ATCATAATTTGCGGCGCTATACGACTCCTATAGTCAGAAATCCGCGGAAT
TCAGCTTATTGTCCGATACCAAAGTTGTTCACACAAATGCAGTACTCATG
GTACCGGCTCCTGACGTTAATATGCAGAATTTTACACCTTCCAAGATAGA
TTGTTTTGGCTATGTCATCTTAGATTTTGACTAATTTATCCTAGACTTTG
GCTATGATGTCATTTTAGACTTTGACTATGTCACCTTGGAATTTGGCTAT
AATGTCATCTTAGACTTTGGCTATGCCATCTTGAAATCTGGCTATGACAT
CATCTTAGACTTTGCCTTTGTCATCTTAGCACCTGCTCCAAGAAAGATTT
CTAGGGGACATATCTCTGTGAGGGAAAAGTGAGGAGAAATCATGTAGTTG
TCATCAGTCCATCGAAGAAACCTGTATCTTCACTTTAAAACGTCACCTCT
TAAAGACAAAAAGAAGCAAAACCACAGACCATCTTCTGCTGTACTTGTTT
CATGGACTGTAGGGTTGTTCTCTGGGAATGGGGATTGAGGGGAGACTTGC
TTGCTTTGTGCATAAACAAGAGGTTTGCACACCCTATAGACTCCCACAAG
AAGAGAGAAATCCAAATCTACTTCTTTCTTCATCCTTCTTTTTCGCTCTT
CTATGTGGGCAGCATCTACTATGGGTG

ACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAG
AAGCACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAATT
CAAAAAAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCA
AAAATTCAGGTGACAGCAGATGCTGGCCTGGATGTGGAGAAAGAGGAACA
CTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATC
AGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAG
CAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAGAAG
GACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATTGCCAGAAG
CTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGT
GGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTT
ATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGA
GGTAACACATTCACAAAGAAACTCACACAATATGTATTCACTGATAAGTG
GATATTAGCCCCAAACCTAGGATACCCAAGATATAAGN

Query= MSMg01no052_j02.b1 MSMg01no052_j02.b1 CHROMAT_FILE:
MSMg01no052_j02.b1 PHD_FILE: MSMg01no052_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:13 2005
         (595 letters)



>mm_chr19_25858465_25859460
          Length = 996

 Score = 1116 bits (577), Expect = 0.0
 Identities = 589/595 (98%), Gaps = 5/595 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcagcttattgtcc---gataccaaagttgttcacacaaatgcagtactcatggt 60
           |||||||||||||||||     ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagcttattgt--atagataccaaagttgttcacacaaatgcagtactcatggt 261

                                                                       
Query: 61  accggctcctgacgttaatatgcagaattttacaccttccaagatagattgttttggcta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 accggctcctgacgttaatatgcagaattttacaccttccaagatagattgttttggcta 321

                                                                       
Query: 121 tgtcatcttagattttgactaatttatcctagactttggctatgatgtcattttagactt 180
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 322 tgtcatcttagattttgactaatttatcctagactttggctaggatgtcattttagactt 381

                                                                       
Query: 181 tgactatgtcaccttggaatttggctataatgtcatcttagactttggctatgccatctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tgactatgtcaccttggaatttggctataatgtcatcttagactttggctatgccatctt 441

                                                                       
Query: 241 gaaatctggctatgacatcatcttagactttgcctttgtcatcttagcacctgctccaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gaaatctggctatgacatcatcttagactttgcctttgtcatcttagcacctgctccaag 501

                                                                       
Query: 301 aaagatttctaggggacatatctctgtgagggaaaagtgaggagaaatcatgtagttgtc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aaagatttctaggggacatatctctgtgagggaaaagtgaggagaaatcatgtagttgtc 561

                                                                       
Query: 361 atcagtccatcgaagaaacctgtatcttcactttaaaacgtcacctcttaaagacaaaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 atcagtccatcgaagaaacctgtatcttcactttaaaacgtcacctcttaaagacaaaaa 621

                                                                       
Query: 421 gaagcaaaaccacagaccatcttctgctgtacttgtttcatggactgtagggttgttctc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gaagcaaaaccacagaccatcttctgctgtacttgtttcatggactgtagggttgttctc 681

                                                                       
Query: 481 tgggaatggggattgaggggagacttgcttgctttgtgcataaacaagaggtttgcacac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tgggaatggggattgaggggagacttgcttgctttgtgcataaacaagaggtttgcacac 741

                                                                  
Query: 541 cctatagactcccacaagaagagagaaatccaaatctacttctttcttcatcctt 595
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 cctatagactcccacaagaagagagaaatccaaatctacttctttcttcatcctt 796


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 996
Length adjustment: 10
Effective length of query: 585
Effective length of database: 986
Effective search space:   576810
Effective search space used:   576810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)