BAC Information

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BAC

Clone NameB6Ng01-315D08
Chromosome19 (Build37)
Map Location 32,843,195 - 32,844,320
singlet/doubletsinglet
Overlap genePten
Upstream gene1810073H04Rik, Asah2, EG668042, Sgms1, 2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1, Papss2, Atad1
Downstream geneB430203M17Rik, 6530404N21Rik, LOC638381, EG668095, LOC628236, AI747699, EG668106, EG668112, EG668114
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315D08.bB6Ng01-315D08.g
ACCGA105917GA105918
length1,1241,149
definitionB6Ng01-315D08.b B6Ng01-315D08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggctccaaatacttttgatatattaatttcatttattttgga
gtattttgctgatttgaaattgaaatggaatagaaataatttgaacaatt
ttcatactaaagtgggcatagctttgttgctgtacctttgaatccataat
tattggcttgccatgatgttacagttgcagtttgaataatgtggtttata
tttgtatagttggcttgtatttgttgtactatcaattaatcaatgtgcac
tgataactagtactagcttttggtgaaaaatctgcatttaacagtttgtc
agattttatttttaagtcagatactaaaagagaatctttttttcatagat
ttttattatttaaatgcattttatatatatcaaacataataatactgagt
attttaggaatcaaataatacataaaaatttgttcaatttttatattcat
atctaaaagagaatctttaaccatatcagctaaccattaattctttatca
ataaattatattaatattttttgtataaacaatttaaaacaaagtgatag
aaacatcgttttttattttataaacaaagttactactaggtgtgctctgt
ggcctgtgaccttagcaccctggagctgtccccaaggaaaccagaagtgc
agttactcttggccacattgtaaggtgaagcttagtctagaccaaaagag
acagaaccaagacagaaaaacaaattacctgcttattattaagtacgatt
ctttcccaaataaagtgaaacttaagcttgaaattttcatctaggcataa
ggttgctatcttgggttctaataaaaattagtggtggcaaaaatcttttg
ttactgttttcttgttgctgcctggggactgaagacccagtcttcagtag
ctttggtggtctggtttgtagggcatttgatgaaagaacagtattggaaa
actgtgaagcacttttctcttgcattgtgtccgattgtgtcatgattgcg
tgagtttgaaaaatatgagaactccttagaaaagatgttgtttgttatta
ctgcaaagttcaatagctgtgtttgtgcgtgtcagaataccaggcctgcc
atctggttctcagatgtaaggaaa
gaattctctctcacacacacataccacatttcttcacgttaaatggagct
actgcaacatttcagtccatatgtaggtatcaagggctaccctagatgca
aggacagccctcggcacaatggtccagcacacgggaggcactcggtaagc
ccatgctgtggccaccagccccccttctctccagcaaacaggactctggg
aagaatcactgaaggacaaactcagaaattcttggaactattgccaaaca
gagaataacaagagccgctgtgggttcaggctattctgagaagccacact
tggtccaagtgggtaagccaggcataaagcctgggtctgggctctgagac
ctagcacaggaactgaaagctacagctgtcagaggcatgtctgcttcctg
tctctgtctaccatgtctctcgggctgattatatccttttaatttgtttt
ttaattgaaacagaattacaccacttccccatccctttacctcctccaac
tcctcccacgtacccccttccagctgtccccatgcccacccctcactctc
aagttgatagcctctatctctttgattagtgtgtgtgtgtatgtgtacat
gtgtgtatgtgtatctgtttacatgaatatatataaataaaatctgtgtt
tcttatctgtgtgtatatggtttcaaagctgattactttgcttaggacaa
taaataaggtggctcctctctgagaaaagctaagtcttcctctttcagca
gtcactgctcctttgtctagggttacgaccccatgaaatttccctcttcc
acctttggatatttatttatttacatttcaagtgttatcccctttcccag
tttcccttccacaaaccccctatcccatccccccctccccctgctttctt
gagagggaactcccccatgcaccacacatttcccacttcaccacctcaca
ttcccttacaactgggggcgttgagcctttcagaagaaccaagggcctct
tcctcccattgaatgcccaaacaagaacaatcttctgctacatattgcag
ctgggagccatggtttcctcaatgtggtactctttgatgaatggtagttc
cttgaaagcttcttgggggactgtgggggattcatggattagggtatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_32843195_32844320
seq2: B6Ng01-315D08.b_46_1169

seq1  GAATTCCAGGCTCCAAATACTTTTGATATATTAATTTCATTTATTTTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCTCCAAATACTTTTGATATATTAATTTCATTTATTTTGGA  50

seq1  GTATTTTGCTGATTTGAAATTGAAATGGAATAGAAATAATTTGAACAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTGCTGATTTGAAATTGAAATGGAATAGAAATAATTTGAACAATT  100

seq1  TTCATACTAAAGTGGGCATAGCTTTGTTGCTGTACCTTTGAATCCATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACTAAAGTGGGCATAGCTTTGTTGCTGTACCTTTGAATCCATAAT  150

seq1  TATTGGCTTGCCATGATGTTACAGTTGCAGTTTGAATAATGTGGTTTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGCTTGCCATGATGTTACAGTTGCAGTTTGAATAATGTGGTTTATA  200

seq1  TTTGTATAGTTGGCTTGTATTTGTTGTACTATCAATTAATCAATGTGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATAGTTGGCTTGTATTTGTTGTACTATCAATTAATCAATGTGCAC  250

seq1  TGATAACTAGTACTAGCTTTTGGTGAAAAATCTGCATTTAACAGTTTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAACTAGTACTAGCTTTTGGTGAAAAATCTGCATTTAACAGTTTGTC  300

seq1  AGATTTTATTTTTAAGTCAGATACTAAAAGAGAATCTTTTTTTCATAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTATTTTTAAGTCAGATACTAAAAGAGAATCTTTTTTTCATAGAT  350

seq1  TTTTATTATTTAAATGCATTTTATATATATCAAACATAATAATACTGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTATTTAAATGCATTTTATATATATCAAACATAATAATACTGAGT  400

seq1  ATTTTAGGAATCAAATAATACATAAAAATTTGTTCAATTTTTATATTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGGAATCAAATAATACATAAAAATTTGTTCAATTTTTATATTCAT  450

seq1  ATCTAAAAGAGAATCTTTAACCATATCAGCTAACCATTAATTCTTTATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAAGAGAATCTTTAACCATATCAGCTAACCATTAATTCTTTATCA  500

seq1  ATAAATTATATTAATATTTTTTGTATAAACAATTTAAAACAAAGTGATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTATATTAATATTTTTTGTATAAACAATTTAAAACAAAGTGATAG  550

seq1  AAACATCGTTTTTTATTTTATAAACAAAGTTACTACTAGGTGTGCTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCGTTTTTTATTTTATAAACAAAGTTACTACTAGGTGTGCTCTGT  600

seq1  GGCCTGTGACCTTAGCACCCTGGAGCTGTCCCCAAGGAAACCAGAAGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTGACCTTAGCACCCTGGAGCTGTCCCCAAGGAAACCAGAAGTGC  650

seq1  AGTTACTCTTGGCCACATTGTAAGGTGAAGCTTAGTCTAGACCAAAAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTCTTGGCCACATTGTAAGGTGAAGCTTAGTCTAGACCAAAAGAG  700

seq1  ACAGAACCAAGACAGAAAAACAAATTACCTGCTTATTATTAAGTACGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACCAAGACAGAAAAACAAATTACCTGCTTATTATTAAGTACGATT  750

seq1  CTTTCCCAAATAAAGTGAAACTTAAGCTTGAAATTTTCATCTAGGCATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCAAATAAAGTGAAACTTAAGCTTGAAATTTTCATCTAGGCATAA  800

seq1  GGTTGCTATCTTGGGTTCTAATAAAAATTAGTGGTGGCAAAAATCTTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCTATCTTGGGTTCTAATAAAAATTAGTGGTGGCAAAAATCTTTTG  850

seq1  TTACTGTTTTCTTGTTGCTGCCTGGGGACTGAAGACCCAGTCTTCAGTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTTTTCTTGTTGCTGCCTGGGGACTGAAGACCCAGTCTTCAGTAG  900

seq1  CTTTGGTGGTCTGGTTTGTAGGGCATTTGATGAAAGAACAGTATTGGAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTGGTCTGGTTTGTAGGGCATTTGATGAAAGAACAGTATTGGAAA  950

seq1  ACTGTGAAGCAC-TTTCTCCTGCATTGTGTCCGGATTGTGGTCATGATTG  999
      |||||||||||| |||||| |||||||||||| |||||| ||||||||||
seq2  ACTGTGAAGCACTTTTCTCTTGCATTGTGTCC-GATTGT-GTCATGATTG  998

seq1  CGTGAGTTTG-AAAATATGAGAAGGTCCTTAG-AAAGATGTTTGTTTGTT  1047
      |||||||||| ||||||||||||  ||||||| ||||||| |||||||||
seq2  CGTGAGTTTGAAAAATATGAGAA-CTCCTTAGAAAAGATG-TTGTTTGTT  1046

seq1  ATTACTGCAAAGGTCATAGGTTGTGGTTGTGCCGTGTCCAGATACCCAGG  1097
      |||||||||||| |||   | |||| ||||| ||||| ||||   |||||
seq2  ATTACTGCAAAGTTCAATAGCTGTGTTTGTG-CGTGT-CAGAATACCAGG  1094

seq1  CCTGCCATCTGTTCCTCAGATGT-AGGAAA  1126
      ||||||||||| | ||||||||| ||||||
seq2  CCTGCCATCTGGTTCTCAGATGTAAGGAAA  1124