BAC Information

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BAC

Clone NameB6Ng01-318K19
Chromosome19 (Build37)
Map Location 12,942,842 - 12,943,726
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444
Downstream geneOlfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318K19.bB6Ng01-318K19.g
ACCGA108500GA108501
length9851,149
definitionB6Ng01-318K19.b B6Ng01-318K19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgtttacattcatatgtacatgcatttatgtggttatatctct
atctctatctctatctctatctctatctctatctctatctctatctctat
ctctatctctatcatctatatctaatctacatctacatctatatatatct
atataatataatataatataatataatataatataatataatataatata
aatgagtacatattttaaagtgttccctttgtgtgtgaactctgtgtagg
aaatggaaaaacaaaagcctgagaatttcttgacaacttgcaactagaat
ttcagtcatagactctccagatccacacaacctgcttacaaaacttttat
aaataatattaatgatacaattatcataattagaaagaaaattctttttt
ctttcatttaaatttttctgtaatatattacatggtgactgcagtatcct
ctgcccccccagcccttccctactatattttctctctcccatttccaccc
ttttttgcctctcctcagaaaaaaaacaggtctcccagggacttcaaaga
agcttggcataatagacgttaagactaggcacatcccatcccatctaggc
tgtataaggcaaccaataggagggaaggtgtcccataaagtaggcaaaag
agtccggtacaatccctgacctcattgttaggattcccaccagaacaaca
agacaatcagctacaacatatatacaggagacctaggtcagacgcctgca
gacttcccaatctctgcaaaaccccatgagtcctagtcagttgattctgt
gggcattctatggtgttcctgtccactctggttcctctgattcttccttt
tcctcctgcacagactcccagaactccatctaatgtttgactgtggtact
ctgtatctgttcccatcagttgctagatgaagtctctcttagtatcttga
tgatggttctgctaggctagagtccagatcacttt
gaattccttacaatcccattggacaaggaatagttgaacgtgctcatcgc
accttaaagaattggcttttcaaaacaaaagaggggcagctatttcaccc
aaggtcaccaaaggctcaccttgcctttaccttatttattctaaattttt
tgcaaactgatattaaaggtcagtctgcagtggatcgccattggcatcca
gttacttctaattcttctgcattggtaaaatggaagaacccccagactaa
cgaatgaaagggtccagatccggttctaatttggggaaggggctcagttt
gtgttttttcacaagatgaagatggagcacggtggctgccagagagatta
attcatcagatgaacacagattctgactcttctcgtaagtatcattctga
agactaaaattcctcttgtgcttagaattcagctgggaacggaagctccc
agaaaaactgtttttctgctactctctgagcctgctatccgacaggaggc
tggagattaacctcagctttactatttgcaattgaataaagtacctgact
tccccaaaagaatatctgctttcctactttctcactgtctagattttgtt
tttcaagcaggttaatcaacattctccagctggaccagcagatgtgcatc
cccgcccccctagagcacacaggtggcaactgctatcttcattaccagga
cattccagcacatggccttcggtctgatttgaaatttaggtttaccaaga
gggctaaaagagcagataagagattggtttttattttgatagacgggcct
agtcccttagctggcctctggcttttcacccttgctgttactgcaaggtg
tccttagttcctcagctatgggaataacaggaatgaggaggaatgacttc
cagctcctattttagccacaatcatggtgtactaatgacataattcttgc
ctaggccttgctaaatctgagtgacaattctcctttaggagctgcacagt
actcagaactgtgcatactgctcgtgatcatacaaaatacagtatggcta
tcactgctgcagaagaaactacctgccgagaagtcagcttgaccatttgg
attactgtgatataccgggttagaatagagattgggtattcttaaaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12942842_12943726
seq2: B6Ng01-318K19.b_45_934

seq1  GAATTCATGTTTACATTCATATGTACATGCATTTATGTGGTTATATCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTTTACATTCATATGTACATGCATTTATGTGGTTATATCTCT  50

seq1  ATCTCTATCTCTATCTCTATCTCTATCTCTATCTCTATCTCTATCTCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTATCTCTATCTCTATCTCTATCTCTATCTCTATCTCTATCTCTAT  100

seq1  CTCTATCTCTATCATCTATATCTAATCTACATCTACATCTATATATATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATCTCTATCATCTATATCTAATCTACATCTACATCTATATATATCT  150

seq1  -----ATATAATATAATATAATATAATATAATATAATATAATATAATATA  195
           |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATATAATATAATATAATATAATATAATATAATATAATATAATATA  200

seq1  AATGAGTACATATTTTAAAGTGTTCCCTTTGTGTGTGAACTCTGTGTAGG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTACATATTTTAAAGTGTTCCCTTTGTGTGTGAACTCTGTGTAGG  250

seq1  AAATGGAAAAACAAAAGCCTGAGAATTTCTTGACAACTTGCAACTAGAAT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAAAAACAAAAGCCTGAGAATTTCTTGACAACTTGCAACTAGAAT  300

seq1  TTCAGTCATAGACTCTCCAGATCCACACAACCTGCTTACAAAACTTTTAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCATAGACTCTCCAGATCCACACAACCTGCTTACAAAACTTTTAT  350

seq1  AAATAATATTAATGATACAATTATCATAATTAGAAAGAAAATTCTTTTTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATATTAATGATACAATTATCATAATTAGAAAGAAAATTCTTTTTT  400

seq1  CTTTCATTTAAATTTTTCTGTAATATATTACATGGTGACTGCAGTATCCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATTTAAATTTTTCTGTAATATATTACATGGTGACTGCAGTATCCT  450

seq1  CTGCCCCCCCAGCCCTTCCCTACTATATTTTCTCTCTCCCATTTCCACCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCCCCAGCCCTTCCCTACTATATTTTCTCTCTCCCATTTCCACCC  500

seq1  TTTTTTGCCTCTCCTCAGAAAAAAAACAGGTCTCCCAGGGACTTCAAAGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGCCTCTCCTCAGAAAAAAAACAGGTCTCCCAGGGACTTCAAAGA  550

seq1  AGCTTGGCATAATAGACGTTAAGACTAGGCACATCCCATCCCATCTAGGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGCATAATAGACGTTAAGACTAGGCACATCCCATCCCATCTAGGC  600

seq1  TGTATAAGGCAACCAATAGGAGGGAAGGTGTCCCATAAAGTAGGCAAAAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAGGCAACCAATAGGAGGGAAGGTGTCCCATAAAGTAGGCAAAAG  650

seq1  AGTCCGGTACAATCCCTGACCTCATTGTTAGGATTCCCACCAGAACAACA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCGGTACAATCCCTGACCTCATTGTTAGGATTCCCACCAGAACAACA  700

seq1  AGACAATCAGCTACAACATATATACAGGAGACCTAGGTCAGACGCCTGCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATCAGCTACAACATATATACAGGAGACCTAGGTCAGACGCCTGCA  750

seq1  GACTTCCCAATCTCTGCAAAACCCCATGAGTCCTAGTCAGTTGATTCTGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCCAATCTCTGCAAAACCCCATGAGTCCTAGTCAGTTGATTCTGT  800

seq1  GGGCATTCTATGGTGTTCCTGTCCACTCTGGTTCCTCTGATTCTTCCTTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATTCTATGGTGTTCCTGTCCACTCTGGTTCCTCTGATTCTTCCTTT  850

seq1  TCCTCCTGCACAGACTCCCAGAACTCCATCTAATGTTTGA  885
      ||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTGCACAGACTCCCAGAACTCCATCTAATGTTTGA  890