BAC Information

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BAC

Clone NameB6Ng01-338B21
Chromosome19 (Build37)
Map Location 13,863,105 - 13,864,280
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp91, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496
Downstream geneOlfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-338B21.bB6Ng01-338B21.g
ACCGA122520GA122521
length1,1571,179
definitionB6Ng01-338B21.b B6Ng01-338B21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgttatatgtcccattcatctttcccaattttgaggtcccagat
gtataaatctcgttttaattctaggtattttttttctctaatattttaaa
taaccacttaaagcattcagggttttcctgaaaatactaattattgttat
ttctcactagttaacaaaattttaaaatgttgaattatacatatttttag
aattatttttgtactatcataattgcattctgatttttgctttacgaaag
tttattccatatgccaaaatagccacaaatttaactcaggaaactattgt
acttatgtgtgtgcataatttatatgtgtatgtaatttctctcctcaaag
tatctttgtactctttatagtttcttatatcccctttcttaccacttcct
caccccatccaaaagaaccactcttcagctttttgtcatattttattagt
aaattttgtagaatttcatataaatttacacaataagttatgaaatgatg
cattgttcatttcactagtattttttagagtaattaactctttggcatac
atgactaggctactttttatggttggacattgctatatgccatggataca
acattctgtgtttgtttatgtatgtgtttgtggacattggcatagtttct
aatttctactgttttattttggatatttcttttttatcaattaatttatt
ttttacactctatatttattccccattcacctgtccaccctctgactgtt
ccacataccatacctcctccccaactccctgtctccatgtggatgtctgt
tagagaccataccgtgagaaagtaagccttttgcagtttcccatcctaat
aagccaaatggccttgtgctcagagccggtcacctcctcctccccatccc
ttcctagcacctaagaccctaaaagattgaattatagtcccctcttcctt
atctcttcctgactcccagacttctaaggacctgagttatgtgctgagcc
cagcttgacatcccaggctgtaagaagatctacattctgcgatagactca
gcttcatgtcccagatgctactctttgttcttgtagttcccctagccatt
cctatttccctggtgtgcctatactgccttttcaagctataaacagactt
gacaaga
gaattctcacccgaggaatatcaaatgactgagaagcacctgaaaaaatg
ttcaacattcttaatcatcagagaaatgcaaatcaaaataaccctgagat
tccatctcacacgagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagagcaacactgctccattgttggtg
ggatagcaagcttgtacaaccactctgaaaatcagtctggtggttcctta
gaaaattggacatagtactaccggaggatcccgcaatacctctcctggcc
atatatccagaagatgtcccaatgggtaagaaggacacatgctccactat
gttcatagcaggcttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaattcatgaaattcctaggcaa
atggatgaacctggagggcatcatcctgagtgacacaatcacaaaggaac
tcacacagtatgtattcactgataagtgaatattagcccagaaccttagt
atagcgagatataaggtacaatttgcaaaacacatgaaactgaagaagaa
ccaagaccaaagtgtggacactttgccccttcttagaattggaaactatc
acccatggaaggagttacagagacaaagtttggagctgagacaaaaggat
ggaccatctagagactgccatatccagggttccatcccataattagcctc
caaagaagacaccattgcatacactagcaagcgtttgttgtaaaggaccg
tgatatagctgtctctcgtgagactaggcaggggcctagcaaacacagaa
gtgatgctcacagtcaactattggacagatcacagggccccaatgagagc
tagagaaagtatccaagagctaaagagatctgcaacccagtagtgcacat
tatgactactataccccgagctcttgactctagctgcatatgtatcaaag
atgctagtgcatcagtggaagagaggcccttggacagtcacctttatatg
ctcagtacagggacgccaggctaaaatggtaatggttgcctaaggcagtt
gcgcttcactcttgtcagtattcatagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13863105_13864280
seq2: B6Ng01-338B21.b_44_1200 (reverse)

seq1  TCTTGTCAAGGTCTGTTTATTAGGCTGAAAAAGCCAGGTTATAAGCACA-  49
      ||||||||| ||||||||||   |||  ||||| |||  |||| ||||| 
seq2  TCTTGTCAA-GTCTGTTTAT--AGCTTGAAAAGGCAG--TATAGGCACAC  45

seq1  CAGGGAAATAGGGATGGGCTAGGGGGAACTAACAAAGAACAAAGAAGTAG  99
      |||||||||||| || ||||| |||||||||   |||||||||| |||| 
seq2  CAGGGAAATAGGAAT-GGCTA-GGGGAACTA--CAAGAACAAAG-AGTA-  89

seq1  GCATCTGGGGACATGAAGGCCTGAGTCTTATCGCAGGAATGTAGATTCCT  149
      |||||| |||||||||||  ||||||| ||||||| ||||||||||  ||
seq2  GCATCT-GGGACATGAAG--CTGAGTC-TATCGCA-GAATGTAGAT--CT  132

seq1  TCTTAACAGCCTGGGATGTCAAGCTGGGCTCAGCACATAACTCAGGTCCT  199
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTT-ACAGCCTGGGATGTCAAGCTGGGCTCAGCACATAACTCAGGTCCT  181

seq1  TAGAAGTCTTGGGAGTCAGGAAGAGATAAGGAAGAGGGGACTATAATTCA  249
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTC-TGGGAGTCAGGAAGAGATAAGGAAGAGGGGACTATAATTCA  230

seq1  ATCTTTTAGGGTCTTAGGTGCTAGGAAGGGATGGGGAGGAGGAGGTGACC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTAGGGTCTTAGGTGCTAGGAAGGGATGGGGAGGAGGAGGTGACC  280

seq1  GGCTCTGAGCACAAGGCCATTTGGCTTATTAGGATGGGAAACTGCAAAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGAGCACAAGGCCATTTGGCTTATTAGGATGGGAAACTGCAAAAG  330

seq1  GCTTACTTTCTCACGGTATGGTCTCTAACAGACATCCACATGGAGACAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACTTTCTCACGGTATGGTCTCTAACAGACATCCACATGGAGACAGG  380

seq1  GAGTTGGGGAGGAGGTATGGTATGTGGAACAGTCAGAGGGTGGACAGGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGGGGAGGAGGTATGGTATGTGGAACAGTCAGAGGGTGGACAGGTG  430

seq1  AATGGGGAATAAATATAGAGTGTAAAAAATAAATTAATTGATAAAAAAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGAATAAATATAGAGTGTAAAAAATAAATTAATTGATAAAAAAGA  480

seq1  AATATCCAAAATAAAACAGTAGAAATTAGAAACTATGCCAATGTCCACAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCAAAATAAAACAGTAGAAATTAGAAACTATGCCAATGTCCACAA  530

seq1  ACACATACATAAACAAACACAGAATGTTGTATCCATGGCATATAGCAATG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACATAAACAAACACAGAATGTTGTATCCATGGCATATAGCAATG  580

seq1  TCCAACCATAAAAAGTAGCCTAGTCATGTATGCCAAAGAGTTAATTACTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCATAAAAAGTAGCCTAGTCATGTATGCCAAAGAGTTAATTACTC  630

seq1  TAAAAAATACTAGTGAAATGAACAATGCATCATTTCATAACTTATTGTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATACTAGTGAAATGAACAATGCATCATTTCATAACTTATTGTGT  680

seq1  AAATTTATATGAAATTCTACAAAATTTACTAATAAAATATGACAAAAAGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATATGAAATTCTACAAAATTTACTAATAAAATATGACAAAAAGC  730

seq1  TGAAGAGTGGTTCTTTTGGATGGGGTGAGGAAGTGGTAAGAAAGGGGATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGTGGTTCTTTTGGATGGGGTGAGGAAGTGGTAAGAAAGGGGATA  780

seq1  TAAGAAACTATAAAGAGTACAAAGATACTTTGAGGAGAGAAATTACATAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAACTATAAAGAGTACAAAGATACTTTGAGGAGAGAAATTACATAC  830

seq1  ACATATAAATTATGCACACACATAAGTACAATAGTTTCCTGAGTTAAATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAAATTATGCACACACATAAGTACAATAGTTTCCTGAGTTAAATT  880

seq1  TGTGGCTATTTTGGCATATGGAATAAACTTTCGTAAAGCAAAAATCAGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTATTTTGGCATATGGAATAAACTTTCGTAAAGCAAAAATCAGAA  930

seq1  TGCAATTATGATAGTACAAAAATAATTCTAAAAATATGTATAATTCAACA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATTATGATAGTACAAAAATAATTCTAAAAATATGTATAATTCAACA  980

seq1  TTTTAAAATTTTGTTAACTAGTGAGAAATAACAATAATTAGTATTTTCAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAATTTTGTTAACTAGTGAGAAATAACAATAATTAGTATTTTCAG  1030

seq1  GAAAACCCTGAATGCTTTAAGTGGTTATTTAAAATATTAGAGAAAAAAAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCCTGAATGCTTTAAGTGGTTATTTAAAATATTAGAGAAAAAAAA  1080

seq1  TACCTAGAATTAAAACGAGATTTATACATCTGGGACCTCAAAATTGGGAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAGAATTAAAACGAGATTTATACATCTGGGACCTCAAAATTGGGAA  1130

seq1  AGATGAATGGGACATATAACAGAATTC  1176
      |||||||||||||||||||||||||||
seq2  AGATGAATGGGACATATAACAGAATTC  1157