BAC Information

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BAC

Clone NameB6Ng01-327A10
Chromosome19 (Build37)
Map Location 14,474,122 - 14,610,894
singlet/doubletdoublet
Overlap geneEG667433, Tle4
Upstream geneOlfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505
Downstream geneEG433225, EG635497, Pomc-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327A10.bB6Ng01-327A10.g
ACCGA114678GA114679
length8741,116
definitionB6Ng01-327A10.b B6Ng01-327A10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,610,029 - 14,610,894)(14,474,122 - 14,475,241)
sequence
gaattcttaatctctttattttatatacataatatatgtatatctacatt
gtgtgtgtgtgtgtgtgtgtgtttatgtatatgtgtatattttggtcttc
cacttttctgtgataatttcttgtgttatttcaccatgcagcatcaccag
ttgccattcagattgcttgtgggctcagcctagcttttgtatacctcaaa
aaatggagagggtagaacaaacccaggatctaagggagagacggacttac
ctggaacaagcgtgactgactgtgcatgactctcgggactttgggaaagg
cgtaaggacttttaatctgaacactcagaattcctaagaaactaatttta
ggtttcttctaccaaaaagtgcatttgtgccatcaatgctgtcttaaaga
tttttgtggaaagattagattaaaaagggttagataagtcagttgccaca
catttctcttcctcaattcagcacttgttctgatgccttcattaccctgt
tcagtattttcacttgagggccctcaaattacacctatcttacttaggat
ttgggagttgtaagttttctggtattacattttactgcccaaatctacct
taacacatcttaattaattaattaattaccagacggggtttctctgtgta
gccctggctatcctggaaacttactctgtagaccatgctggcctcaaact
cagaaaatccacctgcctctgcctcccaagtgctgggattaaaagcgtgc
accaccactgcccagaaatttattttatttttatttattttatttttttt
accacccaccgttctgccctattttcttttcctttaaagataagtaattt
tttaatttttccaggcttaattta
gaattcaacactgacttgtgggaagggaaggagagaaaagacaatgtcaa
taaaaacatactcaaatttttggttattgatatgtgcctttgattttaag
actgataagattgagtagagaccagttgtttaataactcttgggcaaaat
gtaactcagaaattctcgtagaatctatgcatatgcacaaatcaaaatgg
ttgtagaattcccttttgggttttcatgctttggtaaggagatttcttgt
attatacagacagccttcattctgtctatggccactcttttgaggaattg
caatccttaaggattccctgcttcaaagggccattgtccatgatgttgag
tggttgacatcgcacaaagcaatcaacattttgtatccatggattccaca
tgcagggattcaactaaattacaactgagaagatctgaggaaagtaaatt
gtctccactggacattcccaaatggtttttccttgtcatgattcctaaac
aatatagtctaataaccatttgccttgcaaaaataacctacttagcattg
tgagacatctaaagatgatgtcagtgcaggagggctgggtgtcagctaaa
ggcaaggcattttggtgtctcaggagtatgtgttctggaaccaatcagcc
ggaggcactaaggggcagctgtttatctttattggcttatataaccaatt
gattaatcaggtcatttccccttaattctgaatcaagcacaatctggagt
ttagatatacagtagcagaattcagtaaggctttgtgaaagatgaactac
tgtgtctccactcattttcacactaagagagatgaacataaaacaaatgg
ggtagaactatatgggggatttaccaaacttttatatctctttaaataga
atgctctacatatccttctaaacaagaaaaacaaacttgggatgacaggt
atagttctgtttattacgtcttaatttaaatttccttactagggaggcag
aatagaaaaacatacctagaaatactcaatttcttgggctttaagacttt
tggtgatctttttcaatcttatttcactgctgctaatttcgaatccgtaa
gtatcaagtattattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_14610029_14610894
seq2: B6Ng01-327A10.b_45_918 (reverse)

seq1  TAAA-TAAGCCT-GAAAAATTAAAAAA-TACTTATCTTTAAAG--AAAGA  45
      |||| ||||||| |||||||||||||| |||||||||||||||  |||||
seq2  TAAATTAAGCCTGGAAAAATTAAAAAATTACTTATCTTTAAAGGAAAAGA  50

seq1  AAATAGGGCAGAACGGT-GGTGGTAAAAAAAAATAAAATAAAT-AAAATA  93
      ||||||||||||||||| |||||| |||||||||||||||||| ||||||
seq2  AAATAGGGCAGAACGGTGGGTGGT-AAAAAAAATAAAATAAATAAAAATA  99

seq1  AAATAAAATTCTGGGCAGTGGTGGTGCACGCTTTTAATCCCAGCACTTGG  143
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATTTCTGGGCAGTGGTGGTGCACGCTTTTAATCCCAGCACTTGG  149

seq1  GAGGCAGAGGCAGGTGGA-TTTCTGAGTTTGAGGCCAGCCTGGTCTACAG  192
      |||||||||||||||||| |||||||||||||||||||| ||||||||||
seq2  GAGGCAGAGGCAGGTGGATTTTCTGAGTTTGAGGCCAGCATGGTCTACAG  199

seq1  AGTAAG-TTCCAGGATAGCCAGGGCTACACAGAGAAACCCCGTCTGGTAA  241
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTTTCCAGGATAGCCAGGGCTACACAGAGAAACCCCGTCTGGTAA  249

seq1  TTAATTAATTAATTAAGATGTGTTAAGGTAGATTTGGGCAGTAAAATGTA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAATTAATTAAGATGTGTTAAGGTAGATTTGGGCAGTAAAATGTA  299

seq1  ATACCAGAAAACTTACAACTCCCAAATCCTAAGTAAGATAGGTGTAATTT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGAAAACTTACAACTCCCAAATCCTAAGTAAGATAGGTGTAATTT  349

seq1  GAGGGCCCTCAAGTGAAAATACTGAACAGGGTAATGAAGGCATCAGAACA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCCCTCAAGTGAAAATACTGAACAGGGTAATGAAGGCATCAGAACA  399

seq1  AGTGCTGAATTGAGGAAGAGAAATGTGTGGCAACTGACTTATCTAACCCT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGAATTGAGGAAGAGAAATGTGTGGCAACTGACTTATCTAACCCT  449

seq1  TTTTAATCTAATCTTTCCACAAAAATCTTTAAGACAGCATTGATGGCACA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATCTAATCTTTCCACAAAAATCTTTAAGACAGCATTGATGGCACA  499

seq1  AATGCACTTTTTGGTAGAAGAAACCTAAAATTAGTTTCTTAGGAATTCTG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCACTTTTTGGTAGAAGAAACCTAAAATTAGTTTCTTAGGAATTCTG  549

seq1  AGTGTTCAGATTAAAAGTCCTTACGCCTTTCCCAAAGTCCCGAGAGTCAT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCAGATTAAAAGTCCTTACGCCTTTCCCAAAGTCCCGAGAGTCAT  599

seq1  GCACAGTCAGTCACGCTTGTTCCAGGTAAGTCCGTCTCTCCCTTAGATCC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTCAGTCACGCTTGTTCCAGGTAAGTCCGTCTCTCCCTTAGATCC  649

seq1  TGGGTTTGTTCTACCCTCTCCATTTTTTGAGGTATACAAAAGCTAGGCTG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTGTTCTACCCTCTCCATTTTTTGAGGTATACAAAAGCTAGGCTG  699

seq1  AGCCCACAAGCAATCTGAATGGCAACTGGTGATGCTGCATGGTGAAATAA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCACAAGCAATCTGAATGGCAACTGGTGATGCTGCATGGTGAAATAA  749

seq1  CACAAGAAATTATCACAGAAAAGTGGAAGACCAAAATATACACATATACA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGAAATTATCACAGAAAAGTGGAAGACCAAAATATACACATATACA  799

seq1  TAAACACACACACACACACACACACAATGTAGATATACATATATTATGTA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACACACACACACACACACACAATGTAGATATACATATATTATGTA  849

seq1  TATAAAATAAAGAGATTAAGAATTC  866
      |||||||||||||||||||||||||
seq2  TATAAAATAAAGAGATTAAGAATTC  874

seq1: chr19_14474122_14475241
seq2: B6Ng01-327A10.g_69_1184

seq1  GAATTCAACACTGACTTGTGGGAAGGGAAGGAGAGAAAAGACAATGTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACACTGACTTGTGGGAAGGGAAGGAGAGAAAAGACAATGTCAA  50

seq1  TAAAAACATACTCAAATTTTTGGTTATTGATATGTGCCTTTGATTTTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACATACTCAAATTTTTGGTTATTGATATGTGCCTTTGATTTTAAG  100

seq1  ACTGATAAGATTGAGTAGAGACCAGTTGTTTAATAACTCTTGGGCAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATAAGATTGAGTAGAGACCAGTTGTTTAATAACTCTTGGGCAAAAT  150

seq1  GTAACTCAGAAATTCTCGTAGAATCTATGCATATGCACAAATCAAAATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTCAGAAATTCTCGTAGAATCTATGCATATGCACAAATCAAAATGG  200

seq1  TTGTAGAATTCCCTTTTGGGTTTTCATGCTTTGGTAAGGAGATTTCTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAATTCCCTTTTGGGTTTTCATGCTTTGGTAAGGAGATTTCTTGT  250

seq1  ATTATACAGACAGCCTTCATTCTGTCTATGGCCACTCTTTTGAGGAATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACAGACAGCCTTCATTCTGTCTATGGCCACTCTTTTGAGGAATTG  300

seq1  CAATCCTTAAGGATTCCCTGCTTCAAAGGGCCATTGTCCATGATGTTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTTAAGGATTCCCTGCTTCAAAGGGCCATTGTCCATGATGTTGAG  350

seq1  TGGTTGACATCGCACAAAGCAATCAACATTTTGTATCCATGGATTCCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGACATCGCACAAAGCAATCAACATTTTGTATCCATGGATTCCACA  400

seq1  TGCAGGGATTCAACTAAATTACAACTGAGAAGATCTGAGGAAAGTAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGGATTCAACTAAATTACAACTGAGAAGATCTGAGGAAAGTAAATT  450

seq1  GTCTCCACTGGACATTCCCAAATGGTTTTTCCTTGTCATGATTCCTAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCACTGGACATTCCCAAATGGTTTTTCCTTGTCATGATTCCTAAAC  500

seq1  AATATAGTCTAATAACCATTTGCCTTGCAAAAATAACCTACTTAGCATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGTCTAATAACCATTTGCCTTGCAAAAATAACCTACTTAGCATTG  550

seq1  TGAGACATCTAAAGATGATGTCAGTGCAGGAGGGCTGGGTGTCAGCTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACATCTAAAGATGATGTCAGTGCAGGAGGGCTGGGTGTCAGCTAAA  600

seq1  GGCAAGGCATTTTGGTGTCTCAGGAGTATGTGTTCTGGAACCAATCAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGCATTTTGGTGTCTCAGGAGTATGTGTTCTGGAACCAATCAGCC  650

seq1  GGAGGCACTAAGGGGCAGCTGTTTATCTTTATTGGCTTATATAACCAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCACTAAGGGGCAGCTGTTTATCTTTATTGGCTTATATAACCAATT  700

seq1  GATTAATCAGGTCATTTCCCCTTAATTCTGAATCAAGCACAATCTGGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATCAGGTCATTTCCCCTTAATTCTGAATCAAGCACAATCTGGAGT  750

seq1  TTAGATATACAGTAGCAGAATTCAGTAAGGCTTTGTGAAAGATGAACTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATATACAGTAGCAGAATTCAGTAAGGCTTTGTGAAAGATGAACTAC  800

seq1  TGTGTCTCCACTCATTTTCACACTAAAGAGAGATGAACATAAAACAAATG  850
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGTGTCTCCACTCATTTTCACACT-AAGAGAGATGAACATAAAACAAATG  849

seq1  GGGTAGAACTATATGGGGGATTTACCAAACTTTTATATCTCTTTAAATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGAACTATATGGGGGATTTACCAAACTTTTATATCTCTTTAAATAG  899

seq1  AATGCTCTACATATCCTTCTAAACAAGAAAAACAAACTT-GGATGACAGG  949
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AATGCTCTACATATCCTTCTAAACAAGAAAAACAAACTTGGGATGACAGG  949

seq1  TATAGTTCTGTTTATTACGTCTTAATTTAAATTTCCTTACTAGGGAGGCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTCTGTTTATTACGTCTTAATTTAAATTTCCTTACTAGGGAGGCA  999

seq1  GAATAG-AAAACATACCTAGAAAATACTCAATTTCTTTGGGCTTTAAGAC  1048
      |||||| ||||||||||||| |||||||||||||| ||||||||||||||
seq2  GAATAGAAAAACATACCTAG-AAATACTCAATTTC-TTGGGCTTTAAGAC  1047

seq1  TTTTGTTGATCTTTT--CATCTTATTTTCACTGTTGTTTATTTCGAATTC  1096
      ||||| |||||||||   |||||| |||||||| || | |||||||||  
seq2  TTTTGGTGATCTTTTTCAATCTTA-TTTCACTGCTGCTAATTTCGAAT--  1094

seq1  CCTTAAAGTAATCAAGTATTATTT  1120
      || | |||| ||||||||||||||
seq2  CCGT-AAGT-ATCAAGTATTATTT  1116