BAC Information

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BAC

Clone NameB6Ng01-318K15
Chromosome19 (Build37)
Map Location 12,711,078 - 12,824,804
singlet/doubletdoublet
Overlap geneGlyat, Olfr1442, Olfr1443, Keg1
Upstream geneMs4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549
Downstream geneZfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318K15.bB6Ng01-318K15.g
ACCGA108492GA108493
length1,153931
definitionB6Ng01-318K15.b B6Ng01-318K15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,823,661 - 12,824,804)(12,711,078 - 12,711,716)
sequence
gaattcattataagaaaaggatggaggaaagaataaatagagggaaaaat
aaaagtttatttcaaataatggctttcttccttcttcattgtttttttct
gcactagactcctcatgccagagcccacaaaggctctttgaatatgaacc
tgagttttgaacttccagcctcgctgatttctttgacctgtgatttagag
actcctgactctttcagtgctgtagtgtagcatttcccaacatatatgcc
attgttaacttgcaccctaagctgcttttaaaattgtgctttattgatcc
cggggagatgacctagaggttaagagcactggctgctcttgcagaggacg
caagttttttcccagcacacatgaccgctaacaaccacctttaactccat
cttcagggagttccaacacccttttctgacctctaggggcaccaggccca
catgtggtacacatacacacagactgacaaaacatccatttacataaaat
aaataaatctaaaattttagaaaggaaaaaaaagaagattctgttactgc
caaatagcacctcccaggggaccaacttgaaaggacgctctggattccac
ctcagcccctactttatatacagtatttgttctcagagaagagagtctac
tcacagccacagctcctaagaagtcacactgggacaccagcccaagtccg
tctgacttagctctggctcccactcttaagttagctcagggtttaaacaa
tcacaagtttgaactttcacatgctgaaaataggggttctaacatggttt
tcatccaatagctcatccaacgctttctaaagattcggacatactacctg
catcttacacaggaccaaactgaacaaggaatgacgagagcacgacactt
gccccagatcaaatctactgctctgaactacagcattgagtaaccgctcc
tgatctttggtgagggtgcatgcctctccagattaaaaaaaaaataataa
ataaaataaaaggatatcttttttaaactttctttttaaagatttttttt
gtatgcctgcttttcctttgcatttaagtctgttaacacttaaatggcaa
tgcaggtgccaaaggttgagaagagggtgttcagaaacctgaaacctgaa
gtt
gaattcttgaatcaaatatgtgtccataacctgggaatatggattcaggt
taccccaactaacacgttctgacagcgaaaacatttcatgaagttctaca
gtcacattactataaaggtcagaagtcagagcaatctccaagtatgtagg
tagaaacatcatgtaggcttggtcacagcaaagtggagacatctctgcta
taggtctcaggtgctatctgatgacaatcgtagcttttgagttagaagat
gtcagagcctcctaagttcatagatacccaaaggttttccagacagttaa
aacatcaaaagaagccgggcatggtggtgcacgcttttcatcccagcact
cgggaggcagtggcaggcggatttttgagttcgaggccagcctggtctac
aaagtgagttccaggacagccagggctatacagagaaaccctgtctcaaa
aaacaaaacaaaacaaaaacaaaaaaaaacaaaacaaaaaaaaacatcaa
aagagtcttagattggagacagaggtgagaaatgtgtggctggaagggtt
ctgaaaatagctagagataattttgcctctgagtgtacaatatctcagtt
ctccacaactacagacttctgattagttgtccagctttgtggagtactta
actttaggtatgctttcctggaacttcttgtttcacaaactaaagcagcc
ggttctggacttttactccattgatctatttgtttatcccttttgccaag
gtactctgccttgataacattctgcttttgattaataacaaggcttatta
cactttacatgaattttcatcaaccagttgtgttcccgttcccacaaatg
caaatggaaccctggggggggttttcattgatggaaatagaatcaacctg
tagaataactagaatttttatttttaatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12823661_12824804
seq2: B6Ng01-318K15.b_46_1198 (reverse)

seq1  AACTTCA-GTTCCAGGGGTTCTG-ACACCCTCTTCT-AACCTTTTTGGGC  47
      ||||||| ||| || || ||||| |||||||||||| |||||||   |||
seq2  AACTTCAGGTTTCA-GGTTTCTGAACACCCTCTTCTCAACCTTT---GGC  46

seq1  A-CTGCAT--GCATTT-AGTGT--ACAGACCTAAATGC-AAGGAAAA-CA  89
      | ||||||   ||||| |||||  |||||| ||||||| |||||||| ||
seq2  ACCTGCATTGCCATTTAAGTGTTAACAGACTTAAATGCAAAGGAAAAGCA  96

seq1  -GCATACAAAAAAAATCTTTAAAAAG-AAGTTT-AAAAAGATATCCTTTT  136
       ||||||||||||||||||||||||| |||||| ||||||||||||||||
seq2  GGCATACAAAAAAAATCTTTAAAAAGAAAGTTTAAAAAAGATATCCTTTT  146

seq1  ATTTTATTTTATTATTTTTTTTTTAATCTGGAGAGGCATGCACCCTCACC  186
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTA-TTTATTATTTTTTTTTTAATCTGGAGAGGCATGCACCCTCACC  195

seq1  AAAGATCAGGAGCGGTTACTCAATGCTGTAGTTCAGAGCAGTAGATTTGA  236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCAGGAGCGGTTACTCAATGCTGTAGTTCAGAGCAGTAGATTTGA  245

seq1  TCTGGGGCAAGTGTCGTGCTCTCGTCATTCCTTGTTCAGTTTGGTCCTGT  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGCAAGTGTCGTGCTCTCGTCATTCCTTGTTCAGTTTGGTCCTGT  295

seq1  GTAAGATGCAGGTAGTATGTCCGAATCTTTAGAAAGCGTTGGATGAGCTA  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGATGCAGGTAGTATGTCCGAATCTTTAGAAAGCGTTGGATGAGCTA  345

seq1  TTGGATGAAAACCATGTTAGAACCCCTATTTTCAGCATGTGAAAGTTCAA  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGAAAACCATGTTAGAACCCCTATTTTCAGCATGTGAAAGTTCAA  395

seq1  ACTTGTGATTGTTTAAACCCTGAGCTAACTTAAGAGTGGGAGCCAGAGCT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGATTGTTTAAACCCTGAGCTAACTTAAGAGTGGGAGCCAGAGCT  445

seq1  AAGTCAGACGGACTTGGGCTGGTGTCCCAGTGTGACTTCTTAGGAGCTGT  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGACGGACTTGGGCTGGTGTCCCAGTGTGACTTCTTAGGAGCTGT  495

seq1  GGCTGTGAGTAGACTCTCTTCTCTGAGAACAAATACTGTATATAAAGTAG  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGAGTAGACTCTCTTCTCTGAGAACAAATACTGTATATAAAGTAG  545

seq1  GGGCTGAGGTGGAATCCAGAGCGTCCTTTCAAGTTGGTCCCCTGGGAGGT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGAGGTGGAATCCAGAGCGTCCTTTCAAGTTGGTCCCCTGGGAGGT  595

seq1  GCTATTTGGCAGTAACAGAATCTTCTTTTTTTTCCTTTCTAAAATTTTAG  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTGGCAGTAACAGAATCTTCTTTTTTTTCCTTTCTAAAATTTTAG  645

seq1  ATTTATTTATTTTATGTAAATGGATGTTTTGTCAGTCTGTGTGTATGTGT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTTTATGTAAATGGATGTTTTGTCAGTCTGTGTGTATGTGT  695

seq1  ACCACATGTGGGCCTGGTGCCCCTAGAGGTCAGAAAAGGGTGTTGGAACT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATGTGGGCCTGGTGCCCCTAGAGGTCAGAAAAGGGTGTTGGAACT  745

seq1  CCCTGAAGATGGAGTTAAAGGTGGTTGTTAGCGGTCATGTGTGCTGGGAA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAAGATGGAGTTAAAGGTGGTTGTTAGCGGTCATGTGTGCTGGGAA  795

seq1  AAAACTTGCGTCCTCTGCAAGAGCAGCCAGTGCTCTTAACCTCTAGGTCA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTGCGTCCTCTGCAAGAGCAGCCAGTGCTCTTAACCTCTAGGTCA  845

seq1  TCTCCCCGGGATCAATAAAGCACAATTTTAAAAGCAGCTTAGGGTGCAAG  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCGGGATCAATAAAGCACAATTTTAAAAGCAGCTTAGGGTGCAAG  895

seq1  TTAACAATGGCATATATGTTGGGAAATGCTACACTACAGCACTGAAAGAG  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAATGGCATATATGTTGGGAAATGCTACACTACAGCACTGAAAGAG  945

seq1  TCAGGAGTCTCTAAATCACAGGTCAAAGAAATCAGCGAGGCTGGAAGTTC  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGTCTCTAAATCACAGGTCAAAGAAATCAGCGAGGCTGGAAGTTC  995

seq1  AAAACTCAGGTTCATATTCAAAGAGCCTTTGTGGGCTCTGGCATGAGGAG  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCAGGTTCATATTCAAAGAGCCTTTGTGGGCTCTGGCATGAGGAG  1045

seq1  TCTAGTGCAGAAAAAAACAATGAAGAAGGAAGAAAGCCATTATTTGAAAT  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTGCAGAAAAAAACAATGAAGAAGGAAGAAAGCCATTATTTGAAAT  1095

seq1  AAACTTTTATTTTTCCCTCTATTTATTCTTTCCTCCATCCTTTTCTTATA  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTTATTTTTCCCTCTATTTATTCTTTCCTCCATCCTTTTCTTATA  1145

seq1  ATGAATTC  1144
      ||||||||
seq2  ATGAATTC  1153

seq1: chr19_12711078_12711716
seq2: B6Ng01-318K15.g_339_999

seq1  TAGATACCCAAAGGTTTTCCAGACAGTTAAAACATCAAAAGAAGCCGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATACCCAAAGGTTTTCCAGACAGTTAAAACATCAAAAGAAGCCGGGC  50

seq1  ATGGTGGTGCACGCTTTTCATCCCAGCACTCGGGAGGCAGTGGCAGGCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGTGCACGCTTTTCATCCCAGCACTCGGGAGGCAGTGGCAGGCGG  100

seq1  ATTTTTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGC  150

seq1  CAGGGCTATACAGAGAAACCCTGTCTCAAAAAACAAAACAAAACAAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTATACAGAGAAACCCTGTCTCAAAAAACAAAACAAAACAAAAAC  200

seq1  AAAAAAAAACAAAACAAAAAAAAACATCAAAAGAGTCTTAGATTGGAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAACAAAACAAAAAAAAACATCAAAAGAGTCTTAGATTGGAGAC  250

seq1  AGAGGTGAGAAATGTGTGGCTGGAAGGGTTCTGAAAATAGCTAGAGATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGAGAAATGTGTGGCTGGAAGGGTTCTGAAAATAGCTAGAGATAA  300

seq1  TTTTGCCTCTGAGTGTACAATATCTCAGTTCTCCACAACTACAGACTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCTCTGAGTGTACAATATCTCAGTTCTCCACAACTACAGACTTCT  350

seq1  GATTAGTTGTCCAGCTTTGTGGAGTACTTAAC-TTAGGTATGCTTTCCTG  399
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GATTAGTTGTCCAGCTTTGTGGAGTACTTAACTTTAGGTATGCTTTCCTG  400

seq1  GAACTTCT--GTTCAC-AACT-AAGCAGCCGGTTCTGGACTTTTACTCCA  445
      ||||||||   ||||| |||| ||||||||||||||||||||||||||||
seq2  GAACTTCTTGTTTCACAAACTAAAGCAGCCGGTTCTGGACTTTTACTCCA  450

seq1  TTGATCTATTTGTTTAT-CCTTTTGCCAAGGTACTCTGCCTTGATAACA-  493
      ||||||||||||||||| ||||||||||||||||||||||||||||||| 
seq2  TTGATCTATTTGTTTATCCCTTTTGCCAAGGTACTCTGCCTTGATAACAT  500

seq1  TCTGCTTTTGATTAATAACAAGGCTTATTACAC-TTACATGAA-TTTCAT  541
      ||||||||||||||||||||||||||||||||| ||||||||| ||||||
seq2  TCTGCTTTTGATTAATAACAAGGCTTATTACACTTTACATGAATTTTCAT  550

seq1  C-AGCAGTTGTG-TCCCG-TCCCACAAATGCAAATGGAA-CCTGGGGGGG  587
      | | |||||||| ||||| |||||||||||||||||||| ||||||||||
seq2  CAACCAGTTGTGTTCCCGTTCCCACAAATGCAAATGGAACCCTGGGGGGG  600

seq1  --TTTCA-TGATGG-ATTAG-ATCAACTTGTAG-ATAACTAGAA-TTTTA  630
        ||||| |||||| | ||| |||||| ||||| |||||||||| |||||
seq2  GTTTTCATTGATGGAAATAGAATCAACCTGTAGAATAACTAGAATTTTTA  650

seq1  TTTT--ATTTT  639
      ||||  |||||
seq2  TTTTTAATTTT  661