BAC Information

Click to search

BAC

Clone NameB6Ng01-310P07
Chromosome19 (Build37)
Map Location 7,249,543 - 7,430,429
singlet/doubletdoublet
Overlap geneD930010J01Rik, Otub1, Cox8a, Nat11, Rcor2, Mark2
Upstream gene1810013C15Rik, Ehd1, Cdc42bpg, Men1, Map4k2, Sf1, Pygm, Rasgrp2, Nrxn2, Slc22a12, LOC629372, Rps6ka4, Ccdc88, Prdx5, 0610038D11Rik, Esrra, 1700019N12Rik, Kcnk4, Gpr137, Bad, Plcb3, Ppp1r14b, Fkbp2, Vegfb, Dnajc4, Nudt22, Trpt1, BC032204, Stip1, Flrt1
Downstream geneAI846148, EG665419, 2700081O15Rik, Rtn3, LOC100039547, 5730596K20Rik, Hrasls3, Lgals12, Hrasls5, LOC433217, Slc22a19, LOC666543, BC014805, LOC632903, AB056442, LOC620946, LOC623030, 9530053H05Rik, EG434674, LOC100039705, D630002G06Rik, EG633120, EG666601, LOC100039749, C730048C13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310P07.bB6Ng01-310P07.g
ACCGA102795GA102796
length1,1351,091
definitionB6Ng01-310P07.b B6Ng01-310P07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,429,325 - 7,430,429)(7,249,543 - 7,250,610)
sequence
gaattcaggagacagacagataaataggcagctcagagagttctgagacc
agcctagtctacagagtcacaaaacacagacaggtggagtaagggagcta
aaaagatggcttggcttagggttaaggatgctcgcagccgggcagtggta
gcatactcctttaatcccagcacttgggaggtagaggcaagttgatctct
gagacttgagaccagcctgatctaaagagcaagttctaggatgaccagaa
ctacacagaaaaagccaatcagttgatggctggagagatggctcagtggt
taagagcactgactgctcttccagaggttctgagttcaattcccagcaac
cacatggcggctcacaaccatctgtaatgggatcagattccctcttctcc
tgtgtctgaagacagagctacagtgtattcatgtacgtaaaataaataaa
ttgggttttttgttttgttttggttttggtttttcgagacagggtttctc
tgtgtagccctggctgtcctggaactcactctgtagaccaggctggcctt
gaactcagaaatccacctgcctctgcctcctaagagctgagattaaaggc
gtgcgtgcgccaccactgcctggctaaaataaataaatcttaaaaacaaa
acaaaacacacacacacaacaataagtgctgctttttatagcactcaaac
caagtgatccactatgcctgtaactcaagctctgggggagctggcactct
ctggccactgcatatacaagacggacataaataaaagtaatttttaaaag
tgaaaaacatggctagagagatggctgtggttcaaagcacttgctactct
tgtagaggaactgagtttgattcctagctcccacatcaggtggctcacag
ttcacctgtgagttttggttctcagggcatctgccagcctttcttgcctc
tatggagccacctggctcgcggtggtataacataatacatacaacggtaa
cttttctggacttgggctatgggcactcaccataatggcaaaggatgttg
ggttaacttttgcttggcgtgagttttattttagggcttatgctaacccc
agacctatgaaataagtatggaggcgtctgtcctt
gaattctagggcaggcagggctaacagagataactctgtcttgaaaaacc
aaaccaaaccagaaccaaaccaaaccagaaaaagcaataatatgtcatct
cagcatcagagagggtaaggcagtaggccagcgtgggctaacaagcaaga
ccccgtctgcagaaagatttttttttttaaattgcatatgcaatttcatg
gttctgacatgtctaagaggaggcacctcactgaaacagtgtatgtttgt
ttgttgagacagggtctctatcctagtctggccttaactctagatcctcc
tgcctcccttcatcaccccaggactgaggttatgagggtgcaccactgtg
cctggtttctgcagtgctggagactgagtgtaggcaagccttcatgcaca
catgctaggtaaggatactgtgaatggttacatccctggcccatatgatg
ggtttgttaggcttggggggtaggtctgttgctgttgctgtaattgaatc
ccggaggctgagtaacttagaaggaacagagacttacttccatggtggtt
ctgcagcctgggaatgccagggtaagggccttgtgctttgtccttatggg
gcctgcagcatctcttggcaagacaaagcaaggcgacagcttcagtggct
cttcctcttagaaagccactcatgtcgttgagtatggtggcccataccta
taaccccagcacttaggaggtgccagcaggaggatcagaacttccaggcc
agttaacagctttcctcacagacccatcagcactttaattagcacgtgtt
tcaggtctccgctacaaggctagttttgaagccagcctgagctacaggtg
accccgtctcaaaactcaaaaccaccaccattcaccaccacaacaaaaca
cccaagggttttatcctttttaaaaaaagctaaaggctcagaatagagca
gaaggccccacctggaggtcacctgttcttttggccatagtaggggcctc
cctaaacatagcttaagcaggagggcttcagaacgagctcttggggatcc
ccatcagcaacttgattaagggatctgttagccttgccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_7429325_7430429
seq2: B6Ng01-310P07.b_50_1184 (reverse)

seq1  AAGGACAGACGCTCCAATACT--ATTCATA-GTCTGGG--TAGCATAGGC  45
      ||||||||||||  | |||||   |||||| |||||||  ||||||| ||
seq2  AAGGACAGACGCCTCCATACTTATTTCATAGGTCTGGGGTTAGCATAAGC  50

seq1  CATAA---TAAACTCA--GCAAGC-AAAGTTAA--CAACATCCTT--GCA  85
      | |||    |||||||   ||||| ||||||||  ||||||||||   ||
seq2  CCTAAAATAAAACTCACGCCAAGCAAAAGTTAACCCAACATCCTTTGCCA  100

seq1  TTAT-GTGAGTG-CCATAG-CCAAGTCCAG-AAAGTTAC--GTGTATGTA  129
      |||| ||||||| |||||| |||||||||| ||||||||   ||||||||
seq2  TTATGGTGAGTGCCCATAGCCCAAGTCCAGAAAAGTTACCGTTGTATGTA  150

seq1  -TATG-TATACCA-CGCGAG-CAGGT-GCT-CATAGAGGCAAG-AAGGCT  172
       |||| ||||||| |||||| ||||| ||| |||||||||||| ||||||
seq2  TTATGTTATACCACCGCGAGCCAGGTGGCTCCATAGAGGCAAGAAAGGCT  200

seq1  GGCAGGTGCCCTGAGAA-CTAAACTCACAGGTG-ACTGTGAGCCACCTGA  220
      ||||| ||||||||||| | ||||||||||||| ||||||||||||||||
seq2  GGCAGATGCCCTGAGAACCAAAACTCACAGGTGAACTGTGAGCCACCTGA  250

seq1  TGTGGGAGCTAGGAATCAAACTCAGTTCCTCTACAAGAGTAGCAAGTGCT  270
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAGCTAGGAATCAAACTCAGTTCCTCTACAAGAGTAGCAAGTGCT  300

seq1  TTGAACCACAGCCATCTCTCTAGCCATGTTTTTCACTTTTAAAAATTACT  320
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACCACAGCCATCTCTCTAGCCATGTTTTTCACTTTTAAAAATTACT  350

seq1  TTTATTTATGTCCGTCTTGTATATGCAGTGGCCAGAGAGTGCCAGCTCCC  370
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATGTCCGTCTTGTATATGCAGTGGCCAGAGAGTGCCAGCTCCC  400

seq1  CCAGAGCTTGAGTTACAGGCATAGTGGATCACTTGGTTTGAGTGCTATAA  420
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCTTGAGTTACAGGCATAGTGGATCACTTGGTTTGAGTGCTATAA  450

seq1  AAAGCAGCACTTATTGTTGTGTGTGTGTGTTTTGTTTTGTTTTTAAGATT  470
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGCACTTATTGTTGTGTGTGTGTGTTTTGTTTTGTTTTTAAGATT  500

seq1  TATTTATTTTAGCCAGGCAGTGGTGGCGCACGCACGCCTTTAATCTCAGC  520
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTTAGCCAGGCAGTGGTGGCGCACGCACGCCTTTAATCTCAGC  550

seq1  TCTTAGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAGGCCAGCCTGGTC  570
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAGGCCAGCCTGGTC  600

seq1  TACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTC  620
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTC  650

seq1  GAAAAACCAAAACCAAAACAAAACAAAAAACCCAATTTATTTATTTTACG  670
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACCAAAACCAAAACAAAACAAAAAACCCAATTTATTTATTTTACG  700

seq1  TACATGAATACACTGTAGCTCTGTCTTCAGACACAGGAGAAGAGGGAATC  720
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGAATACACTGTAGCTCTGTCTTCAGACACAGGAGAAGAGGGAATC  750

seq1  TGATCCCATTACAGATGGTTGTGAGCCGCCATGTGGTTGCTGGGAATTGA  770
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCCATTACAGATGGTTGTGAGCCGCCATGTGGTTGCTGGGAATTGA  800

seq1  ACTCAGAACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCT  820
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCT  850

seq1  CTCCAGCCATCAACTGATTGGCTTTTTCTGTGTAGTTCTGGTCATCCTAG  870
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCCATCAACTGATTGGCTTTTTCTGTGTAGTTCTGGTCATCCTAG  900

seq1  AACTTGCTCTTTAGATCAGGCTGGTCTCAAGTCTCAGAGATCAACTTGCC  920
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGCTCTTTAGATCAGGCTGGTCTCAAGTCTCAGAGATCAACTTGCC  950

seq1  TCTACCTCCCAAGTGCTGGGATTAAAGGAGTATGCTACCACTGCCCGGCT  970
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTCCCAAGTGCTGGGATTAAAGGAGTATGCTACCACTGCCCGGCT  1000

seq1  GCGAGCATCCTTAACCCTAAGCCAAGCCATCTTTTTAGCTCCCTTACTCC  1020
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGCATCCTTAACCCTAAGCCAAGCCATCTTTTTAGCTCCCTTACTCC  1050

seq1  ACCTGTCTGTGTTTTGTGACTCTGTAGACTAGGCTGGTCTCAGAACTCTC  1070
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTCTGTGTTTTGTGACTCTGTAGACTAGGCTGGTCTCAGAACTCTC  1100

seq1  TGAGCTGCCTATTTATCTGTCTGTCTCCTGAATTC  1105
      |||||||||||||||||||||||||||||||||||
seq2  TGAGCTGCCTATTTATCTGTCTGTCTCCTGAATTC  1135

seq1: chr19_7249543_7250610
seq2: B6Ng01-310P07.g_67_1157

seq1  GAATTCTAGGGCAGGCAGGGCTAACAGAGATAACTCTGTCTTGAAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGGCAGGCAGGGCTAACAGAGATAACTCTGTCTTGAAAAACC  50

seq1  AAACCAAACCAGAACCAAACCAAACCAGAAAAAGCAATAATATGTCATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAACCAGAACCAAACCAAACCAGAAAAAGCAATAATATGTCATCT  100

seq1  CAGCATCAGAGAGGGTAAGGCAGTAGGCCAGCGTGGGCTAACAAGCAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCAGAGAGGGTAAGGCAGTAGGCCAGCGTGGGCTAACAAGCAAGA  150

seq1  CCCCGTCTGCAGAAAGATTTTTTTTTTTAAATTGCATATGCAATTTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGTCTGCAGAAAGATTTTTTTTTTTAAATTGCATATGCAATTTCATG  200

seq1  GTTCTGACATGTCTAAGAGGAGGCACCTCACTGAAACAGTGTATGTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGACATGTCTAAGAGGAGGCACCTCACTGAAACAGTGTATGTTTGT  250

seq1  TTGTTGAGACAGGGTCTCTATCCTAGTCTGGCCTTAACTCTAGATCCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAGACAGGGTCTCTATCCTAGTCTGGCCTTAACTCTAGATCCTCC  300

seq1  TGCCTCCCTTCATCACCCCAGGACTGAGGTTATGAGGGTGCACCACTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCCTTCATCACCCCAGGACTGAGGTTATGAGGGTGCACCACTGTG  350

seq1  CCTGGTTTCTGCAGTGCTGGAGACTGAGTGTAGGCAAGCCTTCATGCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTTCTGCAGTGCTGGAGACTGAGTGTAGGCAAGCCTTCATGCACA  400

seq1  CATGCTAGGTAAGGATACTGTGAATGGTTACATCCCTGGCCCATATGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTAGGTAAGGATACTGTGAATGGTTACATCCCTGGCCCATATGATG  450

seq1  GGTTTGTTAGGCTTGGGGGGTAGGTCTGTTGCTGTTGCTGTAATTGAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGTTAGGCTTGGGGGGTAGGTCTGTTGCTGTTGCTGTAATTGAATC  500

seq1  CCGGAGGCTGAGTAACTTAGAAGGAACAGAGACTTACTTCCATGGTGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGAGGCTGAGTAACTTAGAAGGAACAGAGACTTACTTCCATGGTGGTT  550

seq1  CTGCAGCCTGGGAATGCCAGGGTAAGGGCCTTGTGCTTTGTCCTTATGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCCTGGGAATGCCAGGGTAAGGGCCTTGTGCTTTGTCCTTATGGG  600

seq1  GCCTGCAGCATCTCTTGGCAAGACAAAGCAAGGCGACAGCTTCAGTGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCAGCATCTCTTGGCAAGACAAAGCAAGGCGACAGCTTCAGTGGCT  650

seq1  CTTCCTCTTAGAAAGCCACTCATGTCGTTGAGTATGGTGGCCCATACCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTTAGAAAGCCACTCATGTCGTTGAGTATGGTGGCCCATACCTA  700

seq1  TAACCCCAGCACTTAGGAGGTGCCAGCAGGAGGATCAGAACTTCCAGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCCAGCACTTAGGAGGTGCCAGCAGGAGGATCAGAACTTCCAGGCC  750

seq1  AGTTAACAGCTTTCCTCACAGACCCATCAGCACTTTAATTAGCACGTG-T  799
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGTTAACAGCTTTCCTCACAGACCCATCAGCACTTTAATTAGCACGTGTT  800

seq1  TCAGGTCTCCGCTACAAGGCTAG-TTTGAAGCCAGCCTGAGCTACAGGTG  848
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCAGGTCTCCGCTACAAGGCTAGTTTTGAAGCCAGCCTGAGCTACAGGTG  850

seq1  ACCCCGTCTCAAAACTCAAAACCACCACCA-TCACCACCAACAACAAAAC  897
      |||||||||||||||||||||||||||||| |||||||| ||||||||||
seq2  ACCCCGTCTCAAAACTCAAAACCACCACCATTCACCACC-ACAACAAAAC  899

seq1  ACCCAA-GGTTTTATCCTTTTAAAAAAAAGCT-AAGGCTCAG-AGAGAGC  944
      |||||| |||||||||||||| |||||||||| ||||||||| | |||||
seq2  ACCCAAGGGTTTTATCCTTTTTAAAAAAAGCTAAAGGCTCAGAATAGAGC  949

seq1  AG-AGGCCC--ACTGGAGGTCACCTGT--CTTTGGCCATAGTA-GGGCCT  988
      || ||||||   |||||||||||||||   ||||||||||||| ||||||
seq2  AGAAGGCCCCACCTGGAGGTCACCTGTTCTTTTGGCCATAGTAGGGGCCT  999

seq1  CCCTAAACATAGC-TAAGCA-GAGGGCTCAAGA--CAGC-CTT-GGGATC  1032
      ||||||||||||| |||||| |||||||  |||   ||| ||| ||||||
seq2  CCCTAAACATAGCTTAAGCAGGAGGGCTTCAGAACGAGCTCTTGGGGATC  1049

seq1  CCCA-CAGC-ACTTGAT--AGGGATCTG-TAGCC-TGCCTTT  1068
      |||| |||| |||||||  ||||||||| ||||| |||||||
seq2  CCCATCAGCAACTTGATTAAGGGATCTGTTAGCCTTGCCTTT  1091