Query= MSMg01no055_a20.b1 MSMg01no055_a20.b1 CHROMAT_FILE:
MSMg01no055_a20.b1 PHD_FILE: MSMg01no055_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:22 2005
(646 letters)
>mm_chr19_24875208_24876254
Length = 1047
Score = 1189 bits (615), Expect = 0.0
Identities = 636/643 (98%), Gaps = 3/643 (0%)
Strand = Plus / Plus
Query: 5 gaattcaatattcgtctgttgatgagtaagtgaatttgtcacaataagcaaggaacatca 64
|||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaataaacgtccgttgatgagtaagtgaatttgtcacaataagcaaggaacatca 264
Query: 65 aaggggacggcgtttggaggggaatgcccataattctagaatattcttcaatgatgagca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaggggacggcgtttggaggggaatgcccataattctagaatattcttcaatgatgagca 324
Query: 125 agta-tttaaattcgttgtattcttgacagaactgggacttagcaagatgccacttccca 183
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtaatttaaattcgttgtattcttgacagaactgggacttagcaagatgccacttccca 384
Query: 184 gaagaacacaggtccagctcctcacaggagggcttcggaaatgtttctctcttttctgga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaagaacacaggtccagctcctcacaggagggcttcggaaatgtttctctcttttctgga 444
Query: 244 ttcttttttttttcttatataatattttattaactttttgagaacttcacaaaatgtgtt 303
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttcttttttttt-cttatataatattttattaactttttgagaacttcacaaaatgtgtt 503
Query: 304 ttttataattcctgcttttattcttcttgcttgtttgtaatatagttttagagcctcaca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttttataattcctgcttttattcttcttgcttgtttgtaatatagttttagagcctcaca 563
Query: 364 catgagcacagcatctacctcatgcctgccattccctctcctccccaagcccctctctca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 catgagcacagcatctacctcatgcctgccattccctctcctccccaagcccctctctca 623
Query: 424 agttcaggatttcttttgtaattaattttccatgtacatacatatgccttgtgtacttat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agttcaggatttcttttgtaattaattttccatgtacatacatatgccttgtgtacttat 683
Query: 484 gcgcccatgtatatatcaccttctgagtcatttagctttgcgtgtgtgtacatgtgtcca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gcgcccatgtatatatcaccttctgagtcatttagctttgcgtgtgtgtacatgtgtcca 743
Query: 544 gagctgaccactaggggttaaacaacctatgtcctaacttactcctgaaggagacttgat 603
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 744 gagctgaccactaggggttaaacaacctatgtcctaacttactcctgaaggagact-gat 802
Query: 604 ctgccccttatcaggaggcactgacctcctgtggcacttatct 646
|||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 803 ctgccccttatcaggaggcactgacctcctgtagcacttatct 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1047
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1037
Effective search space: 659532
Effective search space used: 659532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_a20.g1 MSMg01no055_a20.g1 CHROMAT_FILE:
MSMg01no055_a20.g1 PHD_FILE: MSMg01no055_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:22 2005
(331 letters)
>mm_chr19_25051489_25052219
Length = 731
Score = 632 bits (327), Expect = 0.0
Identities = 330/331 (99%)
Strand = Plus / Minus
Query: 1 agaaatgtaacatggaacccagacacaaataggactttcctgagacaaatggcaaaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 agaaatgtaacatggaacccagacacaaataggactttcctgagacaaatggcaaaattc 582
Query: 61 aaataaagtctaaaaagtaattaatgataacctgccagtgttaatctcctgccttctgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 aaataaagtctaaaaagtaattaatgataacctgccagtgttaatctcctgccttctgca 522
Query: 121 acactacagtaattggaagataggtaaagatgaagggcacgggagaagccctgtcaagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 acactacagtaattggaagataggtaaagatgaagggcacgggagaagccctgtcaagta 462
Query: 181 attgtaacttttgtaggttgaaggtttcaaagtgaaaagtcaaaatacaaagaaaagttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 attgtaacttttgtaggttgaaggtttcaaagtgaaaagtcaaaatacaaagaaaagttt 402
Query: 241 tgttttaagctgggcaaatgacagtggtttgataaaaagaagcaaatgttgactttgtag 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 401 tgttttaagctgggcaaatgacagtggtttgataataagaagcaaatgttgactttgtag 342
Query: 301 actaaagttctacccattgctttgaaagcaa 331
|||||||||||||||||||||||||||||||
Sbjct: 341 actaaagttctacccattgctttgaaagcaa 311
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
