BAC Information

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BAC

Clone NameB6Ng01-314K21
Chromosome19 (Build37)
Map Location 50,762,039 - 50,763,132
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC629448, Siah1-ps1, EG433251, Sorcs1
Downstream geneLOC100042924, LOC100042928
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314K21.bB6Ng01-314K21.g
ACCGA105541GA105542
length1,1761,087
definitionB6Ng01-314K21.b B6Ng01-314K21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaccaatgccactaatccacagattcataaattttggctcacatc
agagccccatatggaatctctaattaaatattggggtttcaaataatttg
taaagattgaaagttatctgaatgtgtaatgataaaacttaattcagaat
caactgcataatgaatccaaaggtttcagagcgtttgctcagtttgcact
gagcaacttaactgtggccttctttctgtgcgcacagcaggtgcctggca
cggagcatgcgattgctatacacgtatcatctaatactgtgtggaatacc
tagggtcagataagaaaatagtgtatgctatgagttgcagtacttttact
gaacacattaagttgtctggtcttataaacatgtaatagttcagttatgc
aaaataaactcttttagtattttcctaccatcattcctcagcatgtgtta
aattagtatgtctttgagttgtaatctgttaacttatttgattttttttt
caaatttgtgctttaagttgtcaactggagttttataaaatcatcaaatg
catttccttctttagaacaggacagaatttccatctcaacatgattcatc
cattttgcaaatgtgtttacggacatcattctcagcattgaggattaaca
attatgcccgcaaagtattgatctgccctaaaattttgaagatatctatg
tcttggagtataaaacattctgacgagatataattttcaaaaaatgtatt
tgtctcattagcacatttttagttttttcctagtaaatgggaaaattgcg
cacacactagtttgtctatatagtggattacattgatggatttccatata
gaaaaccatcactgcatccctgggatgaagcctacttggtcaggatggac
aatcgttttgatgtgttcttggatttggtttgcaaggattttattgagta
ttttgcattgatattcataagggaagttggactgaagttctcttttcttt
gttgaatcttttgtggtggtttaagtatcagtataaatgtggctccattg
aatgataggtagaagtgcactttcctccctacctattccaatatagtact
tggaagtcctagcgagccgttccacacaccaaggattccgagatccaatg
ccagaagagtccaaatatctccgcag
gaattcaatctttggatattctggttttgcatattttgctttaatttaaa
tctttttgctgtgcacatatataataactatgcacatatttacaacttta
tgttcctgtctagtcactgcttagctctttcctaccatctttaatatggt
ttattgattattattcaattggatttttgaatgtccattgtgaatcttct
ttgatttgtgagcacattgaaaagcattctatttaattatcaagtatttg
aaataagtaattttagataactaattgctaatatgcttcattgcaatcag
aaaaattattgtatgatttcagttcatctctttgtgaccaatagtggtaa
atatcataataaactcaatgcaaaagctatgctatgtatacagtctgggc
tgtacttatattcactgggttaggcttactaatcaagctgttatactctg
tagctttattaatcccttgtttatgttctacttgttagaaatggataaaa
tattcagttattatgattttttctttagctttaaaagctagtcattgtag
atattctgaaggcatattaagaatactttaaaattttttatattatccca
taatttttatgttttatctcagtaaaataattatcctgttttccaggagt
atttcttgccttaaacttttatgctagcttaataatgttcctttaaagta
aactcagtatatttgaaacttttgctttttactgtcttgaaatatgcctt
tatttatttatttatttatttatttatttatttatttattgaaaatattc
ttctttcatacaaagcctcccaaccacaatttaccctaccttcacttctc
ccaaaccgtctccccactttctttctctctctaggtctcttccctcagtt
taaaaacataccacctgtttcttcttcagaaaaagagtaggtctccaggg
agatactaccaaacaggacaaacaaaatacatagaatgaggcaaagccct
acaacccttgaccaggctaaataagagaatcaacagggtaagagtctttg
gagccagccaaagagtcaagacacacctgctccgctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_50762039_50763132
seq2: B6Ng01-314K21.g_67_1153

seq1  GAATTCAATCTTTGGATATTCTGGTTTTGCATATTTTGCTTTAATTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCTTTGGATATTCTGGTTTTGCATATTTTGCTTTAATTTAAA  50

seq1  TCTTTTTGCTGTGCACATATATAATAACTATGCACATATTTACAACTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTGCTGTGCACATATATAATAACTATGCACATATTTACAACTTTA  100

seq1  TGTTCCTGTCTAGTCACTGCTTAGCTCTTTCCTACCATCTTTAATATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTGTCTAGTCACTGCTTAGCTCTTTCCTACCATCTTTAATATGGT  150

seq1  TTATTGATTATTATTCAATTGGATTTTTGAATGTCCATTGTGAATCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGATTATTATTCAATTGGATTTTTGAATGTCCATTGTGAATCTTCT  200

seq1  TTGATTTGTGAGCACATTGAAAAGCATTCTATTTAATTATCAAGTATTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTGTGAGCACATTGAAAAGCATTCTATTTAATTATCAAGTATTTG  250

seq1  AAATAAGTAATTTTAGATAACTAATTGCTAATATGCTTCATTGCAATCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGTAATTTTAGATAACTAATTGCTAATATGCTTCATTGCAATCAG  300

seq1  AAAAATTATTGTATGATTTCAGTTCATCTCTTTGTGACCAATAGTGGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTATTGTATGATTTCAGTTCATCTCTTTGTGACCAATAGTGGTAA  350

seq1  ATATCATAATAAACTCAATGCAAAAGCTATGCTATGTATACAGTCTGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATAATAAACTCAATGCAAAAGCTATGCTATGTATACAGTCTGGGC  400

seq1  TGTACTTATATTCACTGGGTTAGGCTTACTAATCAAGCTGTTATACTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTATATTCACTGGGTTAGGCTTACTAATCAAGCTGTTATACTCTG  450

seq1  TAGCTTTATTAATCCCTTGTTTATGTTCTACTTGTTAGAAATGGATAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTATTAATCCCTTGTTTATGTTCTACTTGTTAGAAATGGATAAAA  500

seq1  TATTCAGTTATTATGATTTTTTCTTTAGCTTTAAAAGCTAGTCATTGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGTTATTATGATTTTTTCTTTAGCTTTAAAAGCTAGTCATTGTAG  550

seq1  ATATTCTGAAGGCATATTAAGAATACTTTAAAATTTTTTATATTATCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTGAAGGCATATTAAGAATACTTTAAAATTTTTTATATTATCCCA  600

seq1  TAATTTTTATGTTTTATCTCAGTAAAATAATTATCCTGTTTTCCAGGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTATGTTTTATCTCAGTAAAATAATTATCCTGTTTTCCAGGAGT  650

seq1  ATTTCTTGCCTTAAACTTTTATGCTAGCTTAATAATGTTCCTTTAAAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTGCCTTAAACTTTTATGCTAGCTTAATAATGTTCCTTTAAAGTA  700

seq1  AACTCAGTATATTTGAAACTTTTGCTTTTTACTGTCTTGAAATATGCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGTATATTTGAAACTTTTGCTTTTTACTGTCTTGAAATATGCCTT  750

seq1  TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTGAAAATATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTGAAAATATTC  800

seq1  TTCTTTCATACAAAGCCTCCCAACCACAATTTACCCTACCTTCACTTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCATACAAAGCCTCCCAACCACAATTTACCCTACCTTCACTTCTC  850

seq1  CCAAACCGTCTCCCCACTTTCTTTCTCTCTCTAGGTCTCTTCCCTCAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCGTCTCCCCACTTTCTTTCTCTCTCTAGGTCTCTTCCCTCAGTT  900

seq1  T-AAAACATACCACCTGTTTCTTCTTCAG-AAAAGAGTAGGTCTCCA-GG  947
      | ||||||||||||||||||||||||||| ||||||||||||||||| ||
seq2  TAAAAACATACCACCTGTTTCTTCTTCAGAAAAAGAGTAGGTCTCCAGGG  950

seq1  AGATAACTACCAAACAGGACAAAACAAAATACAATAAGATGAGGCAAAAG  997
      |||| ||||||||||||||| ||||||||||| |||  ||||||| ||||
seq2  AGAT-ACTACCAAACAGGAC-AAACAAAATAC-ATAGAATGAGGC-AAAG  996

seq1  CCCTACAAACCCTTGACAAGCCTAAATAAGAGAATCCAACAGGGGGAAAG  1047
      |||||| |||||||||| || |||||||||||||| |||||  ||| |||
seq2  CCCTAC-AACCCTTGACCAGGCTAAATAAGAGAAT-CAACA--GGGTAAG  1042

seq1  AGTCTTTGGAGCAGGCAAAAGAGTCAGGGACACACCTGCTCCCGCTT  1094
      ||||||||||||  || |||||||||  |||||||||||| ||||||
seq2  AGTCTTTGGAGCCAGCCAAAGAGTCA-AGACACACCTGCT-CCGCTT  1087