BAC Information

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BAC

Clone NameB6Ng01-344D08
Chromosome19 (Build37)
Map Location 12,837,178 - 12,838,343
singlet/doubletsinglet
Overlap geneZfp91, Cntf
Upstream geneGif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1
Downstream geneLpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344D08.bB6Ng01-344D08.g
ACCGA126767GA126768
length1,1291,151
definitionB6Ng01-344D08.b B6Ng01-344D08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgact
ttctggagtccaccttcttgagttctttatatatattggatattattccc
ctacctgaattaggattgggaaagattctttcccattctgttggtggcct
ttttgtcttattaacagtgtcttttgcctaacagaagctttgtaatttta
tgaggtcgcatttgtcgattcttgatcttacagtacaagccattgctgtt
ccattgaggaatttttcctctgtgccctttttttctctttgaggcttttc
cccactttctattctttcactctctacacactttcactctctttacattt
tttttcactctctttacactttctacactttcactgtctctggttttatg
tggagttccttgatccacttagatttgaccttagtacaaggagataggaa
tggatcaattcgcattcttctacattatgaccaaaagttgtgccagcacc
atttgttgaaaatgctgtctttttttccactggatggttttagctccctt
gtcaaagatcaagtgaccataggtgtgtgggttcatctctgggtcttcaa
ttctattctattggtctacttgtctgtcgctatttcaataccatgcagtt
tttatcacaattgctctgtagtgcagctttaggtcaggcatggtgattcc
accagaggttcttttatcattgagaagagtttttgctatcctaggttttt
tgttaccccagatgaatttgcaaattgcgctttctaattcattgaagaat
tgagttggaattttgatggggattgcattgaatctgtagattgcttttgg
caagatagccatttttactatattgatctgtcaatccatgtgcatgggag
atctttccatcttctgagaccttctttgatttctttcttcagagacttga
agttcttagttagagtcacaccaaggtattttatattatttgtgactatt
gtgaaggtgttgtttccctaatttctttctcagctgtttatcctttgtgt
agataaaagcattgactttgtttggagtagttttatattccagctactca
ctgagctgtttatcaggttaggagttctc
gaattccttataggagagaatacaagatgagtcacacatccctacatcat
gcaacttatatggaagttagccctccctgactcatgattcattagtgagg
gagaatgtggttagacttgggtcctcaactcaacatctcttggggtttta
aagataaaaacaaatactaacaaactctggattcataatgcacagctctc
actgtaaatgaccttccccaggaatgtgtttcctagccttccacaccatg
tgtttctcacaagaacattacaagtagagctttactgtgtgtttaagaat
ctctggcattctcactggggacccatcctcccttcatgactaagcctgga
gaatgtaaagtgctagtgtcctgtgactctttaacctgagtagcattcta
cccctctgcccatgagcatctggccacagtacctatatgacagatttgtt
aacttgctgtaaactgagatcaacccaatatacaagtacaattagtcaac
attaagccaggctgttactgcatatcctcagccccaactatagaagtact
gcaggtctcatttttttttcttttctttctcaaatgtaatctgaagctat
gttaattgctgctctttgcccagtgtgggcaacaaatatttcctttaaca
tggtgggatgctgccgactcctgaggatgagtaacaagggcattcttttc
aatgctaggatagaatgcaagacatcttcctttccacaactaggatgtaa
ggctgtacagaatatacaaagcccatggcacactcactgcctctgcacag
cgatgctctttttatcagggtagtttgaatgaagatagtctaggacttcc
aatttgtttattcagtcttttcagaagtcaaccaaaactagtcacaatgt
ctcttctgcctgtaagactgttaaacacctgggaaaggttatttagtatc
aggaagggtaaagcactaaggtggaaggataatgccctaatatactttat
tataccaccaatacaacaaatcatgtacaccacatatgcaacagcagaat
aaccatgttatctttctgttcatacgtggtcaaccctacttgacgaatat
gctgtggttagttttcaattgattgctgaaaactagcctggggactactg
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12837178_12838343
seq2: B6Ng01-344D08.g_67_1217

seq1  GAATTCCTTATAGGAGAGAATACAAGATGAGTCACACATCCCTACATCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATAGGAGAGAATACAAGATGAGTCACACATCCCTACATCAT  50

seq1  GCAACTTATATGGAAGTTAGCCCTCCCTGACTCATGATTCATTAGTGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTATATGGAAGTTAGCCCTCCCTGACTCATGATTCATTAGTGAGG  100

seq1  GAGAATGTGGTTAGACTTGGGTCCTCAACTCAACATCTCTTGGGGTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGTGGTTAGACTTGGGTCCTCAACTCAACATCTCTTGGGGTTTTA  150

seq1  AAGATAAAAACAAATACTAACAAACTCTGGATTCATAATGCACAGCTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAAAACAAATACTAACAAACTCTGGATTCATAATGCACAGCTCTC  200

seq1  ACTGTAAATGACCTTCCCCAGGAATGTGTTTCCTAGCCTTCCACACCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAATGACCTTCCCCAGGAATGTGTTTCCTAGCCTTCCACACCATG  250

seq1  TGTTTCTCACAAGAACATTACAAGTAGAGCTTTACTGTGTGTTTAAGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCACAAGAACATTACAAGTAGAGCTTTACTGTGTGTTTAAGAAT  300

seq1  CTCTGGCATTCTCACTGGGGACCCATCCTCCCTTCATGACTAAGCCTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCATTCTCACTGGGGACCCATCCTCCCTTCATGACTAAGCCTGGA  350

seq1  GAATGTAAAGTGCTAGTGTCCTGTGACTCTTTAACCTGAGTAGCATTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTAAAGTGCTAGTGTCCTGTGACTCTTTAACCTGAGTAGCATTCTA  400

seq1  CCCCTCTGCCCATGAGCATCTGGCCACAGTACCTATATGACAGATTTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTGCCCATGAGCATCTGGCCACAGTACCTATATGACAGATTTGTT  450

seq1  AACTTGCTGTAAACTGAGATCAACCCAATATACAAGTACAATTAGTCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGCTGTAAACTGAGATCAACCCAATATACAAGTACAATTAGTCAAC  500

seq1  ATTAAGCCAGGCTGTTACTGCATATCCTCAGCCCCAACTATAGAAGTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGCCAGGCTGTTACTGCATATCCTCAGCCCCAACTATAGAAGTACT  550

seq1  GCAGGTCTCATTTTTTTTTCTTTTCTTTCTCAAATGTAATCTGAAGCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTCTCATTTTTTTTTCTTTTCTTTCTCAAATGTAATCTGAAGCTAT  600

seq1  GTTAATTGCTGCTCTTTGCCCAGTGTGGGCAACAAATATTTCCTTTAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTGCTGCTCTTTGCCCAGTGTGGGCAACAAATATTTCCTTTAACA  650

seq1  TGGTGGGATGCTGCCGACTCCTGAGGATGAGTAACAAGGGCATTCTTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGGATGCTGCCGACTCCTGAGGATGAGTAACAAGGGCATTCTTTTC  700

seq1  AATGCTAGGATAGAATGCAAGACATCTTCCTTTCCACAACTAGGATGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAGGATAGAATGCAAGACATCTTCCTTTCCACAACTAGGATGTAA  750

seq1  GGCTGTACAGAATATACAAAGCCCATGGCACACTCACTGCCTCTGCACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTACAGAATATACAAAGCCCATGGCACACTCACTGCCTCTGCACAG  800

seq1  CGATGCTCTTTTTATCAGGGTAGTTTGAATGAAGATAGTCTAGGACTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGCTCTTTTTATCAGGGTAGTTTGAATGAAGATAGTCTAGGACTTCC  850

seq1  AATTTGTTTATTCAGTCTTTTCAGAAGTCAACCAAAACTAGTCACAATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTTTATTCAGTCTTTTCAGAAGTCAACCAAAACTAGTCACAATGT  900

seq1  CTCTTCTGCCTGTAAGACTGTTAAACACCT-GGAAAGGTTATTTAGTATC  949
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTCTTCTGCCTGTAAGACTGTTAAACACCTGGGAAAGGTTATTTAGTATC  950

seq1  AGGAAGGGTAAAGCACTAAGGTGGAAGGATAATGCCCTAATTATACTTTA  999
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGGAAGGGTAAAGCACTAAGGTGGAAGGATAATGCCCTAA-TATACTTTA  999

seq1  TTATACCACCAATACAAACAAAATCATGTACA-CACATATGC-ACAGCCA  1047
      |||||||||||||||||   |||||||||||| ||||||||| |||| ||
seq2  TTATACCACCAATACAA--CAAATCATGTACACCACATATGCAACAG-CA  1046

seq1  GAATAACCATGTTTATC-TTCTGTTCATACGTGGGTCAACCCTACTTGAC  1096
      ||||||||||| ||||| |||||||||||||| |||||||||||||||||
seq2  GAATAACCATG-TTATCTTTCTGTTCATACGT-GGTCAACCCTACTTGAC  1094

seq1  GAAATATGCCTGTGGTCTAAGGTTTTCCAAAATTGA-TGCTGAGAAAACT  1145
      | |||||| ||||||| ||  ||||||   |||||| ||||  |||||||
seq2  G-AATATG-CTGTGGT-TA--GTTTTC---AATTGATTGCT--GAAAACT  1134

seq1  AGGCCCCTGGGGAACTACTGA  1166
      ||   ||||||| ||||||||
seq2  AG---CCTGGGG-ACTACTGA  1151