BAC Information

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BAC

Clone NameB6Ng01-346B07
Chromosome19 (Build37)
Map Location 12,611,762 - 12,612,943
singlet/doubletsinglet
Overlap geneEG625046
Upstream geneMs4a4d, LOC100040454, Ms4a6d, Ms4a2, Ms4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4
Downstream gene4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346B07.bB6Ng01-346B07.g
ACCGA128085GA128086
length1,2651,163
definitionB6Ng01-346B07.b B6Ng01-346B07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaatgatatttaaaaagaacatagacaagaaattccaagaaaa
ccataatgggaatggaaaactcagcaaggatagtcattgtgagaaagaac
caaacagaaaaatcttagaaatgaatagctcagcaaattaaactttaaaa
acacaactgagaattttttttaaaaaatattatattatatttatttgttt
tacttatccactttacatcttgctcactgcccctctcctcgtcacacctc
ccacaatctttccccactccttctccatttctcctctgagcaatggatat
cccccccaccctggcagttctgcctctgtgaggttaggtgcatcctttcc
cactgaggtcagacaaggccagcccagatagaagaacacatcccacaggc
aggcaacagcttttgggatagctaccccctgccctccacttcagttgttc
aagacccacataaagaccaagctgcgcatctactacttatgtgcaggaag
gcctaggtcaagctatgtgtgttctttggttgactatgttgttcttttgg
ttcagactctgaaagccccaagggttcaggttagttgattctgttggtct
tcctgtgaaacaactgagaattttaacaagagacaagatgaagaaaagaa
ataatttgttttgtgttgggtagctagtactgagtatcaggaatgctctg
atatattgttaatatatccagtcagatttcattgaagaaaatgggtattt
tcttttccagtgggtatcagttgcagactgattatgggttaggggtggga
actagtgtcctcttcccttcagaatgctgggatgtcatgtggcttgaaca
tatgcagtcctttcgcatgctaccatagtcactgttgctttatatgtaca
tcagtcctgttgtgtctgaaagtcatccatcacctttggctctgttatct
ttctgcctcctcttctatttagatctctgagcactggggagaggcaggta
atgatgaacatcccatttaggtctaagtgcctcaaagtctttcacactct
ctgcattgttcaattgcaggtttctgtaaattgccatttactacaagaag
aacagtttgattgagggcctggatcaggcccttaatgtatgctatcagga
atcatttaatgtattgttccttaagccaaaataatatatcattctctata
ccagtaaccatatctagactccaggtttctggctactattgtacatgagt
ccgacggatagtgga
gaattcaggtcattccaggggtaattgattcaaattgtatgggagagatt
aaggttatgctttaccccccccccccacacacacacacacactaaaactg
tacatctgggacaaagagtttgggttgcacaattgcttttgcttccttaa
tcttatcctaattatatggcactctaaatacaggaagataaaaactcagg
tttcatgaaaatttaaaggtacagggtaaagctgctgaaagtcttataga
tacaagagctgatatatcttgtatcactggaaaaggctggccctcctctt
agcaatctcaaagtaccccatcaactttcgttcacttaagacaaactgcc
aatgtggcaaaaaaaatgctgagatttttaacaatgccatatgaagagtc
ttctggttctttttgtccctatgtgattctatctttacctttcatattat
agggaagaaacattttggaatagatgggggttcctttaataattccaaat
tattaagttgcctctcaagtgatacaaatgaaacctgttcccagtatgag
actaagaaaaaaatcgtcaaggtattacagaacccatacaacctaaatga
aataacagagagggattaggttttgatcaaagttttttcctaggatccac
tgttgaactggctgctgaccccatccattatttagaaatctaagcctcct
ctttgagtcgacaatggctcctggctatagaaaagatacaagcagttaca
gctctggttaatgaacaattacaactggaacatatagaactttacaacag
tccctggaatatccatatatttgttattttaaaaaaatcaggaaagtgaa
aggctcctataagactatccttaagaattaaggctggataagctcataac
attaaataattttcaaaacttttagggatataaactttcacgagacaaaa
tagctctacataggtacaaaagaaatttcaggccacattaaagcaaatta
attacacacatctgcatttgtgtgtatccactcctcatagtcccactaga
tgctctagtaaacatgctacttgatagatttatttaccctcttttgtact
caccctcttgatcttatagaaattcctttaacgtacgacacctattatgg
gaaagagaatatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12611762_12612943
seq2: B6Ng01-346B07.g_69_1231

seq1  GAATTCAGGTCATTCCAGGGGTAATTGATTCAAATTGTATGGGAGAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCATTCCAGGGGTAATTGATTCAAATTGTATGGGAGAGATT  50

seq1  AAGGTTATGCTTTACCCCCCCCCCCCCACACACACACACACACTAAAACT  100
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAGGTTATGCTTTA-CCCCCCCCCCCCACACACACACACACACTAAAACT  99

seq1  GTACATCTGGGACAAAGAGTTTGGGTTGCACAATTGCTTTTGCTTCCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATCTGGGACAAAGAGTTTGGGTTGCACAATTGCTTTTGCTTCCTTA  149

seq1  ATCTTATCCTAATTATATGGCACTCTAAATACAGGAAGATAAAAACTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATCCTAATTATATGGCACTCTAAATACAGGAAGATAAAAACTCAG  199

seq1  GTTTCATGAAAATTTAAAGGTACAGGGTAAAGCTGCTGAAAGTCTTATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATGAAAATTTAAAGGTACAGGGTAAAGCTGCTGAAAGTCTTATAG  249

seq1  ATACAAGAGCTGATATATCTTGTATCACTGGAAAAGGCTGGCCCTCCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGAGCTGATATATCTTGTATCACTGGAAAAGGCTGGCCCTCCTCT  299

seq1  TAGCAATCTCAAAGTACCCCATCAACTTTCGTTCACTTAAGACAAACTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATCTCAAAGTACCCCATCAACTTTCGTTCACTTAAGACAAACTGC  349

seq1  CAATGTGGCAAAAAAAATGCTGAGATTTTTAACAATGCCATATGAAGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGGCAAAAAAAATGCTGAGATTTTTAACAATGCCATATGAAGAGT  399

seq1  CTTCTGGTTCTTTTTGTCCCTATGTGATTCTATCTTTACCTTTCATATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGTTCTTTTTGTCCCTATGTGATTCTATCTTTACCTTTCATATTA  449

seq1  TAGGGAAGAAACATTTTGGAATAGATGGGGGTTCCTTTAATAATTCCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAAGAAACATTTTGGAATAGATGGGGGTTCCTTTAATAATTCCAAA  499

seq1  TTATTAAGTTGCCTCTCAAGTGATACAAATGAAACCTGTTCCCAGTATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAGTTGCCTCTCAAGTGATACAAATGAAACCTGTTCCCAGTATGA  549

seq1  GACTAAGAAAAAAATCGTCAAGGTATTACAGAACCCATACAACCTAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAGAAAAAAATCGTCAAGGTATTACAGAACCCATACAACCTAAATG  599

seq1  AAATAACAGAGAGGGATTAGGTTTTGATCAAAGTTTTTTCCTAGGATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACAGAGAGGGATTAGGTTTTGATCAAAGTTTTTTCCTAGGATCCA  649

seq1  CTGTTGAACTGGCTGCTGACCCCATCCATTATTTAGAAATCTAAGCCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGAACTGGCTGCTGACCCCATCCATTATTTAGAAATCTAAGCCTCC  699

seq1  TCTTTGAGTCGACAATGGCTCCTGGCTATAGAAAAGATACAAGCAGTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAGTCGACAATGGCTCCTGGCTATAGAAAAGATACAAGCAGTTAC  749

seq1  AGCTCTGGTTAATGAACAATTACAACTGGAACATATAGAACTTTACAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGGTTAATGAACAATTACAACTGGAACATATAGAACTTTACAACA  799

seq1  GTCCCTGGAATATCCATATATTTGTTATTTTAAAAAAATCAGGAAAGTG-  849
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTCCCTGGAATATCCATATATTTGTTATTTTAAAAAAATCAGGAAAGTGA  849

seq1  AAGGCTCCTATAAGACTATCCTTAAGAATTAAGGCTGGATAAGCTCATAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCCTATAAGACTATCCTTAAGAATTAAGGCTGGATAAGCTCATAA  899

seq1  CATTAAATAATTTTCAAAAACTTTTAGGGATATAAACTTTCACGAGACAA  949
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CATTAAATAATTTTC-AAAACTTTTAGGGATATAAACTTTCACGAGACAA  948

seq1  AATAAGCTCTACAATAGGTACAAAAAGAAATTTCAAGCCAACAATTAAAG  999
      ||| |||||||| |||||||| ||||||||||||| ||||   |||||||
seq2  AAT-AGCTCTAC-ATAGGTAC-AAAAGAAATTTCAGGCCA--CATTAAAG  993

seq1  CAAATTAATTACACACAATCTTGCAATTTGGTTGTTGTATCCACTCCTCA  1049
      |||||||||||||||| ||| ||| |||||  || |||||||||||||||
seq2  CAAATTAATTACACAC-ATC-TGC-ATTTG--TG-TGTATCCACTCCTCA  1037

seq1  TAGTCCCACTAGATGCCTCTAGTAAAACATGCTACTTGAATAGATTTATT  1099
      ||||||||||||||| ||||||| |||||||||||||| |||||||||||
seq2  TAGTCCCACTAGATG-CTCTAGT-AAACATGCTACTTG-ATAGATTTATT  1084

seq1  TACCCTC-TCTGTACTCACCTCTTTGATTCTTATAGATATTCCATATAAC  1148
      ||||||| | ||||||||||   |||| ||||||||| ||||| | ||||
seq2  TACCCTCTTTTGTACTCACCCTCTTGA-TCTTATAGAAATTCC-TTTAAC  1132

seq1  CCATAAGGACAATCTATTAT-GGAAAGAGATTATC  1182
           | ||| | ||||||| ||||||||| ||||
seq2  ---GTACGAC-ACCTATTATGGGAAAGAGAATATC  1163