Query= MSMg01no057_a20.b1 MSMg01no057_a20.b1 CHROMAT_FILE:
MSMg01no057_a20.b1 PHD_FILE: MSMg01no057_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:52 2005
(636 letters)
>mm_chr19_22341112_22342148
Length = 1037
Score = 1120 bits (579), Expect = 0.0
Identities = 618/631 (97%), Gaps = 1/631 (0%)
Strand = Plus / Plus
Query: 7 gaattcttaagac-atactagattataatattgtgtgtttcctttaaggtcattcacaat 65
||||||||||||| ||| |||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 207 gaattcttaagacaatattagattataatattgtgtgttttctttaaggttattcacaat 266
Query: 66 tttgtgatgaagagagatgaagaaatattcttggaatatattattatagtagaataatct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tttgtgatgaagagagatgaagaaatattcttggaatatattattatagtagaataatct 326
Query: 126 ctccaataccttttgtaggtctgttaaagaaaaaaaattcagttcaggaacagattgtaa 185
| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 327 ccccaataccttttgtagttctgttaaagaaaaaaatttcagttcaggaacagattttaa 386
Query: 186 aattagcggataaataccagatatacaaatgcttctttcatcttttgttgtcttagtatc 245
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 387 aattagcggataaataccagatatacatatgcttctttcatcttttgttgtcttagtatc 446
Query: 246 ttctgtttggtggctaaaaaatggaaaatactattttagtttaagcctgaattagtgact 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttctgtttggtggctaaaaaatggaaaatactattttagtttaagcctgaattagtgact 506
Query: 306 taattttgataagagttttgataatattgtatcctaaaataagagggagactctggtcgt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 taattttgataagagttttgataatattgtatcctaaaataagagggagactctggtcgt 566
Query: 366 ttggaggtgacatatcctcaaagattgattcacagtagccaagtcacaagacgcaacttg 425
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 567 ttggaggtgacatatcctcaaagattgattcacagtagccaagtcacaagacacaacttg 626
Query: 426 acccactccttaagtcacaggataaacttcacatcgtataggaactatgtcagctaacta 485
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 627 gcccactccttaagtcacaggataaacttcacatcgtataggaacaatgtcagctaacta 686
Query: 486 tgtaagatgctttctttgagcaaatagttgtaccctagtgatcagattacataaatagga 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tgtaagatgctttctttgagcaaatagttgtaccctagtgatcagattacataaatagga 746
Query: 546 aacaatcttggaggctgtgaaatgagagcaatgggaattgagttttaacaggtactgctt 605
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 747 aacaatcttggaggctgtgaaatgagagcaatgggaattaagttttaacaggtactgctt 806
Query: 606 tcaagggtattttactctttgtcccttcagg 636
|||||||||||||||||||||||||||||||
Sbjct: 807 tcaagggtattttactctttgtcccttcagg 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1037
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1027
Effective search space: 642902
Effective search space used: 642902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_a20.g1 MSMg01no057_a20.g1 CHROMAT_FILE:
MSMg01no057_a20.g1 PHD_FILE: MSMg01no057_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:52 2005
(574 letters)
>mm_chr19_22412204_22413177
Length = 974
Score = 1094 bits (566), Expect = 0.0
Identities = 572/574 (99%)
Strand = Plus / Minus
Query: 1 tctgacttgaaagccctctcagcagttgcttgcttcccaggctgagcaatcccaggctag 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 tctgacttgaaagctctctcagcagttgcttgcttcccaggctgagcaatcccaggctag 715
Query: 61 ctcaccgggaacactttctgcacactctgaaagaacaatacctaaaggtacaatcactta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 ctcaccgggaacactttctgcacactctgaaagaacaatacctaaaggtacaatcactta 655
Query: 121 aacctttctcttataagtgcccaccccaaatttgaataggatcaaagtaagctagtgagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 aacctttctcttataagtgcccaccccaaatttgaataggatcaaagtaagctagtgagg 595
Query: 181 ataccagtaaactcagaagagaagttacgactctcttaagaagtacaaaaccaattgtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ataccagtaaactcagaagagaagttacgactctcttaagaagtacaaaaccaattgtaa 535
Query: 241 aacactaattcgcctgcattattccaatcattccaaattatcaattacttgggagcacta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 aacactaattcgcctgcattattccaatcattccaaattatcaattacttgggagcacta 475
Query: 301 atgtgattgtagatgtattccccgagaatctttaaaagtgataaacagtgaaagtataaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 atgtgattgtagatgtattccccgagaatctttaaaagtgataaacagtgaaagtataaa 415
Query: 361 cagccatgtgttttactacagctaatacaatttgaaggtcccctatgtgaaattataata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 cagccatgtgttttactacagctaatacaatttgaaggtcccctatgtgaaattataata 355
Query: 421 taatccaacaacatgatgctactaaaaaaactaacaataaagccttaagagaaagacatc 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 354 taatccaacaacatgatgctacttaaaaaactaacaataaagccttaagagaaagacatc 295
Query: 481 acacatatccacccccaataaatattttattactatatatccatacagtcttttcattga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 acacatatccacccccaataaatattttattactatatatccatacagtcttttcattga 235
Query: 541 ctttaaagacttttacatagacttttattttctt 574
||||||||||||||||||||||||||||||||||
Sbjct: 234 ctttaaagacttttacatagacttttattttctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
