BAC Information

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BAC

Clone NameB6Ng01-307D21
Chromosome19 (Build37)
Map Location 35,953,326 - 35,954,464
singlet/doubletsinglet
Overlap geneA830019P07Rik
Upstream geneMphosph1, LOC383464, LOC100042292
Downstream geneHtr7, Rpp30, Ankrd1, LOC668195, Pcgf5, LOC668201, Hectd2, LOC668215, Ppp1r3c, Tnks2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307D21.bB6Ng01-307D21.g
ACCGA100064GA100065
length1,1891,145
definitionB6Ng01-307D21.b B6Ng01-307D21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaacaaatg
atcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacagcagtcagaatggctaagatcaaaaatacaggtgacagc
aggtgctggcgaggatgtggagaaagaggaacactcctttattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
ataaatccggatgatgttccaattggtaagaaggacacatgctcccctat
gttcatagcagccttatttataatagccagaagctggaaagaatccagat
gcccctcaacagagaaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggaggggatcatcctgagtgaggtaacccaatcacaaa
tgaactcacatgatatgtactcactgataagtggatattaacccagaaac
ttactatacccaagatataagatacaatttgcaaaacacatgaaactcaa
gaagaatgaagaccaaagtgtggatactttgccccttcttagaattggaa
acaaaacacccatggaaggagttacagagacacagtttggatctgagttg
aaaggatggaacatctagagacggccatacccagggatccatcccataat
cagcctccaaatgctgataccatttcattcactagcaagtttttgctgaa
aggaccctgatatagctgtctcttgtgaggctatgcccggggcctagcaa
acacagaagtggatgctcacagtcagctattggatggatcacagggctcc
caatggaggagctagagaaagcacccaagagctaaaggggtctggaaacc
ctataggtggaacaacaatatgaactaaccaatacacccccctggagctc
atgtctctagctgcatatgaatcagaaagattgccctagcgggcatcatt
gtaagagagctcatgggtcttgccaactttatatctaagttacaggacgc
catgccaaacagtgtgagagtttggtgggtagagcgaga
gaattctggagtacataagatagcctgagaggtaagcagtctgaacattt
tccatgtcttttatattttgaaatagaaattttagaataaatttggttga
agtggtctcattggcttttctcaccagtgatacaaccagatttacagaag
ccatgtttgttctgagctattctgtcatcaatgtgtcttcactgtttact
atctatctgctgggaatacttatctgcatctgtgacacaatactgcgtaa
tataaacaggactggggtctccttatattttaataaatggtaaaattctg
acagctccaaacacatcctgcattttgaagagaaaggagtttgagacccc
agagtaggtatttccaaagactcaattgactttgtagcccactctcaaat
ctcacccatttcttgtgtctaagttaatgtcaggaataatgtcagggatt
ggaatggacatgttactatcaacagatttgtactggttggacgtagtggg
ataaaataggctcacatatcagatgtgctgttcgtcctgtgtcgcttgtg
atttgcatgggtgtatttagtgttcactagcttcttacagtagcatagtt
ataagtgaaaatgtgagacactaacgactgtctactctgccaggagaagg
tagataaacgtgtttggaagttctgtgtaatatagtatgatcattgtgtg
gtgattatttttttaacttgttaaatctgtatgagaaacaatggcttctt
ctccaaatcacaagcagagactcttctctccacaagctcctctaggtaaa
ggactgaccaccaacttctttcatctctgaggccagaaaaaaaaaatgac
gagcagtaaaaatccactccagggatgcagccgctcctcaatgccttagc
tcaggattctggaactgaagtgcctggactgaaatgtttctttccacctt
tagctgtcagtactttccttgagcacttacttagcctctctgtgttattt
ttctcatctcaatatacagatggtaagattgtgctatctcatgatttcca
ttacaagagatgagtatgtaagaccacttagaaagtactttttacacagg
tgcaatgctcagctccaatgtgctaggtatggctcatagaatttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_35953326_35954464
seq2: B6Ng01-307D21.g_65_1209 (reverse)

seq1  CAAA-TCTATGAGCAACA-CTAACAACATGGA-CTGAACA-TGCA-CTGT  45
      |||| ||||||||| | | ||| ||   |||| |||| || |||| ||||
seq2  CAAATTCTATGAGCCATACCTAGCACATTGGAGCTGAGCATTGCACCTGT  50

seq1  GTAAAAGGTACCTTTCT-AGT-GTCTAACATACTCATTCTCTTTGTATGG  93
      |||||| ||| |||||| ||| |||| ||||||||| ||||||   ||||
seq2  GTAAAAAGTA-CTTTCTAAGTGGTCTTACATACTCA-TCTCTTGTAATGG  98

seq1  AAATCATGAGATAGGCACAATCTTACCATCTGTATATTGAGATGAGAAAA  143
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAATCATGAGATA-GCACAATCTTACCATCTGTATATTGAGATGAGAAAA  147

seq1  TTAAACACAGAGAGGCTAAGTAAGTGCTCAAGG-AAGTACTGACAGCT-A  191
       | |||||||||||||||||||||||||||||| |||||||||||||| |
seq2  AT-AACACAGAGAGGCTAAGTAAGTGCTCAAGGAAAGTACTGACAGCTAA  196

seq1  AGGTGGAAAGAAACATTTCAGTCCAGGCACTTCAGTTCCAGAATCCCTGA  241
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGGTGGAAAGAAACATTTCAGTCCAGGCACTTCAGTTCCAGAAT-CCTGA  245

seq1  GCTAAGGCATTGAGGAGCGGCTGCAT-CCTGGAGTGGATTTTTACTGCTC  290
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GCTAAGGCATTGAGGAGCGGCTGCATCCCTGGAGTGGATTTTTACTGCTC  295

seq1  GTCATTTTTTTTTTCTGGCCTCAGAGATG-AAGAAGTTGGTGGTCAGTCC  339
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTCATTTTTTTTTTCTGGCCTCAGAGATGAAAGAAGTTGGTGGTCAGTCC  345

seq1  TTTACCTAGAGGAGCTTGTGGAGAGAAGAGTCTCTGCTTGTGATTTGGAG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTAGAGGAGCTTGTGGAGAGAAGAGTCTCTGCTTGTGATTTGGAG  395

seq1  AAGAAGCCATTGTTTCTCATACAGATTTAACAAGTTAAAAAAATAATCAC  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCCATTGTTTCTCATACAGATTTAACAAGTTAAAAAAATAATCAC  445

seq1  CACACAATGATCATACTATATTACACAGAACTTCCAAACACGTTTATCTA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAATGATCATACTATATTACACAGAACTTCCAAACACGTTTATCTA  495

seq1  CCTTCTCCTGGCAGAGTAGACAGTCGTTAGTGTCTCACATTTTCACTTAT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCCTGGCAGAGTAGACAGTCGTTAGTGTCTCACATTTTCACTTAT  545

seq1  AACTATGCTACTGTAAGAAGCTAGTGAACACTAAATACACCCATGCAAAT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGCTACTGTAAGAAGCTAGTGAACACTAAATACACCCATGCAAAT  595

seq1  CACAAGCGACACAGGACGAACAGCACATCTGATATGTGAGCCTATTTTAT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCGACACAGGACGAACAGCACATCTGATATGTGAGCCTATTTTAT  645

seq1  CCCACTACGTCCAACCAGTACAAATCTGTTGATAGTAACATGTCCATTCC  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTACGTCCAACCAGTACAAATCTGTTGATAGTAACATGTCCATTCC  695

seq1  AATCCCTGACATTATTCCTGACATTAACTTAGACACAAGAAATGGGTGAG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCTGACATTATTCCTGACATTAACTTAGACACAAGAAATGGGTGAG  745

seq1  ATTTGAGAGTGGGCTACAAAGTCAATTGAGTCTTTGGAAATACCTACTCT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGAGTGGGCTACAAAGTCAATTGAGTCTTTGGAAATACCTACTCT  795

seq1  GGGGTCTCAAACTCCTTTCTCTTCAAAATGCAGGATGTGTTTGGAGCTGT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCTCAAACTCCTTTCTCTTCAAAATGCAGGATGTGTTTGGAGCTGT  845

seq1  CAGAATTTTACCATTTATTAAAATATAAGGAGACCCCAGTCCTGTTTATA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTTTACCATTTATTAAAATATAAGGAGACCCCAGTCCTGTTTATA  895

seq1  TTACGCAGTATTGTGTCACAGATGCAGATAAGTATTCCCAGCAGATAGAT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGCAGTATTGTGTCACAGATGCAGATAAGTATTCCCAGCAGATAGAT  945

seq1  AGTAAACAGTGAAGACACATTGATGACAGAATAGCTCAGAACAAACATGG  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACAGTGAAGACACATTGATGACAGAATAGCTCAGAACAAACATGG  995

seq1  CTTCTGTAAATCTGGTTGTATCACTGGTGAGAAAAGCCAATGAGACCACT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTAAATCTGGTTGTATCACTGGTGAGAAAAGCCAATGAGACCACT  1045

seq1  TCAACCAAATTTATTCTAAAATTTCTATTTCAAAATATAAAAGACATGGA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCAAATTTATTCTAAAATTTCTATTTCAAAATATAAAAGACATGGA  1095

seq1  AAATGTTCAGACTGCTTACCTCTCAGGCTATCTTATGTACTCCAGAATTC  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTCAGACTGCTTACCTCTCAGGCTATCTTATGTACTCCAGAATTC  1145