Query= MSMg01no052_g08.b1 MSMg01no052_g08.b1 CHROMAT_FILE:
MSMg01no052_g08.b1 PHD_FILE: MSMg01no052_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:00 2005
(619 letters)
>mm_chr19_21783338_21784356
Length = 1019
Score = 988 bits (511), Expect = 0.0
Identities = 591/619 (95%), Gaps = 7/619 (1%)
Strand = Plus / Minus
Query: 5 gaattctctatagagctc-cttaaaacaagtacataaaattgagtgtggtggctctaatt 63
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 gaattctctatagagatcacttaaaacaagtacataaaattgagtgtggtggctctaatt 893
Query: 64 ccagcatctcaggggcagaggcaggaagatcacaagtttaagaggccaacgtggtctgca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 892 ccagcatctcaggggcagaggcaggaagatcacaagtttaagaggccaacgtggtctaca 833
Query: 124 tacccagattctatctcactgtgcctctcaaggagtaaattagtatgtgacttcttatgc 183
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 832 tacccagattctatctcactgtgcctcccaaggagtaaatttgtatgtgacttcttatgc 773
Query: 184 cagactttaaggtatc--taattgagaatgtgctaacccattatccagatgctctgtctg 241
|||||||||||||||| || |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 772 cagactttaaggtatccata--tgagaatgcactaacccattatccagaggctctctctg 715
Query: 242 acgtttggtgtcaatataattaaataacaacttctacctctgtctctgtgttcaccttta 301
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 714 acgtttggtgtcaatataattaaataacagcgtctacctctgtctctgtgttcaccttta 655
Query: 302 caataatttcccccatgctttgaggtcctcataagcttttatctgctttgatgtcaggtg 361
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 654 caataatttcccccatgctttggggtcctcataagcttttatctgctttgatgtcaggtg 595
Query: 362 gcccgaagaatgctaagcctgtggggttttcttatcgttacttacctccttacccaaaca 421
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 594 gcccgaagaatgctaagcctgtggggttttcttatcgttgcttacctccttacccaaaca 535
Query: 422 aagagactgttctttcctatgcatgtcctcgactgtaacatatatacatgtgtatgtaaa 481
|||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 534 aagagactattctttcgtatgcatgtccttgactgtaacatatatacatgtgtatgtaaa 475
Query: 482 tacttataaac-taggatcagaaagtagaaaggaggttaagaaggagtacaaaggagatt 540
||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tacgtataaacat-ggatcagaaagtagaaaggaggttaagaaggagtacaaaggagatt 416
Query: 541 caaggaagtgagagaggcaaatggtcacatattacttgaaagcctaaaggagacggtggg 600
||| |||||| |||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 415 caaagaagtgggagaggcaaatggtcacatattacttgaaaacctaaaggagactgtggg 356
Query: 601 gaatgcagaggacagtgag 619
||||| |||||||||||||
Sbjct: 355 gaatggagaggacagtgag 337
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_g08.g1 MSMg01no052_g08.g1 CHROMAT_FILE:
MSMg01no052_g08.g1 PHD_FILE: MSMg01no052_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:00 2005
(538 letters)
>mm_chr19_21644966_21645905
Length = 940
Score = 1017 bits (526), Expect = 0.0
Identities = 536/540 (99%), Gaps = 2/540 (0%)
Strand = Plus / Plus
Query: 1 atcagatggggtttagacaggctagagatagacatgaggtattccctattgaccttgggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcagatggggtttagacaggctagagatagacatgaggtattccctattgaccttgggc 260
Query: 61 ataaggcatttcacattgagaggaactgggtgaaggaagccggttgagccattccagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataaggcatttcacattgagaggaactgggtgaaggaagccggttgagccattccagaaa 320
Query: 121 tgcctagcgcatgcagactacgggctgaattagtccatgtattcgtttgaaagtattttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcctagcgcatgcagactacgggctgaattagtccatgtattcgtttgaaagtattttt 380
Query: 181 cacacctctcaccaagaacagtgtgctaaggcaggatcaaagggaatcaatggtggctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacacctctcaccaagaacagtgtgctaaggcaggatcaaagggaatcaatggtggctcc 440
Query: 241 tgccctgcaggggctgcttccagcaaagagcacagttgtcagaggcctataccggctcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgccctgcaggggctgcttccagcaaagagcacagttgtcagaggcctataccggctcct 500
Query: 301 gctgttgccctggcagcataaacacagaagaaagcaagcagcatttctccacgtgggagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctgttgccctggcagcataaacacagaagaaagcaagcagcatttctccacgtgggagg 560
Query: 361 caagtaagagctgaatatgagaacaggatcctgttgcagaggtttgagacaaggctcaat 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caagtaagagctgaatacgagaacaggatcctgttgcagaggtttgagacaaggctcaat 620
Query: 421 ggaggtcccttgcaagattttgaatacggaagtgaaccaaataccagaaatggaaacgat 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 621 ggaggtcccttgcaagattttgaatacggaagtgaaccaagtaccagaaatggaaacgat 680
Query: 481 aaacagatcagcaaatactcattt--tttttaatacacccatactcacccatcttcaaac 538
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 aaacagatcagcaaatactcatttattttttaatacacccatactcacccatcttcaaac 740
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 940
Length adjustment: 10
Effective length of query: 528
Effective length of database: 930
Effective search space: 491040
Effective search space used: 491040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
