BAC Information

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BAC

Clone NameB6Ng01-312B21
Chromosome19 (Build37)
Map Location 30,317,904 - 30,318,346
singlet/doubletsinglet
Overlap genenone
Upstream geneJak2, Insl6, Rln1, 5033414D02Rik, Cd274, Pdcd1lg2, C030046E11Rik, D19Wsu12e, Mlana, 9930021J03Rik, Ranbp6, Il33, Trpd52l3, Uhrf2, Gldc, EG625917, Mbl2
Downstream geneLOC100042088, LOC668020, EG546723, Dkk1, Prkg1, LOC625995, Cstf2t, 8430431K14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312B21.bB6Ng01-312B21.g
ACCGA103664GA103665
length1,2031,019
definitionB6Ng01-312B21.b B6Ng01-312B21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttatgattgggttacaacactcaggatgataccctccaggtc
catccatttgcccaggaatttcataaattcattctttttaatagctgact
actactccattgtgtaaatataccacattttttgtatccattcctctgtt
gagggacatctggattctttccagtttccagcttctggctattataaata
aggctgctatgaacatagtggaacatgtgtacttattaccagttggaaca
tcttctgggtatatgcccaggagaggtattgctggaactttgagtagtac
tatatctaattttctgaggaaccccctcagaaagactgacttccagagtg
gttgtacaagcttgcaatcccaccaccaatggaggagtgtccctctttct
ccacatcctcgccagcatctgctgtcacctgaacttttgatctgagccat
tctgactggtgtgaggtggaatcttaggattgttttgatttgcatttcct
tagtgattaaggatgttgaacattttttcaggtgctcctcagccattcag
tattcctcagttgagaattctttgtgtagctctgtaccccatttttaatg
gggttatttggttttctggggtctaacttcttgagatctttctatgtagt
ggatattagccctctatcagatttaggattggtaaagatcttttcccaat
cagttggtgggctttttgtcttattgacagtgtcttttgcatacagaagc
tttgcaattttatgaggtaccatttgtcaattcttgatcttacagcacaa
gccattgctgttctgtttagtatttttcccctgtgcccatatctttgagg
cttttccccactttctcctctataaatttcagtgtctctggttttatgtg
gagttctttgatccatttagacttgagatttgtacacggagataagaatg
gatcaattcacctttcctgtccccaccagcaccggggtagcctggacgcg
agtcttgcaagaacacccccagctacccacaggaccctcaagggatctta
aagaacttcttggtgagtggaacacgctgttgctgctccatcccaatcct
cgagggagctggaactgcattatttaaggaggccagaaatcctgtctgat
ccgaacttcacttgggggcgagtcgtgccgatatcctcacaagaggtatc
tca
gaattctgtacacacacgcgagtgcgcgtgcacgcacacacacacacaca
cacacacacacacacacacacacacacacagaggctatatacctttaact
ataatggctactcttcagtatccttacctgtgaagtgggactaaaattgc
acactatttctcaatccttgctaaaagccagatgagttggttatgtgctc
accaaagggctatggttccatggcatgggctgcttgatggaaacttggta
gcctgacagaagaagcctcatgtagtgctgctaatgaggggttggtactg
ccccagagctctaggtgtgtccctaaatgcttggacattgagacttcaag
gtggagatgaaaacaggaagacttgacaaacttgtaaagtccttcactcc
ctgagctgggagttatgtctaggacagccagcagctgctgagctgagtcc
ctgagcccctgcgcccctgcaccccttacaggttagctggcactgtgctt
aatgaaagatgctttattccaaagctttcatttcatggtcagtaaactaa
tgagacaaacagagtggcactggcataggctcatgcgagacagctatacc
agggtcccttcagcaaaatcttgctagcatatgcaatagtgtctgggttt
ggtagctgattatgggatggaaccccggtggggtagtttctggatagtcc
atcctttcattttagctccaaactttatctgtgtaactcctttcatggat
attttgttccctattctaaggaggaatgaagtatccacctgttagtcttc
ccttttcttgattttcttgtgttttgcaaattgtatcttgggtgttctat
gtttctgggctaatatccacttatcagtgagtgcataactaatgatttct
ttttgtgattgggttacctcactcaggataatatcctccagatacatcca
tttgcccaggaattacataaattcattgtttttaatagctgagtagtact
ccatgtgtacatgtactac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_30317904_30318346
seq2: B6Ng01-312B21.g_632_1074 (reverse)

seq1  ACACAATGGAGTACTACTCAGCTGTTAAACACAATGGAGTTATGAAATTC  50
      |||| |||||||||||||||||| ||||| |||||| | ||||| |||||
seq2  ACAC-ATGGAGTACTACTCAGCTATTAAAAACAATGAATTTATGTAATTC  49

seq1  TTGGATAAATGGATGTATCTGGAGGATATCATCCTTAGTGAGATAACCCA  100
       |||  ||||||||||||||||||||||| ||||| |||||| |||||||
seq2  CTGGGCAAATGGATGTATCTGGAGGATATTATCCTGAGTGAGGTAACCCA  99

seq1  ATCAC-AAAAGAAGTCATTAGATACGCACTCACTGATAAGTGGATATTAG  149
      ||||| ||||||| ||||||| || |||||||||||||||||||||||||
seq2  ATCACAAAAAGAAATCATTAGTTATGCACTCACTGATAAGTGGATATTAG  149

seq1  CCCAGAAACATAGCACACCCAAGATACAATTTGCAAAACAGAAGACAATC  199
      ||||||||||||| |||||||||||||||||||||||||| |||| ||||
seq2  CCCAGAAACATAGAACACCCAAGATACAATTTGCAAAACACAAGAAAATC  199

seq1  AAGAAGAGGGAAGACCAATGGGTAGATACTTCATTCCTCCTCAGAATAGG  249
      ||||| ||||||||| ||  ||| ||||||||||||||||| ||||||||
seq2  AAGAAAAGGGAAGACTAACAGGTGGATACTTCATTCCTCCTTAGAATAGG  249

seq1  GAACAAAATACCCATGAAAGGAGTTACAGAGACAAAGTTTGGAGCTAAGA  299
      |||||||||| ||||||||||||||||| ||| ||||||||||||||| |
seq2  GAACAAAATATCCATGAAAGGAGTTACACAGATAAAGTTTGGAGCTAAAA  299

seq1  TGAAAGGATGGACTATCCAGAGAATACCCCACCCGGGGATTCATCCCATA  349
      ||||||||||||||||||||| | ||||||| |||||| | |||||||||
seq2  TGAAAGGATGGACTATCCAGAAACTACCCCA-CCGGGGTTCCATCCCATA  348

seq1  ATCAGCCACCAAACCCAGACACTATTGCATATGCCAG-AAGATTTTGCTG  398
      |||||| ||||||||||||||||||||||||||| || ||||||||||||
seq2  ATCAGCTACCAAACCCAGACACTATTGCATATGCTAGCAAGATTTTGCTG  398

seq1  AAGGGACTCTGTTATAGCTGTCTCGTATGAGGCTATGCCAGTGCC  443
      ||||||| ||| ||||||||||||| ||||| |||||||||||||
seq2  AAGGGACCCTGGTATAGCTGTCTCGCATGAGCCTATGCCAGTGCC  443