BAC Information

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BAC

Clone NameB6Ng01-312H19
Chromosome19 (Build37)
Map Location 33,506,906 - 33,507,956
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC672490, LOC100042823, Minpp1, Papss2, Atad1, Pten, B430203M17Rik, 6530404N21Rik, LOC638381
Downstream geneEG668095, LOC628236, AI747699, EG668106, EG668112, EG668114, EG329055, EG433241, LOC668127, Lipf, Lipk, EG383462, Lipn, Ankrd22, Stambpl1, Acta2, Fas
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312H19.bB6Ng01-312H19.g
ACCGA103943GA103944
length6361,064
definitionB6Ng01-312H19.b B6Ng01-312H19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttaccatgaaggggtgttgaattttg
gcaaatgctttctcagcatctcatgagattatcatgtggtaatttttttg
agtttgcatatataatgtattatggtgatggatttctgtatattgaccca
tccatgcattcctggaatgaagcctacttgatcatgatggatgatagttt
tgatgtgctctttgattagctttgggagaagtttattgaatatatttata
tcaatattcataaggaaaattggtctgaagttctctttctttattgggtc
tttgtgtggttttggtatcagcctaactgtggcttcatgtatgaattggg
tagtggttcttctgtttctattttatgaaatagtttgaaaagtattagta
taggtcttctttgaaggtctgagagaattctacattaataccatctggtt
ctgttttttttttgttgttgttgttaatgacttttttgtttttgttattg
tttttaggggttatgggtttctattgttaagtctccttttcatttctgat
tttatttatttagatactgtctcagtgccctctgggtaatctgtctaagg
gtttatctgtattgttggttttttctcaaagaacta
gaattcagtagatgtctactttggatgtggaggaagctgatttataatga
gatctggtatccgtgatcagaagatagggacaatgtcctgaatgtcatgt
tgtatttttgttatcagattagagaagctacatctttcgaggctcagttt
tatcatttataataacattatctttatcgtgacttaattatatgatgaaa
taaactataaaacattacaaaacacagtgatataaaattatcattcattt
ttgtgttaattcgtaactttgtgcagaaaatcatagttttcatgagctca
tgagtgctatgattatgtagagtcatatatatatatgtgtatatatatat
atgacttagatacaaagatgatgatagacatagatgatgatagatataga
tatatacatacacatatacattcatttgttgctcatttttcatttgggct
cttccattttcctcaccctcttctatgaattcttctgagcatataagtat
agtgatgcatatgagatgataatatactaaatgaacaaattcttagaatc
atctactactgttagtatcgctttgccctcatttcatatgcactattacc
agctaaaatattcacagcctttttttttattttctcaaaaatataaagcc
aaacaatgttgcttccaaatatatatatatatatatatatatatatatat
atatatatatatatattttgcctggagccagccctgatgctctatctaat
tttcctccatctctgctccttcaaaaaaaaacactttgctaatatgccac
aatcaaagttacattaaacttctttccaaaggcccaggtagtttttgaga
ttttaggcatctagacagagaaccaagtaattttgactttcaaaatagtt
aatagttatttttcttactttgtgagatgtagaaaaaagacgatacctag
aaatttagatattaaaaaacagcagggtcagtcttgacacaaggaaaaag
tatgtacactggatgtattgatcttttttatttaagtttttgttaggacc
aatacgccagagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_33506906_33507956
seq2: B6Ng01-312H19.g_67_1130

seq1  GAATTCAGTAGATGTCTACTTTGGATGTGGAGGAAGCTGATTTATAATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGATGTCTACTTTGGATGTGGAGGAAGCTGATTTATAATGA  50

seq1  GATCTGGTATCCGTGATCAGAAGATAGGGACAATGTCCTGAATGTCATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGGTATCCGTGATCAGAAGATAGGGACAATGTCCTGAATGTCATGT  100

seq1  TGTATTTTTGTTATCAGATTAGAGAAGCTACATCTTTCGAGGCTCAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTTGTTATCAGATTAGAGAAGCTACATCTTTCGAGGCTCAGTTT  150

seq1  TATCATTTATAATAACATTATCTTTATCGTGACTTAATTATATGATGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTTATAATAACATTATCTTTATCGTGACTTAATTATATGATGAAA  200

seq1  TAAACTATAAAACATTACAAAACACAGTGATATAAAATTATCATTCATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTATAAAACATTACAAAACACAGTGATATAAAATTATCATTCATTT  250

seq1  TTGTGTTAATTCGTAACTTTGTGCAGAAAATCATAGTTTTCATGAGCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTAATTCGTAACTTTGTGCAGAAAATCATAGTTTTCATGAGCTCA  300

seq1  TGAGTGCTATGATTATGTAGAGTCATATATATATATGTGTATATATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCTATGATTATGTAGAGTCATATATATATATGTGTATATATATAT  350

seq1  ATGACTTAGATACAAAGATGATGATAGACATAGATGATGATAGATATAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTAGATACAAAGATGATGATAGACATAGATGATGATAGATATAGA  400

seq1  TATATACATACACATATACATTCATTTGTTGCTCATTTTTCATTTGGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACATACACATATACATTCATTTGTTGCTCATTTTTCATTTGGGCT  450

seq1  CTTCCATTTTCCTCACCCTCTTCTATGAATTCTTCTGAGCATATAAGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATTTTCCTCACCCTCTTCTATGAATTCTTCTGAGCATATAAGTAT  500

seq1  AGTGATGCATATGAGATGATAATATACTAAATGAACAAATTCTTAGAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGCATATGAGATGATAATATACTAAATGAACAAATTCTTAGAATC  550

seq1  ATCTACTACTGTTAGTATCGCTTTGCCCTCATTTCATATGCACTATTACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTACTGTTAGTATCGCTTTGCCCTCATTTCATATGCACTATTACC  600

seq1  AGCTAAAATATTCACAGCCTTTTTTTTTATTTTCTCAAAAATATAAAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAAATATTCACAGCCTTTTTTTTTATTTTCTCAAAAATATAAAGCC  650

seq1  AAACAATGTTGCTTCCAAATATATATATATATATATATATATATATATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATGTTGCTTCCAAATATATATATATATATATATATATATATATAT  700

seq1  ATATATATATATATATTTTGCCTGGAGCCAGCCCTGATGCTCTATCTAA-  749
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATATATATATATATATTTTGCCTGGAGCCAGCCCTGATGCTCTATCTAAT  750

seq1  TTTCCTCCATCTCTGCTCCTTCAAAAAAAAACAC-TTGCTAATATGCCAC  798
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTCCTCCATCTCTGCTCCTTCAAAAAAAAACACTTTGCTAATATGCCAC  800

seq1  AATCAAAG-TACATTAAACTTCTTTCCAAAGGCCCAGGTAGTTTTTGAGA  847
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAGTTACATTAAACTTCTTTCCAAAGGCCCAGGTAGTTTTTGAGA  850

seq1  TTTTAGGCATCTAGACAGAGAACCAAGTAATTTTTGAC-TTCAAAATAGT  896
      |||||||||||||||||||||||||||||| ||||||| |||||||||||
seq2  TTTTAGGCATCTAGACAGAGAACCAAGTAA-TTTTGACTTTCAAAATAGT  899

seq1  TAATAGTTA-TTTTCTTACTTT-TAAAATGT--AAAAAAAACAATACCTA  942
      ||||||||| |||||||||||| | | ||||  |||||| || |||||||
seq2  TAATAGTTATTTTTCTTACTTTGTGAGATGTAGAAAAAAGACGATACCTA  949

seq1  G-AATTTAGATA-TAAAAAACAGCA-GGTCAGTCTTGACACAAGG--AAA  987
      | |||||||||| |||||||||||| |||||||||||||||||||  |||
seq2  GAAATTTAGATATTAAAAAACAGCAGGGTCAGTCTTGACACAAGGAAAAA  999

seq1  GTAATGTACCACTGATTTTATAGAT-TTTTTTATTTAAATTTTT-TTA-G  1034
      || ||||| |||||  | ||| ||| |||||||||||| ||||| ||| |
seq2  GT-ATGTA-CACTGGATGTATTGATCTTTTTTATTTAAGTTTTTGTTAGG  1047

seq1  TCCCATACGCCAGAGCA  1051
       || |||||||||||||
seq2  ACCAATACGCCAGAGCA  1064