BAC Information

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BAC

Clone NameB6Ng01-319O18
Chromosome19 (Build37)
Map Location 33,004,229 - 33,193,061
singlet/doubletdoublet
Overlap genenone
Upstream gene1810073H04Rik, Asah2, EG668042, Sgms1, 2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1, Papss2, Atad1, Pten, B430203M17Rik
Downstream gene6530404N21Rik, LOC638381, EG668095, LOC628236, AI747699, EG668106, EG668112, EG668114, EG329055, EG433241, LOC668127, Lipf, Lipk, EG383462, Lipn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319O18.bB6Ng01-319O18.g
ACCGA109433GA109434
length8801,098
definitionB6Ng01-319O18.b B6Ng01-319O18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,192,426 - 33,193,061)(33,004,229 - 33,005,337)
sequence
gaattcccaatttctcaattgtgtattcaatcaaggaaggcccagattgt
gtggagcctgaagtctctgaagtcagagggacaaggtgaaagaagatcat
gagatgcattcaatgagaaaattaaaaaattatgaagatgaaattcaacc
cagggcctcagagagatgcatgtaagggtgacagctgggtttcattggcc
tctgtatgttcatctccttatatgttattaagcctccatgcattcacttt
tgattgtcacatcgtgattactgccaactctcttgctaagacaagtaatg
attcccaaactgaaaaatgttcatcctacaaaaagcaaactacagattca
gtgcaatggccccctcaaaattccagtccagttcttcatagaaatcggaa
tacaaaagcaaagacagccaaccttaaactccatatggaaacccacatac
acattaggatccttaaataaccttgatcaataaaataactactggaaata
ccatctttcctgattttaaactgtacaaataaagtgcactatagtaataa
aaacaatgtggtactgacatttaaaaacacatatttgtcaatgaaataga
actgaagaccctgacctaagctcatatacctttggacacctgatgtttgc
caatacagtaaaaaataaatactggagaaaagacagcgtcttcaacaaat
gattctggccaaactagatagctacagagaagaatgaaaattaaggcatg
tctcttaccttgcacaaaactcagctccaggtgtataaagggcctcaata
agatctgatactcctgcaaactttatatgtcccaatacaggtgaatgcta
gggccaagaagagggagtgggtgtgtaggg
gaattcagcctggaggcttgatgaatcctctttgaatatgtgaaaatttt
cttgggacctgaaggatttggggagtgagaagtggcagagagggtttaat
cagggagatgagtataatcaagaataacttaactagggtgtggtcaatta
ggagggatagagagaaatgggcagaacccagacctgcaggactttccata
tgtctaggaggaatttagtccttatccttatagactggaggtcacctaga
ccttttaagaaactgtctataatcccatttggattcctcctttgggtttt
atgagatggcatgtggctgcagatcttctgtgtgattgccatgttagctc
cagccccagtggaaaacaactgcagaaataaagcatcacattggttttgc
tgcttatgctcaggaaatgggtgccagcaatttttgagaaagagcttacc
aggacagtgaggacagaagcagtctaagagcttagaaggactggatgaca
aagcacagaaggaaaatttgattgttccaagctcaaattgtaatcaggtc
ttgctcatcactcctctgttatcattagtggtactcacaatggcttgaac
ttctctactgcaactcctgttgaaatgtaatccccactgtgcattattaa
ggggctggaaacttaatctaatggtggcacttggaggtgaggcctttggg
aggtaattaggattagatgaggtcatgggcatgggacctccacagttgca
ttagtggttgaataagaagagggagagagaccaaagccagcatgtttgct
gtgtctcagcacgtgagtccctctgctgcagtgtcctatccaacaagaca
gacctcacaagatgcagcccttccttgactgtcaacctcaagagctaaga
gccgaataaactttttttgtttgtaaatgacctagtcagtggtactcagt
atagcactaatggaaatatgccagtagatatagtaccacagctactgtct
atataaactacaggccattgttttctagctgtattatatttaccatgtat
atgaatattttggagactctgccgaactgtagataggaatccattgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_33192426_33193061
seq2: B6Ng01-319O18.b_50_685 (reverse)

seq1  TCCAAAGGTATATGAGCTTAGGTCAGGGTCTTCAGTTCTATTTCATTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGGTATATGAGCTTAGGTCAGGGTCTTCAGTTCTATTTCATTGAC  50

seq1  AAATATGTGTTTTTAAATGTCAGTACCACATTGTTTTTATTACTATAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGTGTTTTTAAATGTCAGTACCACATTGTTTTTATTACTATAGTG  100

seq1  CACTTTATTTGTACAGTTTAAAATCAGGAAAGATGGTATTTCCAGTAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTATTTGTACAGTTTAAAATCAGGAAAGATGGTATTTCCAGTAGTT  150

seq1  ATTTTATTGATCAAGGTTATTTAAGGATCCTAATGTGTATGTGGGTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTGATCAAGGTTATTTAAGGATCCTAATGTGTATGTGGGTTTCC  200

seq1  ATATGGAGTTTAAGGTTGGCTGTCTTTGCTTTTGTATTCCGATTTCTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGAGTTTAAGGTTGGCTGTCTTTGCTTTTGTATTCCGATTTCTATG  250

seq1  AAGAACTGGACTGGAATTTTGAGGGGGCCATTGCACTGAATCTGTAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTGGACTGGAATTTTGAGGGGGCCATTGCACTGAATCTGTAGTTT  300

seq1  GCTTTTTGTAGGATGAACATTTTTCAGTTTGGGAATCATTACTTGTCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTGTAGGATGAACATTTTTCAGTTTGGGAATCATTACTTGTCTTA  350

seq1  GCAAGAGAGTTGGCAGTAATCACGATGTGACAATCAAAAGTGAATGCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAGAGTTGGCAGTAATCACGATGTGACAATCAAAAGTGAATGCATG  400

seq1  GAGGCTTAATAACATATAAGGAGATGAACATACAGAGGCCAATGAAACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTAATAACATATAAGGAGATGAACATACAGAGGCCAATGAAACCC  450

seq1  AGCTGTCACCCTTACATGCATCTCTCTGAGGCCCTGGGTTGAATTTCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCACCCTTACATGCATCTCTCTGAGGCCCTGGGTTGAATTTCATC  500

seq1  TTCATAATTTTTTAATTTTCTCATTGAATGCATCTCATGATCTTCTTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAATTTTTTAATTTTCTCATTGAATGCATCTCATGATCTTCTTTCA  550

seq1  CCTTGTCCCTCTGACTTCAGAGACTTCAGGCTCCACACAATCTGGGCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTCCCTCTGACTTCAGAGACTTCAGGCTCCACACAATCTGGGCCTT  600

seq1  CCTTGATTGAATACACAATTGAGAAATTGGGAATTC  636
      ||||||||||||||||||||||||||||||||||||
seq2  CCTTGATTGAATACACAATTGAGAAATTGGGAATTC  636

seq1: chr19_33004229_33005337
seq2: B6Ng01-319O18.g_70_1167

seq1  GAATTCAGCCTGGAGGCTTGATGAATCCTCTTTGAATATGTGAAAATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCTGGAGGCTTGATGAATCCTCTTTGAATATGTGAAAATTTT  50

seq1  CTTGGGACCTGAAGGATTTGGGGAGTGAGAAGTGGCAGAGAGGGTTTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGACCTGAAGGATTTGGGGAGTGAGAAGTGGCAGAGAGGGTTTAAT  100

seq1  CAGGGAGATGAGTATAATCAAGAATAACTTAACTAGGGTGTGGTCAATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGATGAGTATAATCAAGAATAACTTAACTAGGGTGTGGTCAATTA  150

seq1  GGAGGGATAGAGAGAAATGGGCAGAACCCAGACCTGCAGGACTTTCCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGATAGAGAGAAATGGGCAGAACCCAGACCTGCAGGACTTTCCATA  200

seq1  TGTCTAGGAGGAATTTAGTCCTTATCCTTATAGACTGGAGGTCACCTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAGGAGGAATTTAGTCCTTATCCTTATAGACTGGAGGTCACCTAGA  250

seq1  CCTTTTAAGAAACTGTCTATAATCCCATTTGGATTCCTCCTTTGGGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAAGAAACTGTCTATAATCCCATTTGGATTCCTCCTTTGGGTTTT  300

seq1  ATGAGATGGCATGTGGCTGCAGATCTTCTGTGTGATTGCCATGTTAGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATGGCATGTGGCTGCAGATCTTCTGTGTGATTGCCATGTTAGCTC  350

seq1  CAGCCCCAGTGGAAAACAACTGCAGAAATAAAGCATCACATTGGTTTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCAGTGGAAAACAACTGCAGAAATAAAGCATCACATTGGTTTTGC  400

seq1  TGCTTATGCTCAGGAAATGGGTGCCAGCAATTTTTGAGAAAGAGCTTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATGCTCAGGAAATGGGTGCCAGCAATTTTTGAGAAAGAGCTTACC  450

seq1  AGGACAGTGAGGACAGAAGCAGTCTAAGAGCTTAGAAGGACTGGATGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGTGAGGACAGAAGCAGTCTAAGAGCTTAGAAGGACTGGATGACA  500

seq1  AAGCACAGAAGGAAAATTTGATTGTTCCAAGCTCAAATTGTAATCAGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAGAAGGAAAATTTGATTGTTCCAAGCTCAAATTGTAATCAGGTC  550

seq1  TTGCTCATCACTCCTCTGTTATCATTAGTGGTACTCACAATGGCTTGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCATCACTCCTCTGTTATCATTAGTGGTACTCACAATGGCTTGAAC  600

seq1  TTCTCTACTGCAACTCCTGTTGAAATGTAATCCCCACTGTGCATTATTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTACTGCAACTCCTGTTGAAATGTAATCCCCACTGTGCATTATTAA  650

seq1  GGGGCTGGAAACTTAATCTAATGGTGGCACTTGGAGGTGAGGCCTTTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTGGAAACTTAATCTAATGGTGGCACTTGGAGGTGAGGCCTTTGGG  700

seq1  AGGTAATTAGGATTAGATGAGGTCATGGGCATGGGACCTCCACAGTTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAATTAGGATTAGATGAGGTCATGGGCATGGGACCTCCACAGTTGCA  750

seq1  TTAGTGGTTGAATAAGAAGAGGGAGAGAGACCAAAGCCAGCATGTTTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGGTTGAATAAGAAGAGGGAGAGAGACCAAAGCCAGCATGTTTGCT  800

seq1  GTGTCTCAGCACGTGAGTCCCTCTGCTGCAGTGTCCTATCCAACAGGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTGTCTCAGCACGTGAGTCCCTCTGCTGCAGTGTCCTATCCAACAAGACA  850

seq1  GACCTCACAAGATGCAGCCCTTCCTTGACTGTCAACCTCAAGAGCTAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCACAAGATGCAGCCCTTCCTTGACTGTCAACCTCAAGAGCTAAGA  900

seq1  GCCGAATAAACTTTTTTTGTTTGTAAATGACCTAGTCAGTGGTACTCAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCCGAATAAACTTTTTTTGTTTGTAAATGACCTAGTCAGTGGTACTCAG-  949

seq1  TATAGCAACTAATGGAAATAATGCCAGTAAGAATATAGTACCACAGCTAC  1000
      |||||| |||||||||||| |||||||||   ||||||||||||||||||
seq2  TATAGC-ACTAATGGAAAT-ATGCCAGTA--GATATAGTACCACAGCTAC  995

seq1  TGTCTATATAAAACTACAGGGCCCATTGTTTTCTAGCTGTA-TATATTTA  1049
      ||||||||| ||||||||||  ||||||||||||||||||| ||||||||
seq2  TGTCTATAT-AAACTACAGG--CCATTGTTTTCTAGCTGTATTATATTTA  1042

seq1  CACATGTATATGATTAATTTTTGAGACTCTGCCCAAAATGTAGATAGTAT  1099
      | ||||||||||| | ||||| ||||||||| || || ||||||||| | 
seq2  C-CATGTATATGAAT-ATTTTGGAGACTCTG-CCGAACTGTAGATAGGAA  1089

seq1  TCCCATTGTA  1109
      | ||||||||
seq2  T-CCATTGTA  1098