CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGCCGCGGAA
TTCACTCCTACATCCCAAAAGGAATAGGAAAGCTCAATTAAAATGAACAA
AGGGCTTGAATCAATACAATGCCCAAGAAATACAGATGAATATATGAAAA
TGTACTCAACATCATTATCCATTAGGGAAGTGCATAGCAAGACCACACAG
TGTGATAAACAGTGAACTTACAACCACTAGAGCTATAAATTCATTAGCAT
ACATTAAGTTTATAAAACCATTATTCTCAATGTCTTTTGTTGAAGATAGC
TATAACTTTTTAATATAAATCAAGGAGTCTTTGTGAGGATATGGAGAAGT
GAAGTGTTTGTGCTTTTCTGTAAGGAATATGCAATGAGTCCACTTCCTAA
GAAAACAACTGGGTGGTAAATTATGATCCTGTCATTCTCAAAAGAGTCAA
CTGAATATCTTCAGATAATTTGGACAACAATATTCAAAATAGCCAAATTT
ATAAACAGCCCAAAGTTCATCAGCTGATGGAATGTGGCATATCCATACAC
TGGAATATAGTTCAAACATAAAAATTGGTCAACTACTGATAAATGCTAGA
TCGTGGAAAAGCCTTGAAAGGATCATGCTAAATGGAAGAAGCCAATCACA
AAGGTTATATATCAAATGATTCTATTTATGTGGCATCTCTACTATGGGCT

CAATGAAGTGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCAGTTTCTTTGTGTGCCCACCTGAATC
AGCTGGGGGAATTTACTTAACCTACTCATAAGCTTTTTCTATACATAATC
TCTTTCCACTTGAGAAACTTTTATAACATTGAATGTATAGATATATAAAA
CAGATACACAAATCAATCATTTATAGATGATAATTCATAAAGAAATTTGT
TTTAAAATACTTCCTTGTATATACCTAATTTTATTATTTATTAAAGATGA
GAGTAAATTTGCATGCTGAGATAGATTTATTTTTGCATAAAGAATTAAAT
CTTGGTTTAATATTTGATACTGCAGGATACAGAGCATCCACAGTGTTTTT
CGGAGTTGATTGATATTTTGATTTTATAATCGTCAGCACTGAGAATGTCA
CTTTGCATAAACACATAGTACAAAACAACAGAAGTATGTTTAGGGACATG
TTAGAGATTCTTGGAAATTCTACCCTAATTCCAAGCCAAAATTCATCTAA
TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTNTCT
TNNNNNNCCCTTTCTTTTTTTTCCCTTCTTTCTTCCCTTTTTCTCTCTCT
TTTCTCTTTCCNCCTCTTCTTTCTCTCTTTACCTCTCCCCCTCTCTTTCC

Query= MSMg01no057_a22.b1 MSMg01no057_a22.b1 CHROMAT_FILE:
MSMg01no057_a22.b1 PHD_FILE: MSMg01no057_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:52 2005
         (595 letters)



>mm_chr19_33230285_33231279
          Length = 995

 Score = 1122 bits (580), Expect = 0.0
 Identities = 589/592 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   gaattcactcctacatcccaaaaggaataggaaagctcaattaaaatgaacaaagggctt 63
           ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 gaattcactcctacaactcaaaaggaataggaaagctcaattaaaatgaacaaagggctt 762

                                                                       
Query: 64  gaatcaatacaatgcccaagaaatacagatgaatatatgaaaatgtactcaacatcatta 123
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 761 gaatcaatacaatgcccaagaaatacagatgaatacatgaaaatgtactcaacatcatta 702

                                                                       
Query: 124 tccattagggaagtgcatagcaagaccacacagtgtgataaacagtgaacttacaaccac 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tccattagggaagtgcatagcaagaccacacagtgtgataaacagtgaacttacaaccac 642

                                                                       
Query: 184 tagagctataaattcattagcatacattaagtttataaaaccattattctcaatgtcttt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 tagagctataaattcattagcatacattaagtttataaaaccattattctcaatgtcttt 582

                                                                       
Query: 244 tgttgaagatagctataactttttaatataaatcaaggagtctttgtgaggatatggaga 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tgttgaagatagctataactttttaatataaatcaaggagtctttgtgaggatatggaga 522

                                                                       
Query: 304 agtgaagtgtttgtgcttttctgtaaggaatatgcaatgagtccacttcctaagaaaaca 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 agtgaagtgtttgtgcttttctgtaaggaatatgcaatgagtccacttcctaagaaaaca 462

                                                                       
Query: 364 actgggtggtaaattatgatcctgtcattctcaaaagagtcaactgaatatcttcagata 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 actgggtggtaaattatgatcctgtcattctcaaaagagtcaactgaatatcttcagata 402

                                                                       
Query: 424 atttggacaacaatattcaaaatagccaaatttataaacagcccaaagttcatcagctga 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 atttggacaacaatattcaaaatagccaaatttataaacagcccaaagttcatcagctga 342

                                                                       
Query: 484 tggaatgtggcatatccatacactggaatatagttcaaacataaaaattggtcaactact 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tggaatgtggcatatccatacactggaatatagttcaaacataaaaattggtcaactact 282

                                                               
Query: 544 gataaatgctagatcgtggaaaagccttgaaaggatcatgctaaatggaaga 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gataaatgctagatcgtggaaaagccttgaaaggatcatgctaaatggaaga 230


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space:   576225
Effective search space used:   576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)