Query= MSMg01no045_m12.b1 MSMg01no045_m12.b1 CHROMAT_FILE:
MSMg01no045_m12.b1 PHD_FILE: MSMg01no045_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:49 2005
(218 letters)
>mm_chr19_18032268_18032885
Length = 618
Score = 344 bits (178), Expect = 2e-99
Identities = 208/218 (95%)
Strand = Plus / Plus
Query: 1 gatcgtctagaggacataagctctgactaacccagagtagagaccactctagtggtattt 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 gatcgtctagaggacataagctctgacaaacccagagtagagaccactctagtggtattt 260
Query: 61 gagagcaggtgagatgtcacagattgagcagaggccagtcctagaagccaaacattctgc 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 261 gagagcaggtgagatgtcacagattgagcagaggccagtcctaggagccaaacatcctgc 320
Query: 121 agattcagcagagtttgttacttggtggccgatggcttggcgtcaacctagttacatcat 180
|||| |||| |||||||| |||||||||| |||||||||||||||| |||||||||||||
Sbjct: 321 agatccagcggagtttgtcacttggtggctgatggcttggcgtcaatctagttacatcat 380
Query: 181 tttgttagacccactttttacagctctcagatggtctt 218
||||||||||||| |||||||||||||||||| |||||
Sbjct: 381 tttgttagacccaatttttacagctctcagatagtctt 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 218
Length of database: 618
Length adjustment: 9
Effective length of query: 209
Effective length of database: 609
Effective search space: 127281
Effective search space used: 127281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no045_m12.g1 MSMg01no045_m12.g1 CHROMAT_FILE:
MSMg01no045_m12.g1 PHD_FILE: MSMg01no045_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:49 2005
(165 letters)
>mm_chr19_18204840_18205403
Length = 564
Score = 265 bits (137), Expect = 1e-75
Identities = 158/167 (94%), Gaps = 5/167 (2%)
Strand = Plus / Minus
Query: 1 agttagaagaaatattttttttt--aaattcttttgaaactctcttgagagacaacggag 58
|||||||||||||| |||||| ||||||||||||||||| |||||||||||| ||||
Sbjct: 364 agttagaagaaata---ttttttaaaaattcttttgaaactcacttgagagacaatggag 308
Query: 59 gcatagtttcagatgagtgtccaagttacatataagctagttgagctttttaacaccgaa 118
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 307 gcatagtttcagatgagtgtccaaattacatataagctagttgagctttttaacactgaa 248
Query: 119 acctatcaagatctcttctagggaatggccttggatggaaatcaaca 165
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 acctatcaagatctcttctagggaatggccttggatggaaatcaaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 165
Length of database: 564
Length adjustment: 8
Effective length of query: 157
Effective length of database: 556
Effective search space: 87292
Effective search space used: 87292
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
