MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-053M15
Chromosome	19 (Build37)
Map Location	43,759,542 - 43,759,781
singlet/doublet	singlet
Overlap gene	none
Upstream gene	4833409A17Rik, Hps1, LOC545291, EG627624, Cnnm1, Got1, Nkx2-3, LOC100042700, LOC100043245, Slc25a28
Downstream gene	Entpd7, Cox15, Cutc, Abcc2, Dnmbp, LOC668408, Cpn1, Cyp2c44, Erlin1, Chuk, Cwf19l1, Bloc1s2, Pkd2l1, Scd3, LOC629152, Scd2, Scd4, Scd1, Wnt8b, Sec31b, Ndufb8, Hif1an
Link	Open Mouse BAC browser

Click to get alignment info.

name	4833409A17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74580 MGI:1921830
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:192236 MGI:2177763
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545291 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545291
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627624 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627624 MGI:3647201
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 68 ESTs, 3 Proteins

name	Cnnm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83674 MGI:1891366
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Got1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14718 MGI:95791
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nkx2-3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18089 MGI:97348
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042700 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042700
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100043245 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043245
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Slc25a28 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:246696 MGI:2180509
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Entpd7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93685 MGI:2135885
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cox15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226139 MGI:1920112
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cutc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66388 MGI:1913638
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abcc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12780 MGI:1352447
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnmbp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71972 MGI:1917352
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668408 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668408
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Cpn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93721 MGI:2135874
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp2c44 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226143 MGI:1888897
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Erlin1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226144 MGI:2387613
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chuk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12675 MGI:99484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cwf19l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72502 MGI:1919752
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bloc1s2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73689 MGI:1920939
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 52 ESTs, 5 Proteins

name	Pkd2l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329064 MGI:1352448
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30049 MGI:1353437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC629152 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629152
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Scd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20250 MGI:98240
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329065 MGI:2670997
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20249 MGI:98239
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wnt8b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22423 MGI:109485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sec31b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240667 MGI:2685187
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ndufb8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67264 MGI:1914514
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hif1an (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319594 MGI:2442345
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4833409A17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125858597 GeneID:74580 MGI:1921830
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4833409A17 gene transcript_id : NM_029011.2

name	Hps1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126722683 GeneID:192236 MGI:2177763
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Hermansky-Pudlak syndrome 1 homolog (human) transcript_id : NM_019424.2

name	LOC545291 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:124486930 GeneID:545291
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : similar to Heparanase-2 (Hpa2) transcript_id : NM_001081257.1

name	EG627624 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270554 GeneID:627624 MGI:3647201
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 68 ESTs, 3 Proteins product : predicted gene, EG627624 transcript_id : XM_894499.3

name	Cnnm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13878234 GeneID:83674 MGI:1891366
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin M1 transcript_id : NM_031396.1

name	Got1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754033 GeneID:14718 MGI:95791
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate oxaloacetate transaminase 1, soluble transcript_id : NM_010324.1

name	Nkx2-3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:49274620 GeneID:18089 MGI:97348
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NK2 transcription factor related, locus 3 (Drosophila) transcript_id : NM_008699.2

name	LOC100043245 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270555 GeneID:100043245
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043245 transcript_id : XM_001480053.1

name	Slc25a28 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21553114 GeneID:246696 MGI:2180509
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25, member 28 transcript_id : NM_145156.1

name	Entpd7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380877 GeneID:93685 MGI:2135885
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ectonucleoside triphosphate diphosphohydrolase 7 transcript_id : NM_053103.4

name	Cox15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384028 GeneID:226139 MGI:1920112
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : COX15 homolog, cytochrome c oxidase assembly protein (yeast) transcript_id : NM_144874.3

name	Cutc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142379763 GeneID:66388 MGI:1913638
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cutC copper transporter homolog (E.coli) transcript_id : NM_025530.2

name	Abcc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116063565 GeneID:12780 MGI:1352447
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family C (CFTR/MRP), member 2 transcript_id : NM_013806.2

name	Dnmbp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130402 GeneID:71972 MGI:1917352
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynamin binding protein transcript_id : NM_028029.2

name	LOC668408 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94406015 GeneID:668408
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : similar to sterile alpha motif domain containing 1 transcript_id : XM_001001317.1

name	Cpn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13507643 GeneID:93721 MGI:2135874
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carboxypeptidase N, polypeptide 1 transcript_id : NM_030703.1

name	Cyp2c44 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:48374084 GeneID:226143 MGI:1888897
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 2, subfamily c, polypeptide 44 transcript_id : NM_001001446.2

name	Erlin1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981798 GeneID:226144 MGI:2387613
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ER lipid raft associated 1 transcript_id : NM_145502.2

name	Chuk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680941 GeneID:12675 MGI:99484
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : conserved helix-loop-helix ubiquitous kinase transcript_id : NM_007700.1

name	Cwf19l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487290 GeneID:72502 MGI:1919752
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CWF19-like 1, cell cycle control (S. pombe) transcript_id : NM_001081077.1

name	Bloc1s2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94405946 GeneID:73689 MGI:1920939
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 52 ESTs, 5 Proteins product : biogenesis of lysosome-related organelles complex-1, subunit 2, transcript variant 1 transcript_id : XM_193940.6

name	Bloc1s2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94405948 GeneID:73689 MGI:1920939
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 27 ESTs, 3 Proteins product : biogenesis of lysosome-related organelles complex-1, subunit 2, transcript variant 7 transcript_id : XM_901658.2

name	Pkd2l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340854 GeneID:329064 MGI:1352448
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polycystic kidney disease 2-like 1 transcript_id : NM_181422.2

name	Scd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86439985 GeneID:30049 MGI:1353437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stearoyl-coenzyme A desaturase 3 transcript_id : NM_024450.2

name	Scd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677862 GeneID:20250 MGI:98240
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stearoyl-Coenzyme A desaturase 2 transcript_id : NM_009128.1

name	Scd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130727 GeneID:329065 MGI:2670997
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stearoyl-coenzyme A desaturase 4 transcript_id : NM_183216.3

name	Scd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130513 GeneID:20249 MGI:98239
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stearoyl-Coenzyme A desaturase 1 transcript_id : NM_009127.3

name	Wnt8b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142389070 GeneID:22423 MGI:109485
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : wingless related MMTV integration site 8b transcript_id : NM_011720.2

name	Sec31b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133504850 GeneID:240667 MGI:2685187
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Sec31 homolog B (S. cerevisiae) transcript_id : NM_001033343.1

name	Ndufb8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892869 GeneID:67264 MGI:1914514
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 transcript_id : NM_026061.2

name	Hif1an (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70909331 GeneID:319594 MGI:2442345
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypoxia-inducible factor 1, alpha subunit inhibitor transcript_id : NM_176958.3

name	4833409A17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125858598 GeneID:74580 MGI:1921830
definition	GO_function : GO:0050660 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA] GO_process : GO:0016117 - carotenoid biosynthesis [Evidence IEA] codon_start : 1 product : hypothetical protein LOC74580 protein_id : NP_083287.2

name	Hps1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506573 GeneID:192236 MGI:2177763
definition	GO_component : GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence ISS] GO_process : GO:0030318 - melanocyte differentiation [Evidence IMP]; GO:0006996 - organelle organization and biogenesis [Evidence IMP] codon_start : 1 note : Hermansky-Pudlak syndrome protein homolog product : pale ear protein_id : NP_062297.1

name	LOC545291 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:124486931 GeneID:545291
definition	codon_start : 1 product : similar to Heparanase-2 (Hpa2) protein_id : NP_001074726.1

name	EG627624 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82998566 GeneID:627624 MGI:3647201
definition	codon_start : 1 product : similar to leucine zipper transcription factor-like 1 protein_id : XP_899592.1

name	Cnnm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13878235 GeneID:83674 MGI:1891366
definition	GO_component : GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : ancient conserved domain protein 1; cyclin-like protein 1 product : cyclin M1 protein_id : NP_113573.1

name	Got1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754034 CCDS:CCDS29832.1 GeneID:14718 MGI:95791
definition	GO_function : GO:0004069 - aspartate transaminase activity [Evidence IDA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016769 - transferase activity, transferring nitrogenous groups [Evidence IEA] GO_process : GO:0006520 - amino acid metabolism [Evidence IEA]; GO:0009058 - biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : cytosolic aspartate aminotransferase product : glutamate oxaloacetate transaminase 1, soluble protein_id : NP_034454.1

name	Nkx2-3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46849702 CCDS:CCDS29833.1 GeneID:18089 MGI:97348
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0030183 - B cell differentiation [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0006955 - immune response [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : Drosophila NK2 transcription factor related, locus 3 product : NK2 transcription factor related, locus 3 protein_id : NP_032725.1

name	LOC100043245 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270556 GeneID:100043245
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480103.1

name	Slc25a28 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21553115 CCDS:CCDS29834.1 GeneID:246696 MGI:2180509
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006826 - iron ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : putative mitochondrial solute carrier product : solute carrier family 25, member 28 protein_id : NP_660138.1

name	Entpd7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82617566 CCDS:CCDS29835.1 GeneID:93685 MGI:2135885
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0017110 - nucleoside-diphosphatase activity [Evidence ISS]; GO:0017111 - nucleoside-triphosphatase activity [Evidence ISS] GO_process : GO:0009191 - ribonucleoside diphosphate catabolism [Evidence ISS]; GO:0009203 - ribonucleoside triphosphate catabolism [Evidence ISS] codon_start : 1 note : lysosomal apyrase-like 2 product : ectonucleoside triphosphate diphosphohydrolase 7 protein_id : NP_444333.3

name	Cox15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541932 CCDS:CCDS29836.1 GeneID:226139 MGI:1920112
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] codon_start : 1 product : COX15 homolog, cytochrome c oxidase assembly protein protein_id : NP_659123.2

name	Cutc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384952 CCDS:CCDS29837.1 GeneID:66388 MGI:1913638
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005507 - copper ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : cutC copper transporter homolog protein_id : NP_079806.1

name	Abcc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116063566 CCDS:CCDS29838.1 GeneID:12780 MGI:1352447
definition	GO_component : GO:0016324 - apical plasma membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IDA]; GO:0046581 - intercellular canaliculus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : multidrug resistance protein 2; canalicular multispecific organic anion transporter product : ATP-binding cassette, sub-family C, member 2 protein_id : NP_038834.2

name	Dnmbp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:36796741 CCDS:CCDS29839.1 GeneID:71972 MGI:1917352
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 product : dynamin binding protein protein_id : NP_082305.1

name	LOC668408 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94406016 GeneID:668408
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001001317.1

name	Cpn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507644 CCDS:CCDS29840.1 GeneID:93721 MGI:2135874
definition	EC_number : 3.4.17.3 GO_function : GO:0004182 - carboxypeptidase A activity [Evidence IEA]; GO:0004180 - carboxypeptidase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004184 - lysine carboxypeptidase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : carboxypeptidase N, polypeptide 1, 50kD; kininase I; anaphylatoxin inactivator product : carboxypeptidase N, polypeptide 1 protein_id : NP_109628.1

name	Cyp2c44 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:48374085 CCDS:CCDS29841.1 GeneID:226143 MGI:1888897
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016712 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen [Evidence IEA]; GO:0050381 - unspecific monooxygenase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006118 - electron transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : cytochrome P450, 2c44 product : cytochrome P450, family 2, subfamily c, polypeptide 44 protein_id : NP_001001446.2

name	Erlin1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981799 CCDS:CCDS29842.1 GeneID:226144 MGI:2387613
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : SPFH domain family, member 1 protein_id : NP_663477.2

name	Chuk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680942 CCDS:CCDS29843.1 GeneID:12675 MGI:99484
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0004672 - protein kinase activity [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004702 - receptor signaling protein serine/threonine kinase activity [Evidence TAS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007252 - I-kappaB phosphorylation [Evidence TAS]; GO:0002011 - morphogenesis of an epithelial sheet [Evidence IMP]; GO:0042475 - odontogenesis (sensu Vertebrata) [Evidence IMP]; GO:0030316 - osteoclast differentiation [Evidence IMP] [Evidence IGI]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation note : IKK 1; IKK alpha; IkappaB kinase alpha product : conserved helix-loop-helix ubiquitous kinase protein_id : NP_031726.1

name	Cwf19l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487291 GeneID:72502 MGI:1919752
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : CWF19-like 1, cell cycle control protein_id : NP_001074546.1

name	Bloc1s2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82998585 GeneID:73689 MGI:1920939
definition	codon_start : 1 product : biogenesis of lysosome-related organelles complex-1, subunit 2 isoform 7 protein_id : XP_906751.1

name	Bloc1s2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:25055365 GeneID:73689 MGI:1920939
definition	codon_start : 1 product : biogenesis of lysosome-related organelles complex-1, subunit 2 isoform 1 protein_id : XP_193940.1

name	Pkd2l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31088870 CCDS:CCDS29846.1 GeneID:329064 MGI:1352448
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IPI] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005261 - cation channel activity [Evidence IPI]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : polycystin-L product : polycystic kidney disease 2-like 1 protein_id : NP_852087.1

name	Scd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13277368 CCDS:CCDS29847.1 GeneID:30049 MGI:1353437
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016717 - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water [Evidence IEA]; GO:0004768 - stearoyl-CoA 9-desaturase activity [Evidence IEA] GO_process : GO:0006633 - fatty acid biosynthesis [Evidence IEA]; GO:0006636 - fatty acid desaturation [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence IEA] codon_start : 1 product : stearoyl-coenzyme A desaturase 3 protein_id : NP_077770.1

name	Scd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677863 CCDS:CCDS29848.1 GeneID:20250 MGI:98240
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016717 - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water [Evidence IEA]; GO:0004768 - stearoyl-CoA 9-desaturase activity [Evidence IEA] GO_process : GO:0006633 - fatty acid biosynthesis [Evidence IEA]; GO:0006636 - fatty acid desaturation [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : stearoyl-Coenzyme A desaturase 2 protein_id : NP_033154.1

name	Scd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38261958 CCDS:CCDS29849.1 GeneID:329065 MGI:2670997
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IDA] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016717 - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water [Evidence IEA]; GO:0004768 - stearoyl-CoA 9-desaturase activity [Evidence IDA] GO_process : GO:0006633 - fatty acid biosynthesis [Evidence IDA]; GO:0006636 - fatty acid desaturation [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence IEA] codon_start : 1 product : stearoyl-CoA desaturase 4 protein_id : NP_899039.2

name	Scd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543675 CCDS:CCDS29850.1 GeneID:20249 MGI:98239
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016717 - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water [Evidence IEA]; GO:0004768 - stearoyl-CoA 9-desaturase activity [Evidence IEA] GO_process : GO:0006633 - fatty acid biosynthesis [Evidence IMP]; GO:0006636 - fatty acid desaturation [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence IEA] codon_start : 1 note : asebia; stearoyl-CoA desaturase product : stearoyl-Coenzyme A desaturase 1 protein_id : NP_033153.2

name	Wnt8b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6756005 GeneID:22423 MGI:109485
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005102 - receptor binding [Evidence TAS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007267 - cell-cell signaling [Evidence TAS]; GO:0007275 - development [Evidence IEA]; GO:0007223 - frizzled-2 signaling pathway [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence TAS]; GO:0007165 - signal transduction [Evidence TAS]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : wingless related MMTV integration site 8b protein_id : NP_035850.1

name	Sec31b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133504851 GeneID:240667 MGI:2685187
definition	codon_start : 1 product : SEC31-like 2 protein_id : NP_001028515.1

name	Ndufb8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385558 CCDS:CCDS29851.1 GeneID:67264 MGI:1914514
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0003954 - NADH dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 protein_id : NP_080337.1

name	Hif1an (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70909332 CCDS:CCDS29852.1 GeneID:319594 MGI:2442345
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IEA]; GO:0004597 - peptide-aspartate beta-dioxygenase activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : hypoxia-inducible factor 1, alpha subunit inhibitor protein_id : NP_795932.2

name	LOC100042700 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042700
definition	number : 2 pseudo : _no_value

name	LOC100042700 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042700
definition	number : 1 pseudo : _no_value

name	LOC629152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629152
definition	number : 1 pseudo : _no_value

name	LOC629152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629152
definition	number : 2 pseudo : _no_value

name	LOC629152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629152
definition	number : 3 pseudo : _no_value

name	LOC629152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629152
definition	number : 4 pseudo : _no_value

name	LOC629152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629152
definition	number : 5 pseudo : _no_value

name	LOC629152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629152
definition	number : 6 pseudo : _no_value

name	LOC629152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629152
definition	number : 7 pseudo : _no_value

name	LOC629152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629152
definition	number : 8 pseudo : _no_value

name	LOC629152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629152
definition	number : 9 pseudo : _no_value

name	LOC629152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629152
definition	number : 10 pseudo : _no_value

clone name	MSMg01-520E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460F13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-232M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061C22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-482H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263C15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-448N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020L04
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-053M15.T7 (MSMg01no053_m15.b1)	MSMg01-053M15.TJ (MSMg01no053_m15.g1)
ACC	AG281909
length	739	687
length of high quality (start - end)	241 (129 - 369)	---
definition	CHROMAT_FILE: MSMg01no053_m15.b1 PHD_FILE: MSMg01no053_m15.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 16:54:48 2005	CHROMAT_FILE: MSMg01no053_m15.g1 PHD_FILE: MSMg01no053_m15.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 16:54:48 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC GGAATTCCAGGACATTTCCGGATACACAGAGAAACCCCGTCTCGAAAAAA CCAAAAACCAAAAACCAAAATAAAAACCCAAAAAAAAAAAAAATTCATTA GCAATTATTTCATTTTATTCTATGTATATGTATGTATGTGGACCATATGT ATGCAATGCCTATGAAGATCAGAAAGAGGAACTGGGCCGGGCGGTGGTGG TGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAAGCGGATTTCTG AGTTCAAGGCCAGCCTGGTCTATTTATTTAGTTCCAGGACAGCCAGGGCT ATACAGAGAAACCCTGTCTCAAAACAAAAAGGTGGGGTGTGTGGTCGGAC TGTTCTCCTCTTTCTTGTTCCTTTTCTCTTTTTTTCTTCCTTTCTTTTCT TTCCCTCTCCTCTCTTCCTTTCTACCCTTTCTCCTACCTCCCCATTTCTC CTTTATCCCTCATCCTCACTTCCCTCCTCTTATATCGCTTCCTCTTTTCC TTTTTTCTCCTTCCTTCTCTCCTTTCTTCACTTTTTCTCCTTAATCCTTT TTCCTTCCATCTTCCCTTTATCCTCTCTTTCATTACCTGTTTTTTCTTCC GCCCCTTTTCTCTTTCCCTCCGCCCCCTTATTTTCTTACCCCATCCCCTA CCCTTTTATCCTTTTTTCCCTTTCCCTCCTTATCCTTTC	NAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
quality values	Open. Hide. 8 8 8 8 10 8 8 9 13 19 33 37 37 30 30 25 22 14 17 8 8 8 19 19 33 37 37 22 19 10 10 12 19 21 9 9 9 9 9 9 8 8 8 8 8 8 12 15 16 25 26 33 33 33 50 33 30 28 28 20 22 14 10 10 10 8 9 9 9 9 9 11 10 13 19 19 30 30 33 33 37 39 39 43 43 47 47 48 48 48 48 57 57 48 48 48 48 48 57 43 42 37 35 35 37 39 33 26 21 15 15 19 20 21 24 22 16 14 12 8 8 8 8 10 18 13 13 14 14 14 28 28 47 35 35 35 39 47 48 47 43 33 34 31 31 22 25 28 43 35 30 30 42 42 48 57 57 54 48 48 42 48 48 50 57 57 68 54 54 54 54 47 47 47 48 48 40 40 41 41 41 36 42 47 47 42 42 37 37 37 42 57 57 57 57 57 57 57 47 47 47 57 57 48 47 47 44 47 44 48 50 50 57 50 50 37 37 37 43 43 28 29 29 43 41 43 41 41 37 43 43 43 43 43 23 23 41 43 41 29 29 32 32 28 28 18 28 28 35 33 35 42 42 42 35 37 37 43 47 59 43 37 37 43 44 32 20 20 20 28 28 31 44 32 20 20 24 24 36 30 28 27 30 30 41 41 41 41 35 39 37 35 35 35 39 36 43 39 32 32 33 33 37 47 35 35 30 30 28 30 28 37 37 35 30 34 32 28 25 22 20 11 11 8 6 6 6 8 6 9 11 23 25 39 39 40 37 37 37 28 24 23 20 20 18 18 18 30 30 28 37 25 25 18 18 18 25 24 30 33 39 43 28 28 15 14 14 17 17 17 14 11 13 10 10 10 10 15 13 13 13 14 18 19 17 15 16 11 11 11 11 12 12 12 15 11 11 11 11 8 10 10 12 10 8 10 10 8 8 6 6 8 6 8 8 12 10 10 10 10 10 10 10 9 8 11 12 12 10 8 8 12 12 10 8 8 10 10 15 10 8 8 8 11 11 13 8 8 8 8 8 8 8 8 8 10 8 10 10 6 6 8 6 8 8 8 8 8 8 8 10 11 8 8 10 10 10 10 10 10 13 8 8 8 8 8 10 15 26 21 19 20 18 13 8 9 8 8 8 8 8 8 8 8 9 10 10 13 10 10 10 10 10 8 8 8 8 8 8 8 10 10 10 10 11 12 9 6 8 8 8 8 8 8 8 8 8 8 8 10 12 11 10 10 10 10 9 9 9 9 10 10 11 10 8 8 8 8 8 10 11 8 8 10 8 8 12 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 11 10 8 8 8 8 8 7 6 6 6 10 9 9 9 10 12 18 15 11 11 8 8 10 10 10 7 7 8 8 12 16 8 8 8 8 8 13 19 19 13 13 13 19 13 8 8 8 8 8 8 8 6 6 8 8 8 9 9 10 10 7 9 8 10 8 8 8 8 8 9 10 11 11 11 11 10 10 8 10 8 8 8 8 8 8 8 8 8 10 8 11 10 15 12 9 8 10 8 8 8 9 8 8 8 6 6 6 6 8 8 10 11 9 9 11 10 8 8 8 10 13 8 10 8 10 8 10 15 15 21 19 15 14 12 12 11 10 9 9 9 9 10 10 12 12 9 9 9 10 8 8 9 9 9	Open. Hide. 0 3 6 6 7 8 15 9 9 9 9 19 18 10 10 9 22 22 33 31 31 44 44 36 36 36 36 36 50 57 57 57 57 57 43 43 43 43 25 26 11 16 15 22 21 47 47 21 21 11 11 11 25 26 54 68 68 68 68 68 48 50 50 50 50 50 57 68 68 50 50 50 50 50 50 50 50 50 57 57 57 68 68 68 68 68 68 68 68 51 51 50 50 50 51 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 50 68 68 50 50 50 50 50 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 57 57 54 54 54 57 59 68 68 68 68 68 68 57 57 57 57 57 57 59 57 57 57 57 57 57 57 57 59 59 59 57 53 48 37 37 37 42 42 41 39 39 39 39 36 39 39 37 47 47 37 39 41 41 47 48 48 48 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 48 48 48 48 48 48 48 48 48 41 41 40 39 39 39 37 32 32 32 32 33 37 36 36 28 28 28 37 37 47 47 59 59 37 37 31 36 39 41 47 47 47 47 59 44 44 37 37 41 37 37 39 40 36 36 36 47 43 41 37 31 31 31 31 37 39 44 47 47 47 47 40 32 28 25 32 32 37 37 43 59 43 41 41 39 39 31 35 36 37 39 37 43 30 25 25 25 33 33 37 37 37 41 34 32 32 35 36 37 39 37 28 28 14 14 14 22 22 29 26 17 17 17 27 26 31 34 14 14 12 22 18 23 30 32 19 23 10 10 10 19 17 27 31 31 27 18 18 11 11 12 11 11 16 26 25 15 15 14 15 15 23 26 32 21 21 14 18 20 26 19 13 13 12 11 11 11 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no053_m15.b1 MSMg01no053_m15.b1 CHROMAT_FILE:
MSMg01no053_m15.b1 PHD_FILE: MSMg01no053_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:48 2005
         (241 letters)



>mm_chr19_43759475_43760115
          Length = 641

 Score =  426 bits (220), Expect = e-124
 Identities = 235/240 (97%)
 Strand = Plus / Minus

                                                                       
Query: 2   aaaaaaaaaaaaaattcattagcaattatttcattttattctatgtatatgtatgtatgt 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aaaaaaaaaaaaaattcattagcaattatttcattttattctatgtatatgtatgtatgt 248

                                                                       
Query: 62  ggaccatatgtatgcaatgcctatgaagatcagaaagaggaactgggccgggcggtggtg 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ggaccatatgtatgcaatgcctatgaagatcagaaagaggaactgggccgggcggtggtg 188

                                                                       
Query: 122 gtgcacgcctttaatcccagcacttgggaggcagaggcaagcggatttctgagttcaagg 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 gtgcacgcctttaatcccagcacttgggaggcagaggcaagcggatttctgagttcaagg 128

                                                                       
Query: 182 ccagcctggtctatttatttagttccaggacagccagggctatacagagaaaccctgtct 241
           |||||||||||||   | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ccagcctggtctacagagtgagttccaggacagccagggctatacagagaaaccctgtct 68



 Score = 83.9 bits (43), Expect = 8e-21
 Identities = 61/67 (91%)
 Strand = Plus / Plus

                                                                       
Query: 125 cacgcctttaatcccagcacttgggaggcagaggcaagcggatttctgagttcaaggcca 184
           |||||||||||||||||||||||||||||||||||| | ||  |||| ||||| ||||||
Sbjct: 575 cacgcctttaatcccagcacttgggaggcagaggcaggtgggcttctcagttcgaggcca 634

                  
Query: 185 gcctggt 191
           |||||||
Sbjct: 635 gcctggt 641


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space:   146624
Effective search space used:   146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information