAT  141

seq1  ATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTCT  194
      |||    |||||||||| ||||||||||||||||||||||| ||||||||
seq2  ATA----TGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGACTGTGTCT  187

seq1  GTGTC-TGTGTCTTTCTCTATGTATGTATGGTATATATGTGTGTGTGCAC  243
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCATGTGTCTTTCTCTATGTATGTATGGTATATATGTGTGTGTGCAC  237

seq1  ATATTCATGTGTGTATATGTGTGCACATATGCATGTGTGTGTTTGCTATG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCATGTGTGTATATGTGTGCACATATGCATGTGTGTGTTTGCTATG  287

seq1  TGTGTGCATTTGAAGGTATGCATATGGGGGTATGTTAGAGATAGAAAAAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCATTTGAAGGTATGCATATGGGGGTATGTTAGAGATAGAAAAAA  337

seq1  AGAGATAGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATAGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  387

seq1  TGTGTGCGTGCGTGCATGCATGCTCACACGCACGTGTTGTGTTTGTGTTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCGTGCGTGCATGCATGCTCACACGCACGTGTTGTGTTTGTGTTT  437

seq1  GGGAAGCAGGCAATATTTAACTCTTGCTGTGTAACAACCCCTCCCATCAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCAGGCAATATTTAACTCTTGCTGTGTAACAACCCCTCCCATCAG  487

seq1  TGGCTTCATTGTAGGAATCAGATGCTAGTTCTTGTGGTTGATTCTATGTT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCATTGTAGGAATCAGATGCTAGTTCTTGTGGTTGATTCTATGTT  537

seq1  TCCTGGATTAATTTCCACATGTCTCAGCTTATTATATTAAGGAGGTTCTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGATTAATTTCCACATGTCTCAGCTTATTATATTAAGGAGGTTCTG  587

seq1  AGTCTTACAGTTCTGTGGGCTACTAACTAGTGGTCTCAGTTCTTCATCCT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTACAGTTCTGTGGGCTACTAACTAGTGGTCTCAGTTCTTCATCCT  637

seq1  GGTCTTCTGTCTCTGGAAGGCTTGGCAGGCTACCTTATGTGATGAGTTCA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTCTGTCTCTGGAAGGCTTGGCAGGCTACCTTATGTGATGAGTTCA  687

seq1  TGAAAATGCTACCTTGTGTGCTGAGTTCATGAAATGCTTGGCAGGCTACC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATGCTACCTTGTGTGCTGAGTTCATGAAATGCTTGGCAGGCTACC  737

seq1  TTGTGTGAAGATGGGAACTCTAGATTTCTTTATATGTAGCATCAGAAAGT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGAAGATGGGAACTCTAGATTTCTTTATATGTAGCATCAGAAAGT  787

seq1  ACCTGTTATTACTTCAGCCAAAGTTTGCTGGCTGACAATGGCCATAAACA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTTATTACTTCAGCCAAAGTTTGCTGGCTGACAATGGCCATAAACA  837

seq1  AGAATATTTGATTAGGTGAGCAGATAGATTCTTCCACTAATGAATGAACT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATTTGATTAGGTGAGCAGATAGATTCTTCCACTAATGAATGAACT  887

seq1  AGAAAAGTGTTGAACTTAGCAAGGCTTACTTTTGATGAAATTAAATCATA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTGTTGAACTTAGCAAGGCTTACTTTTGATGAAATTAAATCATA  937

seq1  TACATGTCTTTTTAAAAAGTATTAGTCTTCAGTAAATGGATACCACATTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTCTTTTTAAAAAGTATTAGTCTTCAGTAAATGGATACCACATTT  987

seq1  GATTTATCCACAAGGATTCTCACTTTATACCCCTGCCCTCTTTCTCCTGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATCCACAAGGATTCTCACTTTATACCCCTGCCCTCTTTCTCCTGA  1037

seq1  TCATTTTCCTCCCAGTATCTAAAGAGTCCAGTTCCTTTTTCCTTGTAAGT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCCTCCCAGTATCTAAAGAGTCCAGTTCCTTTTTCCTTGTAAGT  1087

seq1  AATCTCTGCTTCTTTCAAATGTCTCCAGTCATCTCCCGAGCTGCTGTCCT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTGCTTCTTTCAAATGTCTCCAGTCATCTCCCGAGCTGCTGTCCT  1137

seq1  TGGAATTC  1151
      ||||||||
seq2  TGGAATTC  1145

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information