BAC Information

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BAC

Clone NameB6Ng01-318G24
Chromosome19 (Build37)
Map Location 30,586,147 - 30,748,297
singlet/doubletdoublet
Overlap geneLOC668020, EG546723, Dkk1, Prkg1
Upstream geneC030046E11Rik, D19Wsu12e, Mlana, 9930021J03Rik, Ranbp6, Il33, Trpd52l3, Uhrf2, Gldc, EG625917, Mbl2, LOC100042088
Downstream geneLOC625995, Cstf2t, 8430431K14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318G24.bB6Ng01-318G24.g
ACCGA108326GA108327
length4771,088
definitionB6Ng01-318G24.b B6Ng01-318G24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,586,147 - 30,586,629)(30,747,222 - 30,748,297)
sequence
aggccttctaggagagaagggctcagtctgccgagccatatctcatctcc
attcagtctcatttctcattgtttctatcaatggacatttctgttagtca
tgtctcatgtccccatcttttaaatctgttacaaaatttggttttttttt
aacctaaaaaaacaattttcactttatcccatttcatatctttcaaatta
caaaaagaatatgtttattgtagaatgtaaatatataaagatgaataaat
ccagactaaactttgacatctcacctcttcgaatcatgattctcgtggta
taaccagaggtgtgtgtttcttgtggagacatctttttttctgaaaagaa
aatagtttaaaacacattgtttatcttactttttaaaatttaacatttaa
taatatttggcacaaatgtatctttccccactttccttccagggttatct
cttgctcttatcaacagctagatgtgt
gaattctcttgtgatctaagatatctgagttgggggaagaaaaaccctgg
cctcatcgcagacaagtgatgtagtgttgtctgagtttcatggcaggaga
ttatgaactagcccactgagtcctcaccggggtcactccatatccccagt
gcagtcaaacctccctccaaaaaggcattacctggcatccaaagggagca
tactgtggtccttttagaggacacataccctggggagcaagggagtgtct
gtgtggccactgaggctctcctcctgtgtctcatgcacacattggccatt
gtcagactggccctgtgctacaagtgtgcctcatttgcatggcaatcttt
atcatttagaagactgtgagcaaaaaagtgaccaagtgaccagacttgcc
aagaagctgtgtgaaaccctggaagatcatgaaaaggcacatgagtagat
cctcctgtggttgctagttggagctgaccctggcagcacaggcctgtact
ctcagctcctctagagtttgaacagaaatatcatatgttcaagactcacc
tagtctatagagtatgttcagggcaagcctgggctactaagtgagtcctg
tctcaaaagaaaaagtaaaaagagggcagagttaaagctcagagtccttg
cctcccacatgaaaggctcacagggagtttgaactgactctgaactaatc
cttctatctctattttttctatttaaacttttatttctattaatattttg
aactaggatatgttattgttattgttgttgctattattattccagagaaa
aatcataggctttaacaggtgactgtggagtttaatgctacattgtaagt
cggcaacagtcaactttaatctccagtatatctccataccaggctatttc
ttataggcttggttttaaatagaaaattcagttgagtagctagatttaag
tgtgaagatatgccttgtttatattttcagctggaaggtacttcaagaaa
taaagcattatatgtggtgtgtttgttgttgtgtgtggctgccgtgtggt
gcctgtgacaataaggacattttccgtagatgctatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_30586147_30586629
seq2: B6Ng01-318G24.b_47_529

seq1  GAATTCAGGCCTTCTAGGAGAGAAGGGCTCAGTCTGCCGAGCCATATCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCCTTCTAGGAGAGAAGGGCTCAGTCTGCCGAGCCATATCTC  50

seq1  ATCTCCATTCAGTCTCATTTCTCATTGTTTCTATCAATGGACATTTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCATTCAGTCTCATTTCTCATTGTTTCTATCAATGGACATTTCTGT  100

seq1  TAGTCATGTCTCATGTCCCCATCTTTTAAATCTGTTACAAAATTTGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATGTCTCATGTCCCCATCTTTTAAATCTGTTACAAAATTTGGTTT  150

seq1  TTTTTTAACCTAAAAAAACAATTTTCACTTTATCCCATTTCATATCTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAACCTAAAAAAACAATTTTCACTTTATCCCATTTCATATCTTTC  200

seq1  AAATTACAAAAAGAATATGTTTATTGTAGAATGTAAATATATAAAGATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACAAAAAGAATATGTTTATTGTAGAATGTAAATATATAAAGATGA  250

seq1  ATAAATCCAGACTAAACTTTGACATCTCACCTCTTCGAATCATGATTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCCAGACTAAACTTTGACATCTCACCTCTTCGAATCATGATTCTC  300

seq1  GTGGTATAACCAGAGGTGTGTGTTTCTTGTGGAGACATCTTTTTTTCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTATAACCAGAGGTGTGTGTTTCTTGTGGAGACATCTTTTTTTCTGA  350

seq1  AAAGAAAATAGTTTAAAACACATTGTTTATCTTACTTTTTAAAATTTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAATAGTTTAAAACACATTGTTTATCTTACTTTTTAAAATTTAAC  400

seq1  ATTTAATAATATTTGGCACAAATGTATCTTTCCCCACTTTCCTTCCAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATAATATTTGGCACAAATGTATCTTTCCCCACTTTCCTTCCAGGG  450

seq1  TTATCTCTTGCTCTTATCAACAGCTAGATGTGT  483
      |||||||||||||||||||||||||||||||||
seq2  TTATCTCTTGCTCTTATCAACAGCTAGATGTGT  483

seq1: chr19_30747222_30748297
seq2: B6Ng01-318G24.g_70_1157 (reverse)

seq1  TAATAACATCTA-GGAAAATG-CCATAATG-CACAGGCA-CACAC-GCAA  45
      ||||| |||||| |||||||| || || || |||||||| ||||| ||| 
seq2  TAATAGCATCTACGGAAAATGTCCTTATTGTCACAGGCACCACACGGCAG  50

seq1  ACACACACAAACACAAACACA-CACATAT-ATGCTTTA-TTCT--GAGTA  90
       |||||||||  ||||||||| ||||||| |||||||| ||||   ||||
seq2  CCACACACAACAACAAACACACCACATATAATGCTTTATTTCTTGAAGTA  100

seq1  CCTTCCAGCTG-AAATATAAACAAGGCATATCTTCACACTTAAATCTAGC  139
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCAGCTGAAAATATAAACAAGGCATATCTTCACACTTAAATCTAGC  150

seq1  TACTCAACTGAATTTTCTATTTAAAACCAAGCCTATAAGAAATAGCCTGG  189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAACTGAATTTTCTATTTAAAACCAAGCCTATAAGAAATAGCCTGG  200

seq1  TATGGAGATATACTGGAGATTAAAGTTGACTGTTGCCGACTTACAATGTA  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAGATATACTGGAGATTAAAGTTGACTGTTGCCGACTTACAATGTA  250

seq1  GCATTAAACTCCACAGTCACCTGTT-AAGCCTATGATTTTTCTCTGGAAT  288
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GCATTAAACTCCACAGTCACCTGTTAAAGCCTATGATTTTTCTCTGGAAT  300

seq1  AATAATAGCAACAACAATAACAATAACATATCCTAGTTCAAAATATTAAT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAGCAACAACAATAACAATAACATATCCTAGTTCAAAATATTAAT  350

seq1  AGAAATAAAAGTTTAAATAGAAAAAATAGAGATAGAAGGATTAGTTCAGA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAAAAGTTTAAATAGAAAAAATAGAGATAGAAGGATTAGTTCAGA  400

seq1  GTCAGTTCAAACTCCCTGTGAGCCTTTCATGTGGGAGGCAAGGACTCTGA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTTCAAACTCCCTGTGAGCCTTTCATGTGGGAGGCAAGGACTCTGA  450

seq1  GCTTTAACTCTGCCCTCTTTTTACTTTTTCTTTTGAGACAGGACTCACTT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAACTCTGCCCTCTTTTTACTTTTTCTTTTGAGACAGGACTCACTT  500

seq1  AGTAGCCCAGGCTTGCCCTGAACATACTCTATAGACTAGGTGAGTCTTGA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCCCAGGCTTGCCCTGAACATACTCTATAGACTAGGTGAGTCTTGA  550

seq1  ACATATGATATTTCTGTTCAAACTCTAGAGGAGCTGAGAGTACAGGCCTG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGATATTTCTGTTCAAACTCTAGAGGAGCTGAGAGTACAGGCCTG  600

seq1  TGCTGCCAGGGTCAGCTCCAACTAGCAACCACAGGAGGATCTACTCATGT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCAGGGTCAGCTCCAACTAGCAACCACAGGAGGATCTACTCATGT  650

seq1  GCCTTTTCATGATCTTCCAGGGTTTCACACAGCTTCTTGGCAAGTCTGGT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTCATGATCTTCCAGGGTTTCACACAGCTTCTTGGCAAGTCTGGT  700

seq1  CACTTGGTCACTTTTTTGCTCACAGTCTTCTAAATGATAAAGATTGCCAT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGGTCACTTTTTTGCTCACAGTCTTCTAAATGATAAAGATTGCCAT  750

seq1  GCAAATGAGGCACACTTGTAGCACAGGGCCAGTCTGACAATGGCCAATGT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGAGGCACACTTGTAGCACAGGGCCAGTCTGACAATGGCCAATGT  800

seq1  GTGCATGAGACACAGGAGGAGAGCCTCAGTGGCCACACAGACACTCCCTT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGAGACACAGGAGGAGAGCCTCAGTGGCCACACAGACACTCCCTT  850

seq1  GCTCCCCAGGGTATGTGTCCTCTAAAAGGACCACAGTATGCTCCCTTTGG  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCAGGGTATGTGTCCTCTAAAAGGACCACAGTATGCTCCCTTTGG  900

seq1  ATGCCAGGTAATGCCTTTTTGGAGGGAGGTTTGACTGCACTGGGGATATG  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGGTAATGCCTTTTTGGAGGGAGGTTTGACTGCACTGGGGATATG  950

seq1  GAGTGACCCCGGTGAGGACTCAGTGGGCTAGTTCATAATCTCCTGCCATG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGACCCCGGTGAGGACTCAGTGGGCTAGTTCATAATCTCCTGCCATG  1000

seq1  AAACTCAGACAACACTACATCACTTGTCTGCGATGAGGCCAGGGTTTTTC  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGACAACACTACATCACTTGTCTGCGATGAGGCCAGGGTTTTTC  1050

seq1  TTCCCCCAACTCAGATATCTTAGATCACAAGAGAATTC  1076
      ||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCAACTCAGATATCTTAGATCACAAGAGAATTC  1088