BAC Information

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BAC

Clone NameB6Ng01-297N01
Chromosome19 (Build37)
Map Location 25,964,811 - 25,965,486
singlet/doubletsinglet
Overlap genenone
Upstream geneFoxd4, Cbwd1, Dock8, LOC100042503, Ankrd15, LOC433233, LOC383474, Dmrt1, Dmrt3, Dmrt2, EG667806
Downstream gene1700048O14Rik, LOC100041846, LOC100041857, Smarca2, Gm815
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297N01.bB6Ng01-297N01.g
ACCGA093084GA093085
length1,2001,012
definitionB6Ng01-297N01.b B6Ng01-297N01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctattcaggaattttccccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gactataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatctttcttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacttccttagtagagtcacaccaagatattttatattatt
tgtgactattgagaagggtgttgtttccctatttctttctcagctgttat
tctttgtatagagaaagcatgacttgtttgagttattttatatatccagc
tactcaccggagctgtttatcaggttaggagtctctgggtagatttttaa
ggtcacctttatattacctatccatattcatctggcaaaggttaacttgg
actcctcttccatttggaatcctgtgaatctcctatgttgtggcgtacga

gaattccacctttctaaggcaaactgccaccatcttcctgagttcaactg
agtctgattacagaagaccatcacagttggacttaatgaccatcagcttc
atagaagaaaacttgggagggtcatgggacctttacctggtatccagcca
ttcctcccaacaagatgctgccctcttgtcttgcttaccacaatttctat
tgctatggtaagacatggtgaacaatgcaactcataaaagagtttaattt
ggggatcttagttccagagggttagagttcatgaccatcacattggggag
catggcagcaagcatagaactggaatggtaggtgaaagatcatatcttaa
cacatcgaccggaggtagagagagctaaatgggaatttcatgggctttga
aacctcaaaggccaccccccagtgacacacctccttcaagaaggccttat
ttcctaatccttcccaaatagttctaccaactggggatcacgcattcaaa
tatacaagcctatggagatcatcattattgagataatcacaacctttaaa
cagcatagcttcagctgccactgctcttcccaaactcaacgttgtttttt
tcctaccctgccagctataacaagtgttgttaaaatttcttccagtgtct
acccctcctcttaaagtcccaatggcaattccaccgatgctcattttgga
gaaagcaatgatttcattggtcttacttagctctggcaaggggttacaga
caaaagtctgagtgatctcaaagcagccacactagaagatctgtacttag
catagctggtgactcccacattaataaactcttccctgtctagtccttcc
cagcctatatacttttatcccttccctgaggccatgtgtaattagggcaa
aaaagctacagaagaaatttcacaatgcattctgcccccatgtagcgtgt
agtggtatgcttttggggagtagttgaagtctcatgggtcatgagaagta
atgagatgttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_25964811_25965486
seq2: B6Ng01-297N01.g_66_741 (reverse)

seq1  GCCATTGGGACTTTAAGAGGAGGGGTAGACACTGGAAGAAATTTTAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTGGGACTTTAAGAGGAGGGGTAGACACTGGAAGAAATTTTAACAA  50

seq1  CACTTGTTATAGCTGGCAGGGTAGGAAAAAAACAACGTTGAGTTTGGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTTATAGCTGGCAGGGTAGGAAAAAAACAACGTTGAGTTTGGGAA  100

seq1  GAGCAGTGGCAGCTGAAGCTATGCTGTTTAAAGGTTGTGATTATCTCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTGGCAGCTGAAGCTATGCTGTTTAAAGGTTGTGATTATCTCAAT  150

seq1  AATGATGATCTCCATAGGCTTGTATATTTGAATGCGTGATCCCCAGTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGATCTCCATAGGCTTGTATATTTGAATGCGTGATCCCCAGTTGG  200

seq1  TAGAACTATTTGGGAAGGATTAGGAAATAAGGCCTTCTTGAAGGAGGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTATTTGGGAAGGATTAGGAAATAAGGCCTTCTTGAAGGAGGTGT  250

seq1  GTCACTGGGGGGTGGCCTTTGAGGTTTCAAAGCCCATGAAATTCCCATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGGGGGGTGGCCTTTGAGGTTTCAAAGCCCATGAAATTCCCATTT  300

seq1  AGCTCTCTCTACCTCCGGTCGATGTGTTAAGATATGATCTTTCACCTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCTCTACCTCCGGTCGATGTGTTAAGATATGATCTTTCACCTACC  350

seq1  ATTCCAGTTCTATGCTTGCTGCCATGCTCCCCAATGTGATGGTCATGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGTTCTATGCTTGCTGCCATGCTCCCCAATGTGATGGTCATGAAC  400

seq1  TCTAACCCTCTGGAACTAAGATCCCCAAATTAAACTCTTTTATGAGTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACCCTCTGGAACTAAGATCCCCAAATTAAACTCTTTTATGAGTTGC  450

seq1  ATTGTTCACCATGTCTTACCATAGCAATAGAAATTGTGGTAAGCAAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCACCATGTCTTACCATAGCAATAGAAATTGTGGTAAGCAAGACA  500

seq1  AGAGGGCAGCATCTTGTTGGGAGGAATGGCTGGATACCAGGTAAAGGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGCAGCATCTTGTTGGGAGGAATGGCTGGATACCAGGTAAAGGTCC  550

seq1  CATGACCCTCCCAAGTTTTCTTCTATGAAGCTGATGGTCATTAAGTCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCCTCCCAAGTTTTCTTCTATGAAGCTGATGGTCATTAAGTCCAA  600

seq1  CTGTGATGGTCTTCTGTAATCAGACTCAGTTGAACTCAGGAAGATGGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATGGTCTTCTGTAATCAGACTCAGTTGAACTCAGGAAGATGGTGG  650

seq1  CAGTTTGCCTTAGAAAGGTGGAATTC  676
      ||||||||||||||||||||||||||
seq2  CAGTTTGCCTTAGAAAGGTGGAATTC  676