BAC Information

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BAC

Clone NameB6Ng01-297H04
Chromosome19 (Build37)
Map Location 32,681,233 - 32,682,359
singlet/doubletsinglet
Overlap genenone
Upstream genePrkg1, 1810073H04Rik, Asah2, EG668042, Sgms1, 2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1
Downstream genePapss2, Atad1, Pten, B430203M17Rik, 6530404N21Rik, LOC638381, EG668095, LOC628236, AI747699
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297H04.bB6Ng01-297H04.g
ACCGA092802GA092803
length1,1281,199
definitionB6Ng01-297H04.b B6Ng01-297H04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacagatctttgcaaagggaatgttgtaaatgatgaagcttagc
aattttagtaagaaacaggaaaacgtttcacaaaaaaattaaaacagtat
atattattaaaacaaaaacaaaaacaaaaacaaaaaccaatagcaaaata
gcaagccattcagcacactggtgaaacacaggtcagctctcagctctcca
aatgcagatgcctctagctgagagctaatggcctgtgggtctcacatcag
aactgaacccagaacaccccaagagcccacagcaggaaatggcaaacttt
tcttaagggctccaaaagcatacaccagctttgtagagatcaggaattct
gtgacaaactgttgggagactagctgtggttattgtcacgtgagcatccc
gtgctctgatgaggtttatttatgggctctgaaatgtgaatttcttacat
gtttcatataccatgaattgtgtaggaaatccccccttttcaactttccc
ttacaccttctcttacttaggttactgaaagaagcaagggactggatttg
atcgttataaaaatatgtgtaactgggggagtcgaatcaatcacgtgttt
ataacaatttgtaaacctaggccttccaagaaaatgagggcatttcatgg
tccagttcacaatgaacttgtagaacccttccttctgaatgttgttcaga
ttagctgtagcttctctctctgctctgagaggaagtgaaggcttggcgtt
tcgtccatgatctattgggtgacgatttgcttcatctttttatatgtcag
tgtcctcatctgtgacgggagacgctcacagtgagctctttactgttgct
gggacagttagtaaattgcatgaatatagcctaggcaagtgtgaagaaat
gaggaatcacaaacacccagagggaccctgctctaactcaaggggacagt
tacactgtcacatacagtgcacacatcaaattgtgcttcctgacacactt
ggagtttaatagggatcctgggttgtcccccagctcaccctgctggtgtc
ccactgtaaggctggtgctggggtactctgtatatttttcttaggttttg
gttttggttgaatttttcaatcaggtct
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagcc
ctgcgcagagaggcagtgcgcagagaggcagtgcgcagactcattcattc
ccagagaggaacaaaggaaaatacaacaggcatttccggtctttgaagga
gccgagggtgggcgtgtccacgctccggtagaatacttacaaattaaaga
acttgccgagtcggtccgtaaatatggaaccaatgctaattttaccttgg
tgcagttagacaggcttgccggcatggcactaactcctgccgactggcaa
acggttgtaaaagccgctctccctagtatgggcaaatatatggaatggag
agctctttggcatgaaactgcacaagcgcaggcccgagcaaacgcagctg
ctttgactccagagcagagagattggacttttgacttgttaacgggtcag
ggagcttattctgctgatcaaacaaactaccattggggagcttatgccca
agtttcctccacggctattagggcctggaaggcgctctctcgagcaggtg
aaaccactgggcagttaacaaagataatccagggacctcaggaatccttc
tcagattttgtggccagaatgacagaggcagcagagcgtatttttggaga
gtcagagcaagctgcgcctctgatagaacagctaatctatgagcaagcca
caaaggagtgccgagcgggccatagccccaagaaagaacaaaggcttaca
agactggctcaggtctgtcgagagcttgggggacctctcaccaatgcagg
cttagcggccgccatcctccaatctcagaccgctccatgagcagaaatga
tcagaggacatgttttattgcggaaagcctggcattttagaagaatgcag
agctcagataaacaggagggactctccactctttgctctaggtgtgcagg
tttatcatagagcctgacagtgtcgcctctggtgaggaattagctgaatc
tccccactgatagtcaatcaactggaatgtgtgccaaaaacaacgagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_32681233_32682359
seq2: B6Ng01-297H04.b_49_1176 (reverse)

seq1  AGACCTGATTGAAAAATCAAACCAAACCAAAAACCTTAAGAAAATATACA  50
      |||||||||||||||||  ||||||| | ||||||| |  ||||||||||
seq2  AGACCTGATTGAAAAATTCAACCAAAACCAAAACCTAAGAAAAATATACA  50

seq1  GAGGTAACCCAGCA-CAGCC-TACAGTGGGACACCAGCAGGGTGAGCTGG  98
      || ||| ||||||| ||||| ||||||||||||||||||||||||||| |
seq2  GA-GTACCCCAGCACCAGCCTTACAGTGGGACACCAGCAGGGTGAGCT-G  98

seq1  GGGGACAA-CCAGGATCCCTATTAAACTCCAAGTGTGTCAGGAAGCACAA  147
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACAACCCAGGATCCCTATTAAACTCCAAGTGTGTCAGGAAGCACAA  148

seq1  TTTGATGTGTGCACTGTATGTGACAGTGTAACTGTCCCCTTGAGTTAGAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGTGTGCACTGTATGTGACAGTGTAACTGTCCCCTTGAGTTAGAG  198

seq1  CAGGGTCCCTCTGGGTGTTTGTGATTCCTCATTTCTTCACACTTGCCTAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTCCCTCTGGGTGTTTGTGATTCCTCATTTCTTCACACTTGCCTAG  248

seq1  GCTATATTCATGCAATTTACTAACTGTCCCAGCAACAGTAAAGAGCTCAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATATTCATGCAATTTACTAACTGTCCCAGCAACAGTAAAGAGCTCAC  298

seq1  TGTGAGCGTCTCCCGTCACAGATGAGGACACTGACATATAAAAAGATGAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCGTCTCCCGTCACAGATGAGGACACTGACATATAAAAAGATGAA  348

seq1  GCAAATCGTCACCCAATAGATCATGGACGAAACGCCAAGCCTTCACTTCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATCGTCACCCAATAGATCATGGACGAAACGCCAAGCCTTCACTTCC  398

seq1  TCTCAGAGCAGAGAGAGAAGCTACAGCTAATCTGAACAACATTCAGAAGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAGCAGAGAGAGAAGCTACAGCTAATCTGAACAACATTCAGAAGG  448

seq1  AAGGGTTCTACAAGTTCATTGTGAACTGGACCATGAAATGCCCTCATTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTCTACAAGTTCATTGTGAACTGGACCATGAAATGCCCTCATTTT  498

seq1  CTTGGAAGGCCTAGGTTTACAAATTGTTATAAACACGTGATTGATTCGAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAGGCCTAGGTTTACAAATTGTTATAAACACGTGATTGATTCGAC  548

seq1  TCCCCCAGTTACACATATTTTTATAACGATCAAATCCAGTCCCTTGCTTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCAGTTACACATATTTTTATAACGATCAAATCCAGTCCCTTGCTTC  598

seq1  TTTCAGTAACCTAAGTAAGAGAAGGTGTAAGGGAAAGTTGAAAAGGGGGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTAACCTAAGTAAGAGAAGGTGTAAGGGAAAGTTGAAAAGGGGGG  648

seq1  ATTTCCTACACAATTCATGGTATATGAAACATGTAAGAAATTCACATTTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTACACAATTCATGGTATATGAAACATGTAAGAAATTCACATTTC  698

seq1  AGAGCCCATAAATAAACCTCATCAGAGCACGGGATGCTCACGTGACAATA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCCATAAATAAACCTCATCAGAGCACGGGATGCTCACGTGACAATA  748

seq1  ACCACAGCTAGTCTCCCAACAGTTTGTCACAGAATTCCTGATCTCTACAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGCTAGTCTCCCAACAGTTTGTCACAGAATTCCTGATCTCTACAA  798

seq1  AGCTGGTGTATGCTTTTGGAGCCCTTAAGAAAAGTTTGCCATTTCCTGCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGTGTATGCTTTTGGAGCCCTTAAGAAAAGTTTGCCATTTCCTGCT  848

seq1  GTGGGCTCTTGGGGTGTTCTGGGTTCAGTTCTGATGTGAGACCCACAGGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCTCTTGGGGTGTTCTGGGTTCAGTTCTGATGTGAGACCCACAGGC  898

seq1  CATTAGCTCTCAGCTAGAGGCATCTGCATTTGGAGAGCTGAGAGCTGACC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGCTCTCAGCTAGAGGCATCTGCATTTGGAGAGCTGAGAGCTGACC  948

seq1  TGTGTTTCACCAGTGTGCTGAATGGCTTGCTATTTTGCTATTGGTTTTTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTCACCAGTGTGCTGAATGGCTTGCTATTTTGCTATTGGTTTTTG  998

seq1  TTTTTGTTTTTGTTTTTGTTTTAATAATATATACTGTTTTAATTTTTTTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTTGTTTTTGTTTTAATAATATATACTGTTTTAATTTTTTTG  1048

seq1  TGAAACGTTTTCCTGTTTCTTACTAAAATTGCTAAGCTTCATCATTTACA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACGTTTTCCTGTTTCTTACTAAAATTGCTAAGCTTCATCATTTACA  1098

seq1  ACATTCCCTTTGCAAAGATCTGTGGAATTC  1127
      ||||||||||||||||||||||||||||||
seq2  ACATTCCCTTTGCAAAGATCTGTGGAATTC  1128