BAC Information

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BAC

Clone NameB6Ng01-331H01
Chromosome12 (Build37)19 (Build37)
Map Location 120,923,048 - 120,923,32533,720,886 - 33,720,927
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG668615, LOC620665, Sp8, Abcb5, Itgb8, EG627557, LOC100043011, 4732474O15Rik, LOC668632
Downstream geneLOC668633, Gm528, LOC100043017
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331H01.bB6Ng01-331H01.g
ACCGA117804GA117805
length270812
definitionB6Ng01-331H01.b B6Ng01-331H01.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(120,923,048 - 120,923,325)(33,720,886 - 33,720,927)
sequence
tcttttccttattttttaagagttctattttatttttatattacttgggt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttgttatctgcacatcaat
acagtacacagagcaatcagaggcattggatgttcctgaatctgtgattg
taggctttgtgagccaccagatataaatgctggaaactaatcttgggtcc
cctggaagcacagtacgcatttttagcttcctagtcatctcccaacctct
gctcctatttactttttttt
gaattctttgtttagctctgagtcgcattttttaatggggtaatttgatt
ttctggaatccatcttcttgagttatttatatatattggatattagtacc
ctatctgatttaggataggtaaagatcctttcacaatctgttggtgggct
ttttatcttaatgacggtgtcttttgccttacagaagttttgtaatttta
cgaggtcccatttgtcgattctcgatcttacatcacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcttcgaggcttttccctac
tttctcctctataagtttcactgtctctggtttcatgtggagttccttga
tccacttagatttgaccttagtacaaggagataggaatggatcaatttgc
attcttccatttgttgaaaatgctgtcttttttccactggatggttttag
ctcccttgtcaaaggtcaagagaccataggtgtttgggctcatttctggg
tcgttgatttcattgttctacttgtctgtcgctataccagtaccatgcag
tttttaaaaaaaatatatttattaggtattttcctcatttacatttccaa
tgctatcccaaaagtcccccataccctcgccccccccccactcccctacc
cacccactcccattttttggccctggcattccccctgtactggggcatat
aaagtttgcaagtccaatggattttctgtatattgaaccattcctgcatc
cctggggatgaaacctactttggtcagatggaatgattgcttgattgtgt
tcttggattcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_120923048_120923325
seq2: B6Ng01-331H01.b_52_321

seq1  TCTTTTCCTTATTTTTTAAGAGTTCTATTTTATTTTTATATTACTTGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  TCTTTTCCTTATTTTTTAAGAGTTCTATTTTATTTTTATATTACTTGG--  48

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTTATCTGC  100
            ||||||||||||||||||||||||||||||||||||||||||||
seq2  ------GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTTATCTGC  92

seq1  ACATGAATACAGTACACAGAGCAGTCAGAGGCATTGGATGTTCCTGAAGC  150
      |||| |||||||||||||||||| |||||||||||||||||||||||| |
seq2  ACATCAATACAGTACACAGAGCAATCAGAGGCATTGGATGTTCCTGAATC  142

seq1  TGGGATTGTAGGCTTTGTGAGCCACCAGATATAAATGCTGGAAACTAAAC  200
      || ||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGTGATTGTAGGCTTTGTGAGCCACCAGATATAAATGCTGGAAACTAATC  192

seq1  TTGGGTCCCCTGGAAGCACAGTACGCATTTTTAGCTACAGAGTCATCTCC  250
      |||||||||||||||||||||||||||||||||||| |  ||||||||||
seq2  TTGGGTCCCCTGGAAGCACAGTACGCATTTTTAGCTTCCTAGTCATCTCC  242

seq1  CAACCCCTGCTCCAAGTTACTTTTTTTT  278
      ||||| ||||||| | ||||||||||||
seq2  CAACCTCTGCTCCTATTTACTTTTTTTT  270

seq1: chr19_33720886_33720927
seq2: B6Ng01-331H01.g_839_880 (reverse)

seq1  CCGAATCCAAGAACACATTAAAGCAATCA-TCCATCCTGACCA  42
      ||||||||||||||||| | ||||||||| ||||| |||||||
seq2  CCGAATCCAAGAACACAATCAAGCAATCATTCCAT-CTGACCA  42