BAC Information

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BAC

Clone NameB6Ng01-322G13
Chromosome19 (Build37)
Map Location 20,661,559 - 20,662,716
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042218, LOC100041541, Anxa1, LOC100041560, 1500015L24Rik, E030003E18Rik, EG626549
Downstream geneAldh1a1, Aldh1a7, Tmc1, LOC100042287, LOC100042294, LOC100041602, LOC100041613, Zfand5, Gda, LOC100041633
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322G13.bB6Ng01-322G13.g
ACCGA111256GA111257
length1,1511,010
definitionB6Ng01-322G13.b B6Ng01-322G13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaactcctgagggaaggggtttaatgaagacatttcatttag
gactgaattttccaaaattttctcactgtctggaagttgtccgatagtga
gtctctatataagtcgaatctacttctagacaaagctgctctagaggaat
gagtaaggcctgatttatggctatagcaaaatgaataggcaaatattgag
ctctgattaaaaaaaaatctgccttgtaattctatgaattggtggttaaa
tgatcaaatattgcatactttttaaagtcaccaataaataaatgtttgtt
tcctaagccaaacacagttggattggtttttctaaatctaaggtccaccc
cttttagaaaaaaaattatttgagttcatataattacagagtatgctagg
aaaattgagcaaggtactgttgaaaactctctgttaaaagaaaatattac
ttaaataaggataacgcttatttttattattgaaaaagtgataattaaaa
attcagaatggttatagaatatttctgtagtgggctcctgggaagacgga
caaacaacacctcaaccaataaaaccaaacaataaaacaacacccccaat
aaacaacaaagctaaacgaataaatactaaaaccaggtgattttgcaatt
agaaaaaaaaaaaattaggccaaagcttcctcttgacccccgtgcaaaga
acactagtaagtgctttaaagaaacttctgtgctgtgactcttcagtaga
taaaaccttacatctgtatttatcactctgaactcatgctgatatctgag
gatatgaccaagtagactttggaaaatctgggccatactcatcttcagtt
acagctaagaaccccaagtaacaaaactcaaagccctctgctaaaatgtc
tacttattatctctcctttatgggtttaaaatcctgtcatatttgggaaa
tgtaaatactgtttgagatactgggaatttcattgggacatttcccatat
gatgatggtctgatatagtgaaactcaaacaaagatgcatgatatcctct
cagtagcatgtttttatacactgctactactagggtcttttactttactg
gttaagtcttcatgtttaaaaagatccaatgtccaatggctccatagaac
a

gaattccattacatttttaatatttttatggggttgtattgaatttgtag
gttgcttttgttgagacatttccacaatattggttattctaattcattag
tctttaggaaatatgaccagcagttgtatagctgagtcatatgccagttc
tgtttttaattttttttggaaaacttccatagtgattttcatagtggctg
tactaggttacacccccaccagcaataaataatttctcttttctaaaacc
tcaccaacacttgtctttgtctcatctcttgatgatagccattgttattg
gatcgaagtgcaatctcaaaatcattttactgacatttctatgatggcta
atgattcggaatacttttataagtatctagtggacattgtgttttctctt
ttgagaactttcaattcataggttagcctatttatcctatttattgcctg
catttgtgttctgttttggtgttaatatttctagttatttatatagtcta
ggtattgcttcctgccagattaataactgccatagattatctcctatatt
ttagttatctgttatttttttcttagcggatagtctctctctctctctct
ctctctctctctctctctctctctctctctctctctctctcttcttgggc
tgtattttctgctatgggagtcttattcagaaagttcttacctacacaaa
ttttacatgttttcctagcaatttcagcttttaaactaatttaaccaatt
tttgtgcagagtgacagattttgaatgtatttattcttctgtatatgcat
atccaggtttttacagcaccatttatagaattagatatttgaatttccag
tctatgttgcgacagctcatttgaaaatttacccacagctatgaggttta
ctatcatattatattgctcacatggtttttgtcatgccattactatataa
tccttttccaaggctcaggtgtgtatcaaaagatcaagaggtactatacg
tatagaagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_20661559_20662716
seq2: B6Ng01-322G13.b_47_1197 (reverse)

seq1  TGTTCTAT-GAGCATATTGACATTTGAATCTTTTTAAACATGAAGACTTT  49
      |||||||| ||||   | |||| ||| |||||||||||||||||||||| 
seq2  TGTTCTATGGAGCCATTGGACA-TTGGATCTTTTTAAACATGAAGACTTA  49

seq1  ACCAGGTAAAGTAAAAGA-CCTAGTAAGTAAGCAGTTGGTATAAAAACAT  98
      |||| ||||||||||||| |||||| ||| ||||||  ||||||||||||
seq2  ACCA-GTAAAGTAAAAGACCCTAGT-AGT-AGCAGT--GTATAAAAACAT  94

seq1  GGCTACTGAGAGGATATCATGCAATCTTTGTTTGAGTTTCACTATAATCA  148
       ||||||||||||||||||||| |||||||||||||||||||||| ||| 
seq2  -GCTACTGAGAGGATATCATGC-ATCTTTGTTTGAGTTTCACTAT-ATC-  140

seq1  AGACCATCATCATATGGGAAATGTCCCAATGAAATTCCCAGTATCTCAAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATCATCATATGGGAAATGTCCCAATGAAATTCCCAGTATCTCAAA  190

seq1  CAGTATTTACATTT-CCAAATATGACAGGATTTTAAACCCATAAAGGAGA  247
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CAGTATTTACATTTCCCAAATATGACAGGATTTTAAACCCATAAAGGAGA  240

seq1  GATAATAAGTAGACATTTTAGCAGAGGGCTTTGAGTTTTGTTACTTGGGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATAAGTAGACATTTTAGCAGAGGGCTTTGAGTTTTGTTACTTGGGG  290

seq1  TTCTTAGCTGTAACTGAAGATGAGTATGGCCCAGATTTTCCAAAGTCTAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGCTGTAACTGAAGATGAGTATGGCCCAGATTTTCCAAAGTCTAC  340

seq1  TTGGTCATATCCTCAGATATCAGCATGAGTTCAGAGTGATAAATACAGAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCATATCCTCAGATATCAGCATGAGTTCAGAGTGATAAATACAGAT  390

seq1  GTAAGGTTTTATCTACTGAAGAGTCACAGCACAGAAGTTTCTTTAAAGCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTTTTATCTACTGAAGAGTCACAGCACAGAAGTTTCTTTAAAGCA  440

seq1  CTTACTAGTGTTCTTTGCACGGGGGTCAAGAGGAAGCTTTGGCCTAATTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTAGTGTTCTTTGCACGGGGGTCAAGAGGAAGCTTTGGCCTAATTT  490

seq1  TTTTTTTTTCTAATTGCAAAATCACCTGGTTTTAGTATTTATTCGTTTAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCTAATTGCAAAATCACCTGGTTTTAGTATTTATTCGTTTAG  540

seq1  CTTTGTTGTTTATTGGGGGTGTTGTTTTATTGTTTGGTTTTATTGGTTGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTGTTTATTGGGGGTGTTGTTTTATTGTTTGGTTTTATTGGTTGA  590

seq1  GGTGTTGTTTGTCCGTCTTCCCAGGAGCCCACTACAGAAATATTCTATAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTGTTTGTCCGTCTTCCCAGGAGCCCACTACAGAAATATTCTATAA  640

seq1  CCATTCTGAATTTTTAATTATCACTTTTTCAATAATAAAAATAAGCGTTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTGAATTTTTAATTATCACTTTTTCAATAATAAAAATAAGCGTTA  690

seq1  TCCTTATTTAAGTAATATTTTCTTTTAACAGAGAGTTTTCAACAGTACCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATTTAAGTAATATTTTCTTTTAACAGAGAGTTTTCAACAGTACCT  740

seq1  TGCTCAATTTTCCTAGCATACTCTGTAATTATATGAACTCAAATAATTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAATTTTCCTAGCATACTCTGTAATTATATGAACTCAAATAATTTT  790

seq1  TTTTCTAAAAGGGGTGGACCTTAGATTTAGAAAAACCAATCCAACTGTGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAAAAGGGGTGGACCTTAGATTTAGAAAAACCAATCCAACTGTGT  840

seq1  TTGGCTTAGGAAACAAACATTTATTTATTGGTGACTTTAAAAAGTATGCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTAGGAAACAAACATTTATTTATTGGTGACTTTAAAAAGTATGCA  890

seq1  ATATTTGATCATTTAACCACCAATTCATAGAATTACAAGGCAGATTTTTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGATCATTTAACCACCAATTCATAGAATTACAAGGCAGATTTTTT  940

seq1  TTTAATCAGAGCTCAATATTTGCCTATTCATTTTGCTATAGCCATAAATC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCAGAGCTCAATATTTGCCTATTCATTTTGCTATAGCCATAAATC  990

seq1  AGGCCTTACTCATTCCTCTAGAGCAGCTTTGTCTAGAAGTAGATTCGACT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTACTCATTCCTCTAGAGCAGCTTTGTCTAGAAGTAGATTCGACT  1040

seq1  TATATAGAGACTCACTATCGGACAACTTCCAGACAGTGAGAAAATTTTGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGAGACTCACTATCGGACAACTTCCAGACAGTGAGAAAATTTTGG  1090

seq1  AAAATTCAGTCCTAAATGAAATGTCTTCATTAAACCCCTTCCCTCAGGAG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCAGTCCTAAATGAAATGTCTTCATTAAACCCCTTCCCTCAGGAG  1140

seq1  TTAAAGAATTC  1158
      |||||||||||
seq2  TTAAAGAATTC  1151


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