MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-338F20
Chromosome	19 (Build37)
Map Location	54,968,753 - 55,154,300
singlet/doublet	doublet
Overlap gene	Gpam
Upstream gene	Pdcd4, 2310002J21Rik, Shoc2, Adra2a, LOC100043004
Downstream gene	Tectb, Gucy2g, Acsl5, Zdhhc6, Vti1a, LOC100043479, Tcf7l2, Ppnr
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pdcd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18569 MGI:107490
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310002J21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66360 MGI:1913610
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 46 ESTs

name	Shoc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56392 MGI:1927197
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adra2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11551 MGI:87934
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043004 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043004
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Gpam (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14732 MGI:109162
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tectb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21684 MGI:109574
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gucy2g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73707 MGI:106025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acsl5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433256 MGI:1919129
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zdhhc6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66980 MGI:1914230
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Vti1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53611 MGI:1855699
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043479 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043479
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Tcf7l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21416 MGI:1202879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppnr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26930 MGI:1349458
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pdcd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142356921 GeneID:18569 MGI:107490
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : programmed cell death 4 transcript_id : NM_011050.3

name	2310002J21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270574 GeneID:66360 MGI:1913610
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 46 ESTs product : RIKEN cDNA 2310002J21 gene transcript_id : XM_001480596.1

name	Shoc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372584 GeneID:56392 MGI:1927197
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : soc-2 (suppressor of clear) homolog (C. elegans) transcript_id : NM_019658.5

name	Adra2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:78711825 GeneID:11551 MGI:87934
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adrenergic receptor, alpha 2a transcript_id : NM_007417.2

name	LOC100043004 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270519 GeneID:100043004
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to cyclic nucleotide gated channel beta 1 transcript_id : XM_001479278.1

name	Gpam (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802122 GeneID:14732 MGI:109162
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycerol-3-phosphate acyltransferase, mitochondrial transcript_id : NM_008149.3

name	Tectb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130418 GeneID:21684 MGI:109574
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tectorin beta transcript_id : NM_009348.3

name	Gucy2g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487300 GeneID:73707 MGI:106025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanylate cyclase 2g transcript_id : NM_001081076.1

name	Acsl5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75992928 GeneID:433256 MGI:1919129
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-CoA synthetase long-chain family member 5 transcript_id : NM_027976.2

name	Zdhhc6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75992949 GeneID:66980 MGI:1914230
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, DHHC domain containing 6 transcript_id : NM_025883.3

name	Zdhhc6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75992951 GeneID:66980 MGI:1914230
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, DHHC domain containing 6 transcript_id : NM_001033573.1

name	Vti1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803384 GeneID:53611 MGI:1855699
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vesicle transport through interaction with t-SNAREs homolog 1A (yeast) transcript_id : NM_016862.3

name	LOC100043479 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270576 GeneID:100043479
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043479 transcript_id : XM_001480629.1

name	Tcf7l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543848 GeneID:21416 MGI:1202879
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcription factor 7-like 2, T-cell specific, HMG-box transcript_id : NM_009333.2

name	Pdcd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625656 CCDS:CCDS29903.1 GeneID:18569 MGI:107490
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005829 - cytosol [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0007569 - cell aging [Evidence ISS]; GO:0043508 - negative regulation of JNK activity [Evidence ISS]; GO:0016481 - negative regulation of transcription [Evidence ISS] codon_start : 1 product : programmed cell death 4 protein_id : NP_035180.2

name	2310002J21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270575 GeneID:66360 MGI:1913610
definition	codon_start : 1 product : hypothetical protein LOC66360 protein_id : XP_001480646.1

name	Shoc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543701 CCDS:CCDS29904.1 GeneID:56392 MGI:1927197
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : Ras-binding protein SUR-8; suppressor of clear, C. elegans, homolog of product : soc-2 (suppressor of clear) homolog protein_id : NP_062632.2

name	Adra2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78711826 CCDS:CCDS29905.1 GeneID:11551 MGI:87934
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004935 - adrenoceptor activity [Evidence IMP]; GO:0004938 - alpha2-adrenergic receptor activity [Evidence TAS]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0042596 - fear response [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : subtype alpha2-C10; alpha2A-adrenergic receptor product : adrenergic receptor, alpha 2a protein_id : NP_031443.2

name	LOC100043004 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270520 GeneID:100043004
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479328.1

name	Gpam (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34536827 CCDS:CCDS29906.1 GeneID:14732 MGI:109162
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0004366 - glycerol-3-phosphate O-acyltransferase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0044255 - cellular lipid metabolism [Evidence IEA]; GO:0006631 - fatty acid metabolism [Evidence IMP]; GO:0008152 - metabolism [Evidence IEA]; GO:0008654 - phospholipid biosynthesis [Evidence IEA]; GO:0040018 - positive regulation of body size [Evidence IMP] codon_start : 1 product : glycerol-3-phosphate acyltransferase, mitochondrial protein_id : NP_032175.2

name	Tectb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7363457 CCDS:CCDS29907.1 GeneID:21684 MGI:109574
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IDA] [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005201 - extracellular matrix structural constituent [Evidence IDA] [Evidence TAS]; GO:0048503 - GPI anchor binding [Evidence IEA] GO_process : GO:0007605 - sensory perception of sound [Evidence TAS] codon_start : 1 note : [b]-tectorin product : tectorin beta protein_id : NP_033374.2

name	Gucy2g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487301 GeneID:73707 MGI:106025
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence ISS] [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0004383 - guanylate cyclase activity [Evidence ISS] [Evidence IDA]; GO:0008528 - peptide receptor activity, G-protein coupled [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA] GO_process : GO:0006182 - cGMP biosynthesis [Evidence ISS] [Evidence IDA]; GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : guanylate cyclase 2g protein_id : NP_001074545.1

name	Acsl5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58218988 CCDS:CCDS29908.1 GeneID:433256 MGI:1919129
definition	EC_number : 6.2.1.3 GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0005777 - peroxisome [Evidence IEA] GO_process : GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 note : fatty acid Coenzyme A ligase, long chain 5 product : acyl-CoA synthetase long-chain family member 5 protein_id : NP_082252.1

name	Zdhhc6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75992952 CCDS:CCDS29909.1 GeneID:66980 MGI:1914230
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger, DHHC domain containing 6 protein_id : NP_001028745.1

name	Zdhhc6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75992950 CCDS:CCDS29909.1 GeneID:66980 MGI:1914230
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger, DHHC domain containing 6 protein_id : NP_080159.3

name	Vti1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13928668 CCDS:CCDS29910.1 GeneID:53611 MGI:1855699
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : vesicle transport through interaction with t-SNAREs 1 homolog product : vesicle transport through interaction with t-SNAREs homolog 1A protein_id : NP_058558.1

name	LOC100043479 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270577 GeneID:100043479
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480679.1

name	Tcf7l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543849 CCDS:CCDS29911.1 GeneID:21416 MGI:1202879
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : transcription factor 7-like 2 product : transcription factor 7-like 2, T-cell specific, HMG-box protein_id : NP_033359.2

name	Ppnr (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149270329 GeneID:26930 MGI:1349458
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : per-pentamer repeat gene transcript_id : XR_035714.1

clone name	MSMg01-412E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123P03
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-338F20.b	B6Ng01-338F20.g
ACC	GA122693	GA122694
length	1,132	1,140
definition	B6Ng01-338F20.b	B6Ng01-338F20.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(55,153,160 - 55,154,300)	(54,968,753 - 54,969,916)
sequence	gaattccaagttgtgtactgtggtgcccttgagcaccttaacacgacact ggtcatgagattaatgaatgtagagataggatggagcctgatgctgtgac ttcaaacctgctctttccctgctcgggtatgctggcttttcaccatgggt acccacaaggacaggagactacagtccatggcgtgcatgctatggcactt agtccaggcccctttagagctccagagggggcctgcaatttgggtcttgg tatttcattaaaggcattttgttgactgatctagcctacttgctctgggt tgaaggtggatctgtcttagaatgtggcctcgtggttaagtgattgctct gaagtcattttaccagggcactggcaaatccagttgcatttccactgtaa actgcagtttcaggaactatagtagaagacgtggttagctccacaggctt ctgtttaaagctaagcactttcaaggcctcatgtaagttagagcaaggcc agctaacactctctttctttccagccgccagcaagtcctgcgctatcatg tccacccacattgtggcctgtctgctcctctacagacacaggcaggtacg tcttaatgctccctcatgttccttggtagaagcctgggtgtttgttagcc tgtttgttaggctgaggctaggagaagaacagaaaaagaaggtcagcacc ctgccctgagcccagcagtccagcgagggaaagagccacactgtgaatac acacagtggaaggatactgtttctggttgctgtaggaaatggaaataagg catatttcaggacacagtatgcgttctgctggaaaagagtttccaggcag tttgctctgaatattagagcccctctgtcctcccacaataggcttgtgta gttctgccatggatagaccatgtctaccatattcattgtcatgctcttca catgagcgcttgtgacgtgtgtttaaagcaaagggaatcctcacgaacac ttggatacttggcactattgtcaggcgcttctctttccctttgtgctcag ttttgtgatgtgacatctgcccataacatctggggacagtgctttctact gctcatgtgctagtctggctgtctcttgtggc	gaattctttcatcatccttgccagtgaaatgcaagcaaaatcaagacgta tgcataaaccaatggtgtctctaggttccaagacagttctctgttgtaga tcccataggaggagacccacagaagtccagggtcaggaaataccagatgt agccagaaactttaaaggaaaaaaagatcttgatttataaaaaggggtga tatgcagacaggggagtcatttgtgtgcttagataaggttcctgaatata tcaactccaaccagaatttgaacataagtaagtgctacatgaagagtcca gtagaaacctctacatcaaacttttcctttaataaccagaaggaagagga ataaacacacacacacacacacacacacacactcagccttgatagagtga acaaggatttatcaataatttggttccatgtaagttaaagaaggaatcag catttcaatgtctacacattttttgttgcttttgttgcgagggatggagt ctcaatggattgccttgtatttagtgcaactaagcatcttgatgaagttc tttttgacttacaaaggtagcccaggagcccttgttgagatcaacactgg aaattaaactgttcttcatgatgaaatagtacaaatcttgaagattcttt tgtaaaagagctaaagaaagactcatatttaaaaataaaataaaaacaag gaaagaagattttcagcttctcggcctgggataaggttctcctcagaggt tatttgccaagatctaggaaaacatctacctgcaacagctggagaagaca tgctcacatctggcaagtagaataggcattctgcccaccattctttggtt catgggactgtcccacattaaaacactcactccttctgaaaggccagtag tgcagagatgtaaaacctatctccagaaggacagaaagacctgctcaata tccaggagatggggattaaagaaaaaaaaaggacgttctagtgagcagat gacccagaaatagaaatgatgttctcatggatttttatgtgctaaagtgc tagcttctcctctgtctctcccaaagtgatgtctatgtcactacttgtgc tggggtctagatatggaggaaagaaactcctcatggagga
quality values	Open. Hide. 62 47 33 33 62 62 25 10 47 62 62 62 47 47 47 62 56 54 62 62 62 62 59 62 49 49 62 62 62 49 37 35 46 62 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 59 59 62 62 62 59 62 62 62 42 54 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 54 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 49 58 58 58 58 58 58 58 58 54 54 42 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 52 58 58 58 58 58 58 58 58 58 58 58 54 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 52 54 58 52 52 58 54 58 58 58 54 58 58 51 49 51 58 58 58 58 58 54 50 51 58 49 58 54 41 41 58 49 51 51 58 51 51 54 58 48 58 58 51 53 58 40 58 58 46 46 58 58 58 58 58 58 58 50 58 58 58 49 51 50 52 58 58 49 58 50 58 58 58 46 54 50 49 51 35 58 58 58 29 51 50 49 46 37 58 38 12 58 58 32 58 50 50 53 36 58 58 58 58 58 41 58 41 26 44 31 52 52 41 52 50 37 54 58 50 50 50 54 51 41 43 49 23 54 58 50 32 34 50 38 29 29 40 50 42 39 53 40 41 42 54 53 46 54 51 39 54 31 49 54 34 47 34 31 35 39 39 35 51 35 45 37 50 32 49 40 44 37 45 32 31 30 37 30 15 52 28 22 35 40 38 54 35 54 52 34 42 52 47 26 53 40 42 53 42 32 37 23 45 53 54 37 32 31 32 51 53 28 31 28 27 13 38 21 30 42 34 32 49 34 37 32 12 51 34 31 33 31 25 32 33 40 32 32 37 35 52 31 32 35 45 34 32 29 38 37 51 46 41 24 33 18 37 51 31 16 31 26 30 31 24 32 31 29 51 33 41 33 31 30 31 30 33 31 31 31 25 30 37 24 42 26 32 48 46 31 31 31 31 32 28 27 34 31 31 41 24 16 28 22 31 30 27 29 32 24 31 28 42 29 31 31 34 21 29 22 31 31 37 35 31 26 27 29 28 7 17 33 32 36 24 22 15 24 35 21 31 33 30 19 21 14 27 29 19 27 27 19 27 21 41 20 32 23 31 38 24 32 28 22 18 19 22 29 24 32 32 33 10 35 31 31 26 18 26 13 23 32 22 24 24 32 24 31 20 44 25 25 48 28 31 28 18 43 20 18 43 22 33 29 23 19 21 32 32 21 18 12 33 22 19 15 16 18 21 17 26 7 12 24 32 23 22 21 20 21 21 28 20 27 29 16 19 7 19 9 26 26 21 21 21 33 22 28 19 20 16 34 21 7 28 18 21 33 16 12 9 22 7 14 20 27 13 26 47 40 21 19 6 7 22 20 20 13 19 8 6 6 10 16 20 7 7 31 13 13 12 9 27 10 6 6 5 5 7 28 21 20 14 11 6 7 5 3 5 3 25 10 9 4 14 10 20 12 11 11 10 19 9 8 18 11 16 11 6 7 3 2 7 15 11 3 1 5 9 4 6 9 16 9 8 4 6 20 5	Open. Hide. 62 38 39 47 62 62 56 49 49 31 28 49 28 24 56 59 62 62 62 62 62 59 43 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 62 54 54 59 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 49 49 62 62 62 62 62 62 62 62 62 62 47 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 54 49 46 41 45 58 58 58 58 58 58 58 58 58 58 58 58 58 54 54 58 58 54 58 58 58 58 45 58 44 58 58 54 58 54 58 54 58 58 58 58 58 58 54 58 54 58 58 58 58 58 54 54 58 58 58 54 58 58 54 58 58 58 58 58 58 49 47 58 58 51 50 50 51 50 58 58 50 54 53 53 58 51 53 51 58 46 50 48 41 47 58 51 58 58 58 58 58 47 46 41 53 52 58 53 53 58 51 58 58 58 58 48 37 47 51 58 58 51 54 58 40 47 51 50 58 52 52 51 54 58 33 51 54 58 49 50 58 52 53 53 50 51 58 50 51 53 52 58 58 58 51 37 39 26 51 51 39 58 58 58 58 41 50 58 54 35 37 54 38 52 51 51 49 39 40 54 54 51 44 44 22 49 41 42 54 52 44 36 42 34 38 38 54 53 45 27 54 54 45 52 37 54 54 54 42 46 30 37 37 54 37 54 40 45 52 53 40 31 26 54 54 52 40 40 34 41 53 53 42 39 52 37 47 27 49 34 38 36 40 31 29 31 21 12 33 13 41 36 41 31 51 39 43 40 29 51 24 47 25 31 31 39 53 41 33 25 25 21 52 32 32 28 29 32 30 28 42 42 46 41 31 32 26 43 36 43 31 25 22 30 31 42 31 30 40 30 31 31 31 31 46 31 25 51 42 23 31 18 18 31 39 31 42 31 26 31 26 42 31 30 25 31 24 31 28 27 30 30 26 38 32 27 31 17 43 28 31 31 35 30 31 31 32 46 22 25 30 19 24 31 30 31 30 46 29 23 27 15 27 28 23 32 31 46 36 24 22 31 37 27 28 33 18 21 28 29 36 36 37 46 46 24 26 21 23 31 31 25 27 42 32 29 21 37 30 27 32 37 48 14 24 25 19 24 31 30 25 32 16 27 37 23 32 21 38 9 19 20 33 30 31 43 41 16 5 22 31 25 34 32 34 22 32 16 24 29 24 11 12 25 15 22 19 28 31 24 22 29 11 15 22 32 23 30 31 18 17 23 26 32 17 25 21 17 13 30 13 13 12 32 48 39 25 15 19 26 14 47 10 21 31 47 47 47 47 47 40 47 24 21 9 3 3 3 7 9 20 24 24 24 14 20 20 24 13 25 8 18 5 3 3 3 21 15 13 10 22 38 20 21 12 10 16 38 24 13 23 26 20 27 18 22 8 3 11 18 11 18 13 13 13 33 34 27 10 17 10 21 16 17 7 11 7 27 25 9 16 23 20 21 24 8 16 11 5 6 9 6 4 9 7 5 11 9 21 5 6 18 7 29 17 5 27 13 7 4 6 11 3 6 6 12 7 12 12 8 6 5 3 4 13 13 17 5 9 4 4 8 12 6 5 7 3 4 2 4 6 8 5 21 4 8 4 24 5 6 7 14 13 30 8 4 2 3 8 1 2 9 4 8 12 6 9 16 6 4 9 6 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr19_55153160_55154300
seq2: B6Ng01-338F20.b_48_1179 (reverse)

seq1  GCCAC-AGAGACAGGCCCAGACTAGCAACATGAGCAAGTAGGAAAGGCAC  49
      ||||| ||||||||  |||||||||| |||||||| |||||  || ||||
seq2  GCCACAAGAGACAG--CCAGACTAGC-ACATGAGC-AGTAG--AAAGCAC  44

seq1  TGGTCCCCAGGAATGTTATGGGCAGATGTCACATCACAAAACTGAGCACA  99
      | ||||||||  ||||||||||||||||||||||||||||||||||||||
seq2  T-GTCCCCAG--ATGTTATGGGCAGATGTCACATCACAAAACTGAGCACA  91

seq1  AAGGGAAAGAGAAGCGCCCTGACAATAGTGCCAAGTATCCAAGTGTTCGT  149
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAGGGAAAGAGAAGCG-CCTGACAATAGTGCCAAGTATCCAAGTGTTCGT  140

seq1  GAGGATTCCCTTTGCTTTAAACACACGTCACAAGCGCTCATGTGAAGAGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTCCCTTTGCTTTAAACACACGTCACAAGCGCTCATGTGAAGAGC  190

seq1  ATGACAATGAATATGGTAGACATGGTCTATCCATGGCAGAACTACACAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAATGAATATGGTAGACATGGTCTATCCATGGCAGAACTACACAAG  240

seq1  CCTATTGTGGGAGGACAGAGGGGCTCTAATATTCAGAGCAAACTGCCTGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTGTGGGAGGACAGAGGGGCTCTAATATTCAGAGCAAACTGCCTGG  290

seq1  AAACTCTTTTCCAGCAGAACGCATACTGTGTCCTGAAATATGCCTTATTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTTTTCCAGCAGAACGCATACTGTGTCCTGAAATATGCCTTATTT  340

seq1  CCATTTCCTACAGCAACCAGAAACAGTATCCTTCCACTGTGTGTATTCAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCCTACAGCAACCAGAAACAGTATCCTTCCACTGTGTGTATTCAC  390

seq1  AGTGTGGCTCTTTCCCTCGCTGGACTGCTGGGCTCAGGGCAGGGTGCTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGCTCTTTCCCTCGCTGGACTGCTGGGCTCAGGGCAGGGTGCTGA  440

seq1  CCTTCTTTTTCTGTTCTTCTCCTAGCCTCAGCCTAACAAACAGGCTAACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTTTTCTGTTCTTCTCCTAGCCTCAGCCTAACAAACAGGCTAACA  490

seq1  AACACCCAGGCTTCTACCAAGGAACATGAGGGAGCATTAAGACGTACCTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCAGGCTTCTACCAAGGAACATGAGGGAGCATTAAGACGTACCTG  540

seq1  CCTGTGTCTGTAGAGGAGCAGACAGGCCACAATGTGGGTGGACATGATAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTCTGTAGAGGAGCAGACAGGCCACAATGTGGGTGGACATGATAG  590

seq1  CGCAGGACTTGCTGGCGGCTGGAAAGAAAGAGAGTGTTAGCTGGCCTTGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGGACTTGCTGGCGGCTGGAAAGAAAGAGAGTGTTAGCTGGCCTTGC  640

seq1  TCTAACTTACATGAGGCCTTGAAAGTGCTTAGCTTTAAACAGAAGCCTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACTTACATGAGGCCTTGAAAGTGCTTAGCTTTAAACAGAAGCCTGT  690

seq1  GGAGCTAACCACGTCTTCTACTATAGTTCCTGAAACTGCAGTTTACAGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTAACCACGTCTTCTACTATAGTTCCTGAAACTGCAGTTTACAGTG  740

seq1  GAAATGCAACTGGATTTGCCAGTGCCCTGGTAAAATGACTTCAGAGCAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCAACTGGATTTGCCAGTGCCCTGGTAAAATGACTTCAGAGCAAT  790

seq1  CACTTAACCACGAGGCCACATTCTAAGACAGATCCACCTTCAACCCAGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAACCACGAGGCCACATTCTAAGACAGATCCACCTTCAACCCAGAG  840

seq1  CAAGTAGGCTAGATCAGTCAACAAAATGCCTTTAATGAAATACCAAGACC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAGGCTAGATCAGTCAACAAAATGCCTTTAATGAAATACCAAGACC  890

seq1  CAAATTGCAGGCCCCCTCTGGAGCTCTAAAGGGGCCTGGACTAAGTGCCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGCAGGCCCCCTCTGGAGCTCTAAAGGGGCCTGGACTAAGTGCCA  940

seq1  TAGCATGCACGCCATGGACTGTAGTCTCCTGTCCTTGTGGGTACCCATGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATGCACGCCATGGACTGTAGTCTCCTGTCCTTGTGGGTACCCATGG  990

seq1  TGAAAAGCCAGCATACCCGAGCAGGGAAAGAGCAGGTTTGAAGTCACAGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGCCAGCATACCCGAGCAGGGAAAGAGCAGGTTTGAAGTCACAGC  1040

seq1  ATCAGGCTCCATCCTATCTCTACATTCATTAATCTCATGACCAGTGTCGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGCTCCATCCTATCTCTACATTCATTAATCTCATGACCAGTGTCGT  1090

seq1  GTTAAGGTGCTCAAGGGCACCACAGTACACAACTTGGAATTC  1141
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGGTGCTCAAGGGCACCACAGTACACAACTTGGAATTC  1132

seq1: chr19_54968753_54969916
seq2: B6Ng01-338F20.g_65_1204

seq1  GAATTCTTTCATCATCCTTGCCAGTGAAATGCAAGCAAAATCAAGACGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCATCATCCTTGCCAGTGAAATGCAAGCAAAATCAAGACGTA  50

seq1  TGCATAAACCAATGGTGTCTCTAGGTTCCAAGACAGTTCTCTGTTGTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAAACCAATGGTGTCTCTAGGTTCCAAGACAGTTCTCTGTTGTAGA  100

seq1  TCCCATAGGAGGAGACCCACAGAAGTCCAGGGTCAGGAAATACCAGATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATAGGAGGAGACCCACAGAAGTCCAGGGTCAGGAAATACCAGATGT  150

seq1  AGCCAGAAACTTTAAAGGAAAAAAAGATCTTGATTTATAAAAAGGGGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAAACTTTAAAGGAAAAAAAGATCTTGATTTATAAAAAGGGGTGA  200

seq1  TATGCAGACAGGGGAGTCATTTGTGTGCTTAGATAAGGTTCCTGAATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGACAGGGGAGTCATTTGTGTGCTTAGATAAGGTTCCTGAATATA  250

seq1  TCAACTCCAACCAGAATTTGAACATAAGTAAGTGCTACATGAAGAGTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTCCAACCAGAATTTGAACATAAGTAAGTGCTACATGAAGAGTCCA  300

seq1  GTAGAAACCTCTACATCAAACTTTTCCTTTAATAACCAGAAGGAAGAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAACCTCTACATCAAACTTTTCCTTTAATAACCAGAAGGAAGAGGA  350

seq1  ATAAACACACACACACACACACACACACACACTCAGCCTTGATAGAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACACACACACACACACACACACACACACTCAGCCTTGATAGAGTGA  400

seq1  ACAAGGATTTATCAATAATTTGGTTCCATGTAAGTTAAAGAAGGAATCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGATTTATCAATAATTTGGTTCCATGTAAGTTAAAGAAGGAATCAG  450

seq1  CATTTCAATGTCTACACATTTTTTGTTGCTTTTGTTGCGAGGGATGGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCAATGTCTACACATTTTTTGTTGCTTTTGTTGCGAGGGATGGAGT  500

seq1  CTCAATGGATTGCCTTGTATTTAGTGCAACTAAGCATCTTGATGAAGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATGGATTGCCTTGTATTTAGTGCAACTAAGCATCTTGATGAAGTTC  550

seq1  TTTTTGACTTACAAAGGTAGCCCAGGAGCCCTTGTTGAGATCAACACTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGACTTACAAAGGTAGCCCAGGAGCCCTTGTTGAGATCAACACTGG  600

seq1  AAATTAAACTGTTCTTCATGATGAAATAGTACAAATCTTGAAGATTCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAACTGTTCTTCATGATGAAATAGTACAAATCTTGAAGATTCTTT  650

seq1  TGTAAAAGAGCTAAAGAAAGACTCATATTTAAAAATAAAATAAAAACAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAGAGCTAAAGAAAGACTCATATTTAAAAATAAAATAAAAACAAG  700

seq1  GAAAGAAGATTTTCAGCTTCTCGGCCTGGGATAAGGTTCTCCTCAGAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAGATTTTCAGCTTCTCGGCCTGGGATAAGGTTCTCCTCAGAGGT  750

seq1  TATTTGCCAAGATCTAGGAAAACATCTACCTGCAACAGCTGGAGAAGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCCAAGATCTAGGAAAACATCTACCTGCAACAGCTGGAGAAGACA  800

seq1  TGCTCACATCTGGCAAGTAGAATAGGCATTCTGCCCACCATTCTTTGGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCACATCTGGCAAGTAGAATAGGCATTCTGCCCACCATTCTTTGGTT  850

seq1  CATGGGACTGTCCCACATTAAAACACTCACTCCTTCTGAAAGGCCAGTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGACTGTCCCACATTAAAACACTCACTCCTTCTGAAAGGCCAGTAG  900

seq1  TGCAGAGATGTAAAAACCTATCTCCAGAAGGACAGAAAGACCTGCTCAAT  950
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGATGT-AAAACCTATCTCCAGAAGGACAGAAAGACCTGCTCAAT  949

seq1  ATCCAGGAGATGGGGATTAAAGAAAAAAAAAAAGGAAGGTTCTAGTGAGC  1000
      |||||||||||||||||||||||||||||||   | | ||||||||||||
seq2  ATCCAGGAGATGGGGATTAAAGAAAAAAAAA---GGACGTTCTAGTGAGC  996

seq1  AAGAATGGACCCAGAAATAGAAATGATGTTTCCTCATGGA-TTTTATGTG  1049
       |||   |||||||||||||||||||||||  |||||||| |||||||||
seq2  -AGA--TGACCCAGAAATAGAAATGATGTT--CTCATGGATTTTTATGTG  1041

seq1  CTTAAAAGTGCTAAGCTCT-CTCTGTCCTCTTCCCCAAAGTGAATGTCTA  1098
      ||  |||||||||   ||| |||||| ||||  ||||||||| |||||||
seq2  CT--AAAGTGCTAGCTTCTCCTCTGT-CTCT--CCCAAAGTG-ATGTCTA  1085

seq1  TTGTCCAACTACCTTGTGCTGTGGTGTTCTAGATAATGGAGGAAGAGAAA  1148
       ||||  |||| ||||||||| ||   ||||||| ||||||||| |||||
seq2  -TGTC--ACTA-CTTGTGCTGGGG---TCTAGAT-ATGGAGGAA-AGAAA  1126

seq1  CTCCCTCCATGGAGGA  1164
      ||||   |||||||||
seq2  CTCC--TCATGGAGGA  1140

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BAC

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Alignment Information