BAC Information

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BAC

Clone NameB6Ng01-291D08
Chromosome19 (Build37)
Map Location 13,771,538 - 13,894,320
singlet/doubletdoublet
Overlap geneOlfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499
Upstream geneKeg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490
Downstream geneOlfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291D08.bB6Ng01-291D08.g
ACCGA088155GA088156
length1,1351,168
definitionB6Ng01-291D08.b B6Ng01-291D08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,771,538 - 13,772,672)(13,893,135 - 13,894,320)
sequence
gaattccaatgcaataattttttacagttggtcacattgaagaaattctc
cttgaactttggctttctccagttgaacaaagtgtaaggtgtgccactgg
ggatttaccgcctcttaaactcattagttttacagaaatcccacagagga
cattcaaaatatgactagtaaagcaagaatgaactcagcaattatatcag
gatctatcttataatattgagaaacacgtatgtcttaggacacaaatttg
gactaatccataaaattatgttttctatggcgatccttctcatctaattc
tattccaattactaattttaaagggttctctcttctcttgagtgtcagca
cattaaaaaaaaatctcactactgtcatgtggaccatatgaaggcatctt
acactatcttcttgtttcctctgtaagatgctgaacaaaaacctcatgaa
agggctccttcagtcatctgtggtagcaacattaattcttggcagcagaa
ttaattttctctttggtgagtttccttgcatgaaaaatggaatgaaacaa
tttgaaaccacttaaagagtatttaaaagactccatttctgtgataatgc
tgctgctcattgtctttccaatacaaataaatgttaaatttctatagtga
tttatagtagaaatgaataaccataaatatcaaaattaaattgtagacca
caagtgagttattaaagtattcatttttgtactgacatatacagaaaagg
gagttgtgataaatggtttgtctagttccatgtgtctgataaggccatgc
ttagtttgtggcttttctgcatgtcattgaaacataagcaaatcgactat
tctttgctcaaactacatatatccgattaacttttcatgtaaaattaagt
tgttcacatcaagactttaatgaaaatttacacaataatatatactgcaa
atttctgagaaagtgaacatttttcaagatgatcattatatgtttcattt
ctaaagaacaaagtttatatttataagggaaagagttcagaattagtttt
tcagcatctttaaattcatatgtattatgtgtggttctttattgaagtta
agggtacaatcatcctattttatcctccaaatttg
gaattctgtgcagagacatgaaaaatcctcagctccaagctccagaaaca
acaccacacttcaataacaacttgagcagaacataagtcacagcaaaaag
ttcatttcctgaacatgctgctattgagctatatgatgaagagtgcttag
ggggttccctgtaatcccaaaaggtttgtttttatcttctaagctgagta
gagaggatgagacagtagtgatttccaaggtgcattctctctccagggat
tggttttccccaacagccccaaagactctctctggagctgatctgtaacc
acatgaactctttctactttgttactctcacacagccaactcccaaagca
tttttcataccatccatttgatttgtttgaaaacataaaaatccataact
tacactgagctatgtcagtgatcttagatgctctgtataaagtgctttaa
caacatttattcattctgaattcaaaatccataaatcaaccagattattc
taccaagtaattatcgcataactattggccttgaaatcctggagagatac
tggctctaaaataaggggtacacaaaccagaaaaggtgagctgggtgaaa
attttgccttgaccattggaaacagtcacgtcgtggaacatttttcatcc
tagaagtctaataggtaagataagtcacctttttttgaaacctttgtttt
catgcaaatgagattggtattacactacagaatttggatacaagattgcc
ttgtaagttgttgtatgctgtatttatccactagggggaaccaaccccat
gcgtttgagctctgatttttggactaagtagatttgtgaggctgcagatc
atttcactgactaaccatggataacttatttaactatccagaatccgagt
cttctccaaaacaaacgattctttcacagagtcatatatgtaagataatg
cagaatgtaccacaccatacttggtccagaaaagtgtttgccaaaatatc
acctgtgtttggaaagcatattgtctgatgagctcatttgagtctgagac
acgtaaaatctaatcagtttgcttttagggttctatgtctagaaatatta
gtatcgaagctcagtttccatattctaaataagaactggcctgatgctac
ctatagttgttgttcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13771538_13772672
seq2: B6Ng01-291D08.b_49_1183

seq1  GAATTCCAATGCAATAATTTTTTACAGTTGGTCACATTGAAGAAATTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATGCAATAATTTTTTACAGTTGGTCACATTGAAGAAATTCTC  50

seq1  CTTGAACTTTGGCTTTCTCCAGTTGAACAAAGTGTAAGGTGTGCCACTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACTTTGGCTTTCTCCAGTTGAACAAAGTGTAAGGTGTGCCACTGG  100

seq1  GGATTTACCGCCTCTTAAACTCATTAGTTTTACAGAAATCCCACAGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTACCGCCTCTTAAACTCATTAGTTTTACAGAAATCCCACAGAGGA  150

seq1  CATTCAAAATATGACTAGTAAAGCAAGAATGAACTCAGCAATTATATCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAAAATATGACTAGTAAAGCAAGAATGAACTCAGCAATTATATCAG  200

seq1  GATCTATCTTATAATATTGAGAAACACGTATGTCTTAGGACACAAATTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTATCTTATAATATTGAGAAACACGTATGTCTTAGGACACAAATTTG  250

seq1  GACTAATCCATAAAATTATGTTTTCTATGGCGATCCTTCTCATCTAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAATCCATAAAATTATGTTTTCTATGGCGATCCTTCTCATCTAATTC  300

seq1  TATTCCAATTACTAATTTTAAAGGGTTCTCTCTTCTCTTGAGTGTCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCAATTACTAATTTTAAAGGGTTCTCTCTTCTCTTGAGTGTCAGCA  350

seq1  CATTAAAAAAAAATCTCACTACTGTCATGTGGACCATATGAAGGCATCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAAAAAAATCTCACTACTGTCATGTGGACCATATGAAGGCATCTT  400

seq1  ACACTATCTTCTTGTTTCCTCTGTAAGATGCTGAACAAAAACCTCATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTATCTTCTTGTTTCCTCTGTAAGATGCTGAACAAAAACCTCATGAA  450

seq1  AGGGCTCCTTCAGTCATCTGTGGTAGCAACATTAATTCTTGGCAGCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTCCTTCAGTCATCTGTGGTAGCAACATTAATTCTTGGCAGCAGAA  500

seq1  TTAATTTTCTCTTTGGTGAGTTTCCTTGCATGAAAAATGGAATGAAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTCTCTTTGGTGAGTTTCCTTGCATGAAAAATGGAATGAAACAA  550

seq1  TTTGAAACCACTTAAAGAGTATTTAAAAGACTCCATTTCTGTGATAATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAACCACTTAAAGAGTATTTAAAAGACTCCATTTCTGTGATAATGC  600

seq1  TGCTGCTCATTGTCTTTCCAATACAAATAAATGTTAAATTTCTATAGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTCATTGTCTTTCCAATACAAATAAATGTTAAATTTCTATAGTGA  650

seq1  TTTATAGTAGAAATGAATAACCATAAATATCAAAATTAAATTGTAGACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGTAGAAATGAATAACCATAAATATCAAAATTAAATTGTAGACCA  700

seq1  CAAGTGAGTTATTAAAGTATTCATTTTTGTACTGACATATACAGAAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGAGTTATTAAAGTATTCATTTTTGTACTGACATATACAGAAAAGG  750

seq1  GAGTTGTGATAAATGGTTTGTCTAGTTCCATGTGTCTGATAAGGCCATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTGATAAATGGTTTGTCTAGTTCCATGTGTCTGATAAGGCCATGC  800

seq1  TTAGTTTGTGGCTTTTCTGCATGTCATTGAAACATAAGCAAATCGACTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTGTGGCTTTTCTGCATGTCATTGAAACATAAGCAAATCGACTAT  850

seq1  TCTTTGCTCAAACTACATATATCCGATTAACTTTTCATGTAAAATTAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCTCAAACTACATATATCCGATTAACTTTTCATGTAAAATTAAGT  900

seq1  TGTTCACATCAAGACTTTAATGAAAATTTACACAATAATATATACTGCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACATCAAGACTTTAATGAAAATTTACACAATAATATATACTGCAA  950

seq1  ATTTCTGAGAAAAGTGAACATTTTTCAAGATGATCATTATATGTTTCATT  1000
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAG-AAAGTGAACATTTTTCAAGATGATCATTATATGTTTCATT  999

seq1  TCTAAAGAACAAAGTTTATA-TTATAAGGGAAAGAGTTCAGAATTAGTTT  1049
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCTAAAGAACAAAGTTTATATTTATAAGGGAAAGAGTTCAGAATTAGTTT  1049

seq1  TTCAGCATCTTTAAATTCATATTGTA-TATGTTGTGTTCTTTTATGAAGT  1098
      ||||||||||||||||||||| |||| |||||   |||||||  ||||||
seq2  TTCAGCATCTTTAAATTCATA-TGTATTATGTGTGGTTCTTTATTGAAGT  1098

seq1  TAAGGTTACCAATCATTCCTA-TTTATCCTCC-AATTTG  1135
      ||||| || |||||| ||||| |||||||||| ||||||
seq2  TAAGGGTA-CAATCA-TCCTATTTTATCCTCCAAATTTG  1135

seq1: chr19_13893135_13894320
seq2: B6Ng01-291D08.g_68_1235 (reverse)

seq1  ACTGGACAACAACATTATGAGGTAGCATCA-GCCAG-TCTTATTTTAGAT  48
      |||| ||||||||  ||| ||||||||||| ||||| ||||||||   ||
seq2  ACTGAACAACAAC--TAT-AGGTAGCATCAGGCCAGTTCTTATTTAGAAT  47

seq1  ATGAAAAACTGAGCTTTGGATACTTAATTATTTTTCTAGACATAGAACAC  98
      |||  ||||||||| || |||||    | || |||||||||||||||| |
seq2  ATG-GAAACTGAGC-TTCGATAC----TAATATTTCTAGACATAGAAC-C  90

seq1  CTAAAAAGCAAAACTGATTAGATTTTACCTTGGTTCTCAGACTCAAATTG  148
      || |||||| ||||||||||||||||||   |  ||||||||||||| ||
seq2  CT-AAAAGC-AAACTGATTAGATTTTAC---GTGTCTCAGACTCAAA-TG  134

seq1  AGCTCATTCAGACAATATTGCTTTTCCAAACACAGGTGATATTTTGGCAA  198
      |||||| |||||||||| ||| ||||||||||||||||||||||||||||
seq2  AGCTCA-TCAGACAATA-TGC-TTTCCAAACACAGGTGATATTTTGGCAA  181

seq1  ACACTTTTTCTGGACCAAGTATGGTGTGGTACATTCTGCATTATCTTACA  248
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAC-TTTTCTGGACCAAGTATGGTGTGGTACATTCTGCATTATCTTACA  230

seq1  TATATGACTCTGTGAAAGAATCGTTTGTTTTGGAGAAGACTCGGATTCTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGACTCTGTGAAAGAATCGTTTGTTTTGGAGAAGACTCGGATTCTG  280

seq1  GATAGTTAAATAAGTTATCCATGGTTAGTCAGTGAAATGATCTGCAGCCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTTAAATAAGTTATCCATGGTTAGTCAGTGAAATGATCTGCAGCCT  330

seq1  CACAAATCTACTTAGTCCAAAAATCAGAGCTCAAACGCATGGGGTTGGTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATCTACTTAGTCCAAAAATCAGAGCTCAAACGCATGGGGTTGGTT  380

seq1  CCCCCTAGTGGATAAATACAGCATACAACAACTTACAAGGCAATCTTGTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTAGTGGATAAATACAGCATACAACAACTTACAAGGCAATCTTGTA  430

seq1  TCCAAATTCTGTAGTGTAATACCAATCTCATTTGCATGAAAACAAAGGTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATTCTGTAGTGTAATACCAATCTCATTTGCATGAAAACAAAGGTT  480

seq1  TCAAAAAAAGGTGACTTATCTTACCTATTAGACTTCTAGGATGAAAAATG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAAAGGTGACTTATCTTACCTATTAGACTTCTAGGATGAAAAATG  530

seq1  TTCCACGACGTGACTGTTTCCAATGGTCAAGGCAAAATTTTCACCCAGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACGACGTGACTGTTTCCAATGGTCAAGGCAAAATTTTCACCCAGCT  580

seq1  CACCTTTTCTGGTTTGTGTACCCCTTATTTTAGAGCCAGTATCTCTCCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTTCTGGTTTGTGTACCCCTTATTTTAGAGCCAGTATCTCTCCAG  630

seq1  GATTTCAAGGCCAATAGTTATGCGATAATTACTTGGTAGAATAATCTGGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCAAGGCCAATAGTTATGCGATAATTACTTGGTAGAATAATCTGGT  680

seq1  TGATTTATGGATTTTGAATTCAGAATGAATAAATGTTGTTAAAGCACTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTATGGATTTTGAATTCAGAATGAATAAATGTTGTTAAAGCACTTT  730

seq1  ATACAGAGCATCTAAGATCACTGACATAGCTCAGTGTAAGTTATGGATTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAGCATCTAAGATCACTGACATAGCTCAGTGTAAGTTATGGATTT  780

seq1  TTATGTTTTCAAACAAATCAAATGGATGGTATGAAAAATGCTTTGGGAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTTTCAAACAAATCAAATGGATGGTATGAAAAATGCTTTGGGAGT  830

seq1  TGGCTGTGTGAGAGTAACAAAGTAGAAAGAGTTCATGTGGTTACAGATCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTGTGAGAGTAACAAAGTAGAAAGAGTTCATGTGGTTACAGATCA  880

seq1  GCTCCAGAGAGAGTCTTTGGGGCTGTTGGGGAAAACCAATCCCTGGAGAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGAGAGAGTCTTTGGGGCTGTTGGGGAAAACCAATCCCTGGAGAG  930

seq1  AGAATGCACCTTGGAAATCACTACTGTCTCATCCTCTCTACTCAGCTTAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGCACCTTGGAAATCACTACTGTCTCATCCTCTCTACTCAGCTTAG  980

seq1  AAGATAAAAACAAACCTTTTGGGATTACAGGGAACCCCCTAAGCACTCTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAAAACAAACCTTTTGGGATTACAGGGAACCCCCTAAGCACTCTT  1030

seq1  CATCATATAGCTCAATAGCAGCATGTTCAGGAAATGAACTTTTTGCTGTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATATAGCTCAATAGCAGCATGTTCAGGAAATGAACTTTTTGCTGTG  1080

seq1  ACTTATGTTCTGCTCAAGTTGTTATTGAAGTGTGGTGTTGTTTCTGGAGC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATGTTCTGCTCAAGTTGTTATTGAAGTGTGGTGTTGTTTCTGGAGC  1130

seq1  TTGGAGCTGAGGATTTTTCATGTCTCTGCACAGAATTC  1186
      ||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCTGAGGATTTTTCATGTCTCTGCACAGAATTC  1168