BAC Information

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BAC

Clone NameB6Ng01-310J22
Chromosome19 (Build37)
Map Location 9,756,736 - 9,757,476
singlet/doubletsinglet
Overlap geneLOC100040192
Upstream geneSlc3a2, Snord22, Wdr74, 1700092M07Rik, Stx5a, LOC100039902, Nxf1, 0610006I08Rik, 1810059G22Rik, Taf6l, LOC100039957, Polr2g, Zbtb3, Ttc9c, Hnrpul2, Gng3, Bscl2, 1110067I12Rik, D19Ertd721e, AI462493, 1810009A15Rik, Ints5, Ganab, B3gat3, Rom1, Eml3, Mta2, Tut1, Eef1g, Ahnak, Scgb1a1, Asrgl1, EG621699, LOC100040104, LOC623810, Pcna-ps2, LOC100040130, LOC100040137, LOC100040143, LOC100040152, Stxbp3b, LOC623688, LOC100040178
Downstream gene6720475J19Rik, LOC100040203, Incenp, LOC100040215, Fth1, Best1, Rab3il1, Fads3, Fads2, LOC100040227, Fads1, Fen1, 1810006K21Rik, Gm98, Dagla, Syt7, Gm705, 4930579J09Rik, 0610038F07Rik, 5730453I16Rik, 2810441K11Rik, Tmem138, Cybasc3, Dak, Ddb1, Vwce, Pga5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310J22.bB6Ng01-310J22.g
ACCGA102549GA102550
length1,006787
definitionB6Ng01-310J22.b B6Ng01-310J22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaagaacatttctcatgggataagactgtcagccgcaccatta
ttgtgaggttttggctttcttaatttgcaaagggaacattatttctggat
aggacattatcaattgaatgctcagataaagagcatcattatctgtcctg
agatatcatagagaaaacatgccctcttgcttttcacttctatccacgga
gagtgtttttgtttgtttattttttaatgaatgagagtcatcctgtcctg
gcattcccctacacaggggcatcgaggtttcttaagaccaagggcctctc
ctcccaatgatatcgaacaaggccatcctctgctacaaatgcagctggag
ccataggtccctccatgtgtactatttggttggtggtttagtccctggga
gctctggggctactggttggttcatgctgttgttcttcctatctggctgc
aagctccttcagctgcttgggtcctttctttagcttctctaatggggtcc
ttatgctaagtccaatgattggctaagagcatccacctttgtatttgtca
ggcactggaagagcctctcaggagacagctatatcaggctcctgtctgca
agcacttgttggcatccacagtagtgtctgggtttggtggcagtatgtga
gatggatgccaaggtggagcagtctctggatggcctttccttcagtctct
gcttgacactctgtctctaactcctcccatgggtattctgttcccctttc
taaggagaaccagagtaatcatactttggccttccttccttgagcttcat
ttgttctgtgaattgtacattgggtattccaagcatctgagctaatattc
acctatcagtgagtatataccatgtgtgttctgttctgattgggttacct
cactcgaaatgatattttcaacttccctcatttgcctaaggatgtcatga
attcattgtttttaatagccaagtagtacactgttgtgtgaatgtaacac
attttc
gaattcacaactgaggatcttggatggctgagaaacataaagaaatgttc
aaagtccgtagtgatcagaaaaatgcaaattaaaatgaccctgagattcc
acttacaccaatcagaatggctaagatcaaaacctcaggtgacagcccat
gttggagaggatgaggagaaagaagaaaacgcctccattgctggtgggat
tgcaatctggtacaaccactctggaaatcaatctggtggttcctcagaaa
attgcaaattttctgaagacccatctataccactcttgggaatataccca
aaagatgccccaccatgctacaggggcatgtgttccacaatgttcatagc
agccttatttgtgatagccagaagctggaaacaacctagatgtctcacaa
cagaagaatgtatacagaaaatgtggttcatttacacaacggaatactac
tcagctattaagaacgtggacatcctgacttttgcaggcaactggatgga
actagaaaatatcatcctgagtagggtaactcagacctgagaggacatgc
atggtatgcactcactaataagtggatattaggaaaaaaaataaaagaaa
agaagagaaaaaaagaaaaaaaaaccatacagaatacacaagatacagtt
cacagaattcaaaaggctcaacaagctgaagtgcccaagtgaggatgcct
cagtcccacttgggagagagaagaaagcaatcacaagtagtgagggaggg
agggacttgggaggtaaagtggacggggtagggagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_9756736_9757476
seq2: B6Ng01-310J22.b_44_784

seq1  GAATTCTAAAGAACATTTCTCATGGGATAAGACTGTCAGCCGCACCATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAGAACATTTCTCATGGGATAAGACTGTCAGCCGCACCATTA  50

seq1  TTGTGAGGTTTTGGCTTTCTTAATTTGCAAAGGGAACATTATTTCTGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGGTTTTGGCTTTCTTAATTTGCAAAGGGAACATTATTTCTGGAT  100

seq1  AGGACATTATCAATTGAATGCTCAGATAAAGAGCATCATTATCTGTCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATTATCAATTGAATGCTCAGATAAAGAGCATCATTATCTGTCCTG  150

seq1  AGATATCATAGAGAAAACATGCCCTCTTGCTTTTCACTTCTATCCACGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCATAGAGAAAACATGCCCTCTTGCTTTTCACTTCTATCCACGGA  200

seq1  GAGTGTTTTTGTTTGTTTATTTTTTAATGAATGAGAGTCATCCTGTCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTTTTTGTTTGTTTATTTTTTAATGAATGAGAGTCATCCTGTCCTG  250

seq1  GCATTCCCCTACACAGGGGCATCGAGGTTTCTTAAGACCAAGGGCCTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCCCCTACACAGGGGCATCGAGGTTTCTTAAGACCAAGGGCCTCTC  300

seq1  CTCCCAATGATATCGAACAAGGCCATCCTCTGCTACAAATGCAGCTGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAATGATATCGAACAAGGCCATCCTCTGCTACAAATGCAGCTGGAG  350

seq1  CCATAGGTCCCTCCATGTGTACTATTTGGTTGGTGGTTTAGTCCCTGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGGTCCCTCCATGTGTACTATTTGGTTGGTGGTTTAGTCCCTGGGA  400

seq1  GCTCTGGGGCTACTGGTTGGTTCATGCTGTTGTTCTTCCTATCTGGCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGGGCTACTGGTTGGTTCATGCTGTTGTTCTTCCTATCTGGCTGC  450

seq1  AAGCTCCTTCAGCTGCTTGGGTCCTTTCTTTAGCTTCTCTAATGGGGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCTTCAGCTGCTTGGGTCCTTTCTTTAGCTTCTCTAATGGGGTCC  500

seq1  TTATGCTAAGTCCAATGATTGGCTAAGAGCATCCACCTTTGTATTTGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTAAGTCCAATGATTGGCTAAGAGCATCCACCTTTGTATTTGTCA  550

seq1  GGCACTGGAAGAGCCTCTCAGGAGACAGCTATATCAGGCTCCTGTCTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTGGAAGAGCCTCTCAGGAGACAGCTATATCAGGCTCCTGTCTGCA  600

seq1  AGCACTTGTTGGCATCCACAGTAGTGTCTGGGTTTGGTGGCAGTATGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTGTTGGCATCCACAGTAGTGTCTGGGTTTGGTGGCAGTATGTGA  650

seq1  GATGGATGCCAAGGTGGAGCAGTCTCTGGATGGCCTTTCCTTCAGTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATGCCAAGGTGGAGCAGTCTCTGGATGGCCTTTCCTTCAGTCTCT  700

seq1  GCTTGACACTCTGTCTCTAACTCCTCCCATGGGTATTCTGT  741
      |||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGACACTCTGTCTCTAACTCCTCCCATGGGTATTCTGT  741