Query= MSMg01no054_p12.b1 MSMg01no054_p12.b1 CHROMAT_FILE:
MSMg01no054_p12.b1 PHD_FILE: MSMg01no054_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:16 2005
(340 letters)
>mm_chr19_37461837_37462576
Length = 740
Score = 644 bits (333), Expect = 0.0
Identities = 336/337 (99%)
Strand = Plus / Minus
Query: 4 ggaattctacttgcctcctaagtgttgtgatcaagtcataggccaccacaccttgctttg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ggaattctacttgcctcctaagtgttgtgatcaagtcataggccaccacaccttgctttg 481
Query: 64 gtttggtttttgagtcaacagaaaggttagaggtaataggaaaaggctgtgctttataca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 480 gtttggtttttgagtcaacagaaaggttagaggtaataggaaaaggctgtgctttgtaca 421
Query: 124 gcccagctggtctagtcacacatatatggctcatcttcaactcatcatcatttccctggc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gcccagctggtctagtcacacatatatggctcatcttcaactcatcatcatttccctggc 361
Query: 184 atcccaaatgctggaatttcacacgtgaaccaccacacctcactcatttgaaaaagaata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atcccaaatgctggaatttcacacgtgaaccaccacacctcactcatttgaaaaagaata 301
Query: 244 tctttagaacattaatacttccacactaatttaacttatctttgctttcctttcaacaat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tctttagaacattaatacttccacactaatttaacttatctttgctttcctttcaacaat 241
Query: 304 cttccagtattgcgagcctctttatgaatctgagtac 340
|||||||||||||||||||||||||||||||||||||
Sbjct: 240 cttccagtattgcgagcctctttatgaatctgagtac 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no054_p12.g1 MSMg01no054_p12.g1 CHROMAT_FILE:
MSMg01no054_p12.g1 PHD_FILE: MSMg01no054_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:16 2005
(283 letters)
>mm_chr19_37293610_37294291
Length = 682
Score = 516 bits (267), Expect = e-151
Identities = 279/283 (98%), Gaps = 1/283 (0%)
Strand = Plus / Plus
Query: 1 ctttttgtacagtgcccgttgttccctcgatggtctcgtattattcccatgttatgtagc 60
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 201 ctttttgtacagtgcccgttgttccctcgatggtctcgta-gattcagatgttatgtagc 259
Query: 61 cagaggacacctctgtttcttgaacagtctagagaacatacagtgggggcctttcctctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cagaggacacctctgtttcttgaacagtctagagaacatacagtgggggcctttcctctt 319
Query: 121 tccctttgtgtttgtcattgtggctggttactggaagatggctcccgcactgaagagcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tccctttgtgtttgtcattgtggctggttactggaagatggctcccgcactgaagagcag 379
Query: 181 tgtgtgcctttaatcccaggagttggaaggcaaaagcaggtacatctctttgagtttggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtgtgcctttaatcccaggagttggaaggcaaaagcaggtacatctctttgagtttggg 439
Query: 241 gccatcctgatctatatgatgagttccagaccatccagggcta 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gccatcctgatctatatgatgagttccagaccatccagggcta 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 682
Length adjustment: 9
Effective length of query: 274
Effective length of database: 673
Effective search space: 184402
Effective search space used: 184402
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
