Query= MSMg01no053_p03.b1 MSMg01no053_p03.b1 CHROMAT_FILE:
MSMg01no053_p03.b1 PHD_FILE: MSMg01no053_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:00 2005
(491 letters)
>mm_chr10_17382468_17383358
Length = 891
Score = 571 bits (295), Expect = e-167
Identities = 349/367 (95%)
Strand = Plus / Minus
Query: 125 catgtcttaatgatctcgcatggtgtgaagagacaccgtgatcaaagtaacataaaaaga 184
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 891 catgtcttaatgatctcgcatggtatgaagagacaccatgatcaaagtaacataaaaaga 832
Query: 185 aagcattagatttggggggttgctaatacagttcagggggttagtccatgtctatcatgg 244
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 831 aagcattagatttggggggttgctaatacagttcagagggtcagtccatgtctatcatgg 772
Query: 245 ccggaagcatggtagcaggcaggcaggcattgatagattacatcttgatcctcaagttgg 304
|||||||||||| ||||||||| | |||||||| |||||||||| |||||||||||||||
Sbjct: 771 ccggaagcatggcagcaggcagaccggcattgagagattacatcctgatcctcaagttgg 712
Query: 305 aggcagagagactctgagaaaacctttgtaatgtattataatgtcctcagtagaacaaaa 364
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 711 aggcagagagactctgagaaaacctttgtaatgtattataatgtactcagtagaacaaaa 652
Query: 365 acagtaatttgccctgaattctatagtaggtgccagtagttcatgtgctcggccttcata 424
|||| |||||| |||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 651 acagcaatttgggctgaattctagaggaggtgccaatagttcatgtgctcggccttcata 592
Query: 425 tatacaccctgcatctttgtcttgacttccttagctatgctttctctgagacccatatta 484
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tattcaccctgtatctttgtcttgacttccttagctatgctttctctgagacccatatta 532
Query: 485 ttttcag 491
|||||||
Sbjct: 531 ttttcag 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no053_p03.g1 MSMg01no053_p03.g1 CHROMAT_FILE:
MSMg01no053_p03.g1 PHD_FILE: MSMg01no053_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:00 2005
(566 letters)
>mm_chr19_23300867_23301832
Length = 966
Score = 1029 bits (532), Expect = 0.0
Identities = 561/572 (98%), Gaps = 6/572 (1%)
Strand = Plus / Plus
Query: 1 cttaggggggctggagagatgtctcagcggttaagagcactgactgctcttccaaaggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 cttaggggggctggagagatgtctcagcggttaagagcactgactgctcttccaaaggac 254
Query: 61 ctgagttaaattcccagcaactacgtggtggctcacaaccacccgtagcgagatctgaca 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ctgagttaaattcccagcaaccacgtggtggctcacaaccacccgtagcgagatctgaca 314
Query: 121 ccctcctctggagtgtctgaagacagctacagtgtacttac-t-taataaataaataaat 178
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 315 ccctcctctggagtgtctgaagacagctacagtgtacttacatataataaataaataaat 374
Query: 179 ctttgctgggcggtggtggcgcacgcctttaatcccagcacttgggaggcaaaggcaggc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ctttgctgggcggtggtggcgcacgcctttaatcccagcacttgggaggcaaaggcaggc 434
Query: 239 ggatttctgagtttgaggccagcctggtctacaaagtgagtttcaggacagccagggcga 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggatttctgagtttgaggccagcctggtctacaaagtgagtttcaggacagccagggcga 494
Query: 299 tacagaaaaaccctgtctcgagaaaaaaaaaaaaaaagaaagaaagaaagaaagaaagaa 358
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 495 tacagaaaaaccctgtctcgagaaaaaaagaaagaaagaaagaaagaaagaaagaaagaa 554
Query: 359 agaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag-aa---agaaagaaagaa 414
|||||||||||||||||||||||||||||||||||||| ||| || |||||||||| |
Sbjct: 555 agaaagaaagaaagaaagaaagaaagaaagaaagaaaggaaggaaggaagaaagaaagga 614
Query: 415 agaaagaaagaaagaaaagaattccttggatcacatctgagtttattttaaggggagaag 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 agaaagaaagaaagaaaagaattccttggatcacatctgagtttattttaaggggagaag 674
Query: 475 ttagaattaaatgggtgaagaagtcatcagtgggcaatggcagaggactgattgtatagt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ttagaattaaatgggtgaagaagtcatcagtgggcaatggcagaggactgattgtatagt 734
Query: 535 tataaagttttgaatcatagaacatcaccacg 566
||||||||||||||||||||||||||||||||
Sbjct: 735 tataaagttttgaatcatagaacatcaccacg 766
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 90
Number of extensions: 30
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space: 531536
Effective search space used: 531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
