MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-308H14
Chromosome	19 (Build37)	1 (Build37)
Map Location	27,261,713 - 27,262,824	25,525,117 - 25,525,223
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	1700048O14Rik, LOC100041846, LOC100041857, Smarca2, Gm815, LOC100042576
Downstream gene	Vldlr, LOC100042588, Kcnv2, D19Bwg1357e, LOC667868, LOC100042612, Rfx3, LOC666997, LOC433235
Link	Open Mouse BAC browser

Click to get alignment info.

name	1700048O14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73433 MGI:1920683
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041846 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041846
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100041857 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041857
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	Smarca2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67155 MGI:99603
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gm815 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329047 MGI:2685661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042576 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042576
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Vldlr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22359 MGI:98935
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042588 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042588
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	Kcnv2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240595 MGI:2670981
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D19Bwg1357e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52874 MGI:106253
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667868 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667868
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC100042612 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042612
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Rfx3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19726 MGI:106582
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666997 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666997
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins pseudo : _no_value

name	LOC433235 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433235
definition	note : peptidylprolyl isomerase A pseudogene chr19_428.1 pseudo : _no_value

name	1700048O14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270408 GeneID:73433 MGI:1920683
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700048O14 gene transcript_id : XM_001477095.1

name	LOC100041846 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270410 GeneID:100041846
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100041846 transcript_id : XM_001477110.1

name	LOC100041857 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270412 GeneID:100041857
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : similar to 60S ribosomal protein L36 transcript_id : XM_001477124.1

name	Smarca2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51593083 GeneID:67155 MGI:99603
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 transcript_id : NM_011416.2

name	Smarca2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51593082 GeneID:67155 MGI:99603
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 transcript_id : NM_026003.2

name	Gm815 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802721 GeneID:329047 MGI:2685661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 815, (NCBI) transcript_id : NM_001033407.2

name	LOC100042576 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270472 GeneID:100042576
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042576 transcript_id : XM_001478573.1

name	Vldlr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305628 GeneID:22359 MGI:98935
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : very low density lipoprotein receptor transcript_id : NM_013703.1

name	LOC100042588 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270474 GeneID:100042588
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : hypothetical protein LOC100042588 transcript_id : XM_001478609.1

name	Kcnv2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34147231 GeneID:240595 MGI:2670981
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium channel, subfamily V, member 2 transcript_id : NM_183179.1

name	D19Bwg1357e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377658 GeneID:52874 MGI:106253
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed transcript_id : NM_177474.4

name	LOC100042612 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270476 GeneID:100042612
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100042612 transcript_id : XM_001478637.1

name	Rfx3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328188 GeneID:19726 MGI:106582
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulatory factor X, 3 (influences HLA class II expression) transcript_id : NM_011265.2

name	1700048O14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270409 GeneID:73433 MGI:1920683
definition	codon_start : 1 product : hypothetical protein LOC73433 protein_id : XP_001477145.1

name	LOC100041846 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270411 GeneID:100041846
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477160.1

name	LOC100041857 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270413 GeneID:100041857
definition	codon_start : 1 product : similar to 60S ribosomal protein L36 protein_id : XP_001477174.1

name	Smarca2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51593084 CCDS:CCDS29720.1 GeneID:67155 MGI:99603
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0016514 - SWI/SNF complex [Evidence TAS] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006325 - establishment and/or maintenance of chromatin architecture [Evidence TAS]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0006334 - nucleosome assembly [Evidence TAS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; subunit of the SWI/SNF chromatin remodeling complex product : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 isoform 1 protein_id : NP_035546.2

name	Smarca2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313112 GeneID:67155 MGI:99603
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0016514 - SWI/SNF complex [Evidence TAS] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006325 - establishment and/or maintenance of chromatin architecture [Evidence TAS]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0006334 - nucleosome assembly [Evidence TAS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; subunit of the SWI/SNF chromatin remodeling complex product : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 isoform 2 protein_id : NP_080279.1

name	Gm815 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701913 GeneID:329047 MGI:2685661
definition	codon_start : 1 product : hypothetical protein LOC329047 protein_id : NP_001028579.1

name	LOC100042576 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270473 GeneID:100042576
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478623.1

name	Vldlr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305629 CCDS:CCDS29721.1 GeneID:22359 MGI:98935
definition	GO_component : GO:0005905 - coated pit [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005319 - lipid transporter activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0008203 - cholesterol metabolism [Evidence IEA]; GO:0006897 - endocytosis [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0006869 - lipid transport [Evidence IEA]; GO:0045860 - positive regulation of protein kinase activity [Evidence IGI]; GO:0008202 - steroid metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : very low density lipoprotein receptor protein_id : NP_038731.1

name	LOC100042588 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270475 GeneID:100042588
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478659.1

name	Kcnv2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34147232 CCDS:CCDS29722.1 GeneID:240595 MGI:2670981
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : potassium channel, subfamily V, member 2 protein_id : NP_899002.1

name	D19Bwg1357e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29126213 CCDS:CCDS29723.1 GeneID:52874 MGI:106253
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : D19Bwg1357e protein protein_id : NP_803425.1

name	LOC100042612 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270477 GeneID:100042612
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478687.1

name	Rfx3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328189 CCDS:CCDS29725.1 GeneID:19726 MGI:106582
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence ISS] GO_process : GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0016481 - negative regulation of transcription [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : regulatory factor X, 3 (influences HLA class II expression) protein_id : NP_035395.2

name	LOC667868 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667868
definition	number : 1 pseudo : _no_value

name	LOC666997 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270478 GeneID:666997
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins product : similar to ribosomal protein L29 pseudo : _no_value transcript_id : XR_033825.1

clone name	MSMg01-502F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115B03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-349F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519F08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-293D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519E21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-050O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214H20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-391M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057H07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-308H14.b	B6Ng01-308H14.g
ACC	GA100967	GA100968
length	1,104	141
definition	B6Ng01-308H14.b	B6Ng01-308H14.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(27,261,713 - 27,262,824)	(25,525,117 - 25,525,223)
sequence	gaattcacagcctgaccaggtaatggggcatggccactttccttctcagt aagttgagaacagaacaaagatccagggcctaaatgggaaccctggatga gagtctacatgacggctagtaaaacagaatttgaactcacatctccatct aaaaagaaggtaagcattctttgactgtcacaattatgcaaaggataaaa tgatcattagcatgccagcataaaagagcactgccccttaccattgagcc tcactaccacccagccaatctttggggatttaaaaatttgatagatgagt tttaggattaagcctaaattttgttctttcttgtggcttcgtctttgaat gccacaaaggaaaccaaagcctccagaaagattcaagaaagagacatttc tctacccttccatggtcagaaagcggagccacttctcatctacaaacact cccagaaactacttagaagcctgcggtacaggaggaaccacacagatcgc ttctgtaagaaaagtcaaggtgtcagactaaagcttgctctgagtcactg tcgcaagggaagctaacctcaaaacatcggattgaacacgatgacccttc tcagatggctttctctgggaaaggccacactggtttatctcctgtgttga cggtaaaggatctgcctggattttattttgtaagctggtcctgggcacac tgctaagaaacactctataagctttttcttccgaacatgatctatctcta tcccggtcagatggggctggaattatagtcacagggctttgtaaagaaga tgccaaggagcctgtaataggagttagcttcaaaggaagttcctttccat gggtgctttcaaggcccagaacatgtgacacctgaaaaagatgaacttgg gaattctagggcacaaataaactagatcctgcttttgtgcttaattcaag gtcaaatgtgtaattccgaggggttttttttttcacataattccatagat ttaaaataactttgagtagcttcatgatggtgggtgcatgcatgctttgc tccagcaggtaggagcagagtagtggatctttgtgagttgaggcaggctg acct	cagggggatctggcctgttgacagtgttgctccctccatggggctgcaaa cctcctcagcttctcctctcctccctctccctctccctctccctctccct ctccctctctctctctctctctctctctctctctctctctc
quality values	Open. Hide. 58 34 27 39 58 30 27 54 34 62 62 62 62 49 22 38 37 37 62 62 49 62 62 47 62 49 62 54 62 62 59 56 23 31 34 19 22 27 27 23 23 23 23 25 34 43 59 49 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 59 30 43 49 34 46 46 46 46 50 50 62 59 56 59 62 62 62 62 59 59 54 59 62 62 62 59 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 59 62 59 54 54 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 51 56 56 46 56 56 62 62 44 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 56 62 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 56 62 62 62 56 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 53 52 58 58 58 58 54 54 54 58 58 58 58 58 58 54 58 58 54 54 58 54 54 54 58 58 58 58 54 58 58 58 38 36 49 58 58 54 58 58 54 58 54 58 54 54 54 58 58 58 54 52 58 58 58 58 46 41 58 58 58 58 51 51 54 50 58 51 54 45 44 47 54 49 54 54 58 53 53 53 58 52 58 58 50 58 58 58 51 58 52 58 58 58 53 58 58 58 50 49 32 51 50 52 52 58 49 58 58 58 58 47 51 49 51 53 50 58 50 58 51 58 50 49 51 46 40 49 58 38 53 58 51 39 58 41 37 52 58 54 47 54 50 54 46 42 40 58 51 46 50 51 54 54 54 54 42 44 35 40 52 53 50 51 42 45 53 51 49 54 54 49 29 41 30 51 47 54 50 44 40 46 31 54 52 40 45 45 35 54 42 42 52 53 37 51 40 40 51 54 54 54 39 35 31 47 27 51 29 51 51 40 32 42 53 41 38 46 41 52 34 53 52 53 45 42 35 32 40 40 31 51 33 45 42 32 34 25 51 49 49 51 30 31 38 38 41 45 52 52 40 40 42 30 31 37 30 40 31 39 51 46 28 42 51 40 40 30 31 51 42 31 33 51 29 31 17 31 30 30 31 38 30 28 16 12 32 33 27 40 26 24 35 32 43 25 27 41 21 24 43 32 29 31 31 32 32 31 46 41 32 42 29 31 31 42 27 31 37 31 47 32 19 29 19 30 32 46 36 29 37 32 30 48 31 33 25 22 21 30 27 38 22 27 18 33 27 27 24 27 37 31 32 30 21 23 18 18 17 26 30 47 47 48 35 19 31 23 31 31 30 38 27 31 31 48 31 30 33 31 32 32 31 23 30 47 26 21 24 14 25 41 23 38 33 48 33 32 34 32 31 32 32 18 30 22 34 32 34 48 43 30 17 23 32 23 11 25 13 12 27 22 21 15 22 25 25 9 29 21 37 26 21 29 20 30 33 15 19 11 25 10 19 19 31 11 48 43 24 13 47 47 47 47 47 47 40 47 26 20 16 4 4 13 9 24 21 19 11 21 20 14 20 5 11 15 47 8 14 31 34 6 6 4 7 9 23 38 15 11 20 11 13 20 10 28 11 15 19 20 24 24 20 7 21 11 7 15 47 11 13 27 24 20 16 20 21 9 10 6 11 3 20 17 11 20 17 21 22 10 15 17 9 6 4 10 7 14 8 10 3 5 9 4 15 4 5 11 3 8 7 16 6 9 5 8 28 10 15 12 10 11 4 5 6 6 5 6 13 9 3 6 4 23 6 18 22 8 9 7	Open. Hide. 43 36 62 62 15 16 11 5 6 10 9 12 14 8 10 8 18 10 12 34 38 34 49 59 59 59 62 62 59 62 62 62 62 62 62 62 59 49 62 62 62 62 59 62 59 59 51 43 49 24 34 37 23 23 18 18 21 34 30 18 27 30 30 50 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 56 56 59 45 43 45 27 34 39 32 28 38 20 38 39 27 31 38 30 38 31 38 51 51 50 50 50 50 50 56 26 33 51 31 38 31 14 20 15 11 20 14 14 12

Alignment Information

BAC End 1

BAC End 2

seq1: chr19_27261713_27262824
seq2: B6Ng01-308H14.b_48_1151

seq1  GAATTCACAGCCTGACCAGGTAATGGGGCATGGCCACTTTCCTTCTCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCCTGACCAGGTAATGGGGCATGGCCACTTTCCTTCTCAGT  50

seq1  AAGTTGAGAACAGAACAAAGATCCAGGGCCTAAATGGGAACCCTGGATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGAGAACAGAACAAAGATCCAGGGCCTAAATGGGAACCCTGGATGA  100

seq1  GAGTCTACATGACGGCTAGTAAAACAGAATTTGAACTCACATCTCCATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTACATGACGGCTAGTAAAACAGAATTTGAACTCACATCTCCATCT  150

seq1  AAAAAGAAGGTAAGCATTCTTTGACTGTCACAATTATGCAAAGGATAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAGGTAAGCATTCTTTGACTGTCACAATTATGCAAAGGATAAAA  200

seq1  TGATCATTAGCATGCCAGCATAAAAGAGCACTGCCCCTTACCATTGAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATTAGCATGCCAGCATAAAAGAGCACTGCCCCTTACCATTGAGCC  250

seq1  TCACTACCACCCAGCCAATCTTTGGGGATTTAAAAATTTGATAGATGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTACCACCCAGCCAATCTTTGGGGATTTAAAAATTTGATAGATGAGT  300

seq1  TTTAGGATTAAGCCTAAATTTTGTTCTTTCTTGTGGCTTCGTCTTTGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGATTAAGCCTAAATTTTGTTCTTTCTTGTGGCTTCGTCTTTGAAT  350

seq1  GCCACAAAGGAAACCAAAGCCTCCAGAAAGATTCAAGAAAGAGACATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAAAGGAAACCAAAGCCTCCAGAAAGATTCAAGAAAGAGACATTTC  400

seq1  TCTACCCTTCCATGGTCAGAAAGCGGAGCCACTTCTCATCTACAAACACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCCTTCCATGGTCAGAAAGCGGAGCCACTTCTCATCTACAAACACT  450

seq1  CCCAGAAACTACTTAGAAGCCTGCGGTACAGGAGGAACCACACAGATCGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAAACTACTTAGAAGCCTGCGGTACAGGAGGAACCACACAGATCGC  500

seq1  TTCTGTAAGAAAAGTCAAGGTGTCAGACTAAAGCTTGCTCTGAGTCACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAAGAAAAGTCAAGGTGTCAGACTAAAGCTTGCTCTGAGTCACTG  550

seq1  TCGCAAGGGAAGCTAACCTCAAAACATCGGATTGAACACGATGACCCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAAGGGAAGCTAACCTCAAAACATCGGATTGAACACGATGACCCTTC  600

seq1  TCAGATGGCTTTCTCTGGGAAAGGCCACACTGGTTTATCTCCTGTGTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGGCTTTCTCTGGGAAAGGCCACACTGGTTTATCTCCTGTGTTGA  650

seq1  CGGTAAAGGATCTGCCTGGATTTTATTTTGTAAGCTGGTCCTGGGCACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTAAAGGATCTGCCTGGATTTTATTTTGTAAGCTGGTCCTGGGCACAC  700

seq1  TGCTAAGAAACACTCTATAAGCTTTTTCTTCCGAACATGATCTATCTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAGAAACACTCTATAAGCTTTTTCTTCCGAACATGATCTATCTCTA  750

seq1  TCCCGGTCAGATGGGGCTGGAATTATAGTCACAGGGCTTTGTAAAGAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGTCAGATGGGGCTGGAATTATAGTCACAGGGCTTTGTAAAGAAGA  800

seq1  TGCCAAGGAGCCTGTAATAGGAGTTAGCTTCAAAGGAAGTTCCTTTCCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGGAGCCTGTAATAGGAGTTAGCTTCAAAGGAAGTTCCTTTCCAT  850

seq1  GGGTGCTTTCAAGGCCCAGAACATGTGACACCTGAAAAAGATGAACTTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCTTTCAAGGCCCAGAACATGTGACACCTGAAAAAGATGAACTTGG  900

seq1  GAATTCTAGGGCACAAATAAACTAGATCCTGCTTTTGTGCTTAATTCAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGGCACAAATAAACTAGATCCTGCTTTTGTGCTTAATTCAAG  950

seq1  GTCAAATGTGTAATTCCGAGGGGTTTTTTTTTTTCAACATAATTCCATAG  1000
      |||||||||||||||||||||||||||||||||   ||||||||||||||
seq2  GTCAAATGTGTAATTCCGAGGGGTTTTTTTTTT--CACATAATTCCATAG  998

seq1  ATTTAAAAT-ACTTTGAAGTAGCTTCATGATGGT-GGTGCATGCATGCCT  1048
      ||||||||| |||||| ||||||||||||||||| |||||||||||| ||
seq2  ATTTAAAATAACTTTG-AGTAGCTTCATGATGGTGGGTGCATGCATG-CT  1046

seq1  TTGCTCCCAGCAGTTAGGAGGCAGAAGTAAGTGGATCTTTGTGAGTTTGA  1098
      ||||| ||||||| ||||| |||| ||| |||||||||||||||| ||||
seq2  TTGCT-CCAGCAGGTAGGA-GCAG-AGT-AGTGGATCTTTGTGAG-TTGA  1091

seq1  GGCCAGCCTGACCT  1112
      || ||| |||||||
seq2  GG-CAGGCTGACCT  1104

seq1: chr1_25525117_25525223
seq2: B6Ng01-308H14.g_132_211 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGAGGGG  50
      ||||||||||||||||||||||||||||||||||||||||          
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGA----------  40

seq1  GAGGTGAAGGGGGAGGGGGAGGGAGAGAGAGAGGGAGAGGGAGAGGGGGG  100
                        ||||||||| ||||||||||||||||||| ||
seq2  ------------------GAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGG  72

seq1  AG-GGAGA  107
      || |||||
seq2  AGAGGAGA  80

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information