BAC Information

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BAC

Clone NameB6Ng01-328D03
Chromosome19 (Build37)
Map Location 35,828,427 - 35,829,628
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC676714, Pank1, Mphosph1, LOC383464, LOC100042292
Downstream geneA830019P07Rik, Htr7, Rpp30, Ankrd1, LOC668195, Pcgf5, LOC668201, Hectd2, LOC668215, Ppp1r3c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328D03.bB6Ng01-328D03.g
ACCGA115525GA115526
length1,0281,186
definitionB6Ng01-328D03.b B6Ng01-328D03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagcagaggaatactgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcaggaaaatacaaatcaaaacaactttgagat
tccacctcacaccagtcagaacggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctgaactgctggtg
ggactgcaagcttttacaaccactctggaagtcagtctggagtttcctca
gaaaattggacatgatacctctcctgggcatatacccagaagatgttaca
actggtaataagaacacaggctccactatgttcatagcagccttatttat
aatagccagaagctggaaagaacccagatgtccctcaacagaagaatgga
tacagaaaatgtgatacatttacataatggagtactactcagctattaaa
aagaatggatttatgaaatacttggacaaatggatgtatctggaggatat
catccttagtgaggtaacccaatcacaaaagaagtcactagatatgcact
cactgataagtggatattagcccagaaacatagaacacccaagatacaat
ttgcaaaacacaagaaaatcaagaagaggaaagaacaatgggtagatact
tcattcttccttagaatagggaacataatacccacgtaaggagttacaga
gacaaagtttggagctaagatgaaaggatggactatccagagactacccc
acctggggatccatcccataatcgtctaccaaacccggacactattgcat
atgccagaaggattttgctgaagagaccctgttatagctgtctcatatga
ggctatgccagtgcctggcaaatacagaagtggatgctcacagtcatcta
taagatggaacacagggccccagtggagaagctagagaaagtacccaagg
agatgaaggggtctgcaaccctagaggtggaacaataatatgcactaacc
agtactcccagagcttgtatctctagct
gaattctagaaatattgagacttgctgtcctgccaaaccctgcaactggg
tttgggacctgtgatggatgagttttgttctgtggatgcaattaccactt
ttcatcagggccaaatgactcccctcttcacaccagggagccacctggct
ggaatctcctacctgcttgactccttgacctgttaaattttctccaaggc
acaatagatgagtaaaagtttctttcctattgccgcagtcgatgacatta
aaacacatcctcacatcctattgttaaatatgggacacggggacacttta
ttcaaaatgagttggtagacctataggtaagaagaaatacacaccctaag
atagaacatgaattaatataagaaagaaaatatacaaagtgccaccagga
agtgatttcactaataatatttataggtaatttgcttaatccatttttat
caagtttctcttatgtgcgaagcaaaccattcagaaatcaggtttctaga
cactgtctagcctgtcttttgaggggagccatgaagaaaatcttgatggc
taggcaagaatatttctagacaaatataggatggtccatattgatcagga
catactttctgaagtactcacagagactttttgtttattcagtttagact
ctagcttgagatcaccaacaaaatatcagtggatgataggctgaataatg
tcctcttgtgaaagtcaggcaactgtttgatttctgtcttttgtggtttt
taaatcttccatgattattaaagtttcttttatgaaattgccaatcactt
tcaccagggccgaatgactccctgtttcccaccagggatccatctggctg
gagttctcttgcctgttttattgccaccccttgacctgtcaaagtttttc
caaggcacaattaacaagttaaagttgtatgaatcaataatccaatttgc
aagcttcttattaccttaattgaagttagtaattaataaaacatacattt
attgaggattctgcactccagtggtctctgtggtatcaatgagacagact
atatgcttgttgtgaaaggttgaacttctactgatagtattactacaatt
aatcacatgtacagtagcctcagggattggatcctgtgccagtgtatgag
tcttcctaaaagtatgtgaccagtgctcatctgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_35828427_35829628
seq2: B6Ng01-328D03.g_68_1253 (reverse)

seq1  ACACA-ATGA-CACT-GTCAC-TACTTTTAGGAAGACTTCTATCACCTGC  46
      ||||| |||| |||| ||||| ||||||||||||||||  || || ||| 
seq2  ACACAGATGAGCACTGGTCACATACTTTTAGGAAGACTCATA-CA-CTGG  48

seq1  CACAGGAATCTACAATACCCTGA-GCTACCTTGTAACATTGTGATTTATT  95
      |||||||   | |||| |||||| |||||  ||| ||| ||||||| |||
seq2  CACAGGA---TCCAAT-CCCTGAGGCTAC--TGT-ACA-TGTGATTAATT  90

seq1  GTAATTAATTACTATTCAGTAAGAAGGTCAAACCTTTCCACACAAGCATT  145
      ||| |  | ||||| ||||| ||||| || ||||||||   ||||||| |
seq2  GTAGT--AATACTA-TCAGT-AGAAGTTC-AACCTTTCACAACAAGCA-T  134

seq1  ATAGTCTGTTCTCCATTGATACCACAGAGACCACTGGAGTGCAGAATCCT  195
      |||||||| ||| |||||||||||||||||||||||||||||||||||||
seq2  ATAGTCTG-TCT-CATTGATACCACAGAGACCACTGGAGTGCAGAATCCT  182

seq1  CAATAAATGTATGTTTTATTAATTACTTAACTTCAAATTAAGGTAATAAG  245
      |||||||||||||||||||||||||| ||||||| |||||||||||||||
seq2  CAATAAATGTATGTTTTATTAATTAC-TAACTTC-AATTAAGGTAATAAG  230

seq1  AAAGCTTGCAAATTGGATTATTGATTCATACAACTTTAACTTGTTAATTG  295
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AAGCTTGCAAATTGGATTATTGATTCATACAACTTTAACTTGTTAATTG  279

seq1  TGCCTTGGAAAAACTTTGACAGGTCAAGGGGTGGCAATAAAACAGGCAAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGGAAAAACTTTGACAGGTCAAGGGGTGGCAATAAAACAGGCAAG  329

seq1  AGAACTCCAGCCAGATGGATCCCTGGTGGGAAACAGGGAGTCATTCGGCC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCCAGCCAGATGGATCCCTGGTGGGAAACAGGGAGTCATTCGGCC  379

seq1  CTGGTGAAAGTGATTGGCAATTTCATAAAAGAAACTTTAATAATCATGGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGAAAGTGATTGGCAATTTCATAAAAGAAACTTTAATAATCATGGA  429

seq1  AGATTTAAAAACCACAAAAGACAGAAATCAAACAGTTGCCTGACTTTCAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAAAAACCACAAAAGACAGAAATCAAACAGTTGCCTGACTTTCAC  479

seq1  AAGAGGACATTATTCAGCCTATCATCCACTGATATTTTGTTGGTGATCTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGACATTATTCAGCCTATCATCCACTGATATTTTGTTGGTGATCTC  529

seq1  AAGCTAGAGTCTAAACTGAATAAACAAAAAGTCTCTGTGAGTACTTCAGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAGAGTCTAAACTGAATAAACAAAAAGTCTCTGTGAGTACTTCAGA  579

seq1  AAGTATGTCCTGATCAATATGGACCATCCTATATTTGTCTAGAAATATTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATGTCCTGATCAATATGGACCATCCTATATTTGTCTAGAAATATTC  629

seq1  TTGCCTAGCCATCAAGATTTTCTTCATGGCTCCCCTCAAAAGACAGGCTA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTAGCCATCAAGATTTTCTTCATGGCTCCCCTCAAAAGACAGGCTA  679

seq1  GACAGTGTCTAGAAACCTGATTTCTGAATGGTTTGCTTCGCACATAAGAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTGTCTAGAAACCTGATTTCTGAATGGTTTGCTTCGCACATAAGAG  729

seq1  AAACTTGATAAAAATGGATTAAGCAAATTACCTATAAATATTATTAGTGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGATAAAAATGGATTAAGCAAATTACCTATAAATATTATTAGTGA  779

seq1  AATCACTTCCTGGTGGCACTTTGTATATTTTCTTTCTTATATTAATTCAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTTCCTGGTGGCACTTTGTATATTTTCTTTCTTATATTAATTCAT  829

seq1  GTTCTATCTTAGGGTGTGTATTTCTTCTTACCTATAGGTCTACCAACTCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATCTTAGGGTGTGTATTTCTTCTTACCTATAGGTCTACCAACTCA  879

seq1  TTTTGAATAAAGTGTCCCCGTGTCCCATATTTAACAATAGGATGTGAGGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAATAAAGTGTCCCCGTGTCCCATATTTAACAATAGGATGTGAGGA  929

seq1  TGTGTTTTAATGTCATCGACTGCGGCAATAGGAAAGAAACTTTTACTCAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTAATGTCATCGACTGCGGCAATAGGAAAGAAACTTTTACTCAT  979

seq1  CTATTGTGCCTTGGAGAAAATTTAACAGGTCAAGGAGTCAAGCAGGTAGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGTGCCTTGGAGAAAATTTAACAGGTCAAGGAGTCAAGCAGGTAGG  1029

seq1  AGATTCCAGCCAGGTGGCTCCCTGGTGTGAAGAGGGGAGTCATTTGGCCC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCAGCCAGGTGGCTCCCTGGTGTGAAGAGGGGAGTCATTTGGCCC  1079

seq1  TGATGAAAAGTGGTAATTGCATCCACAGAACAAAACTCATCCATCACAGG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAAAAGTGGTAATTGCATCCACAGAACAAAACTCATCCATCACAGG  1129

seq1  TCCCAAACCCAGTTGCAGGGTTTGGCAGGACAGCAAGTCTCAATATTTCT  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAACCCAGTTGCAGGGTTTGGCAGGACAGCAAGTCTCAATATTTCT  1179

seq1  AGAATTC  1202
      |||||||
seq2  AGAATTC  1186