Query= MSMg01no057_e11.b1 MSMg01no057_e11.b1 CHROMAT_FILE:
MSMg01no057_e11.b1 PHD_FILE: MSMg01no057_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:10 2005
(618 letters)
>mm_chr19_57645406_57646423
Length = 1018
Score = 1127 bits (583), Expect = 0.0
Identities = 607/615 (98%)
Strand = Plus / Plus
Query: 4 ggaattcttcatgtgcctttaagttgtgggagaatagggctcctttcctaatagtgcagt 63
||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaatccttcatgggcttttaagttgtgggagaatagggctcctttcctaatagtgcagt 263
Query: 64 caccgagtcatttagtaataagaaaactcttagaaagattgtgggtattctaagtttctg 123
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cactgagtcatttagtaataagaaaactcttagaaagattgtgggtattctaagtttctg 323
Query: 124 ggctaatatccacttatcagtgagtgcatatcatgtgtgttcttttgtgattgggttacc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggctaatatccacttatcagtgagtgcatatcatgtgtgttcttttgtgattgggttacc 383
Query: 184 tcactcaggatgatatcctccagatccatccatttgcctaagaatttcataaactcattg 243
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcactcaggatggtatcctccagatccatccatttgcctaagaatttcataaactcattg 443
Query: 244 tttttaatagctgagtagcactccattgtgtaaatgtaccacattttctgtatccattcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttttaatagctgagtagcactccattgtgtaaatgtaccacattttctgtatccattcc 503
Query: 304 tctgttgagggacatctgggtttttttccagcttctggctattataagtaagactgctat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tctgttgagggacatctgggtttttttccagcttctggctattataagtaagactgctat 563
Query: 364 gaacataccggagcatgtgtccttattatagttggaacatatgctgggtatatgcccagg 423
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaacatagtggagcatgtgtccttattatagttggaacatatgctgggtatatgcccagg 623
Query: 424 agaggtattgcaggatcttctggtagtactatgtccaattttctgaggaaccaccagact 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agaggtattgcaggatcttctggtagtactatgtccaattttctgaggaaccaccagact 683
Query: 484 tatttccagagtggttatacaagcttgcaatcccaccagcagtggaggagtgttcctctt 543
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tatttccagagtggttgtacaagcttgcaatcccaccagcagtggaggagtgttcctctt 743
Query: 544 tctccacatcctcgccagcatctgctgtcacctgaatttttgattttagccattttgact 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tctccacatcctcgccagcatctgctgtcacctgaatttttgattttagccattttgact 803
Query: 604 gatataaggtagaat 618
|||||||||||||||
Sbjct: 804 gatataaggtagaat 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_e11.g1 MSMg01no057_e11.g1 CHROMAT_FILE:
MSMg01no057_e11.g1 PHD_FILE: MSMg01no057_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:10 2005
(305 letters)
>mm_chr19_57727729_57728433
Length = 705
Score = 493 bits (255), Expect = e-144
Identities = 293/311 (94%), Gaps = 9/311 (2%)
Strand = Plus / Minus
Query: 4 cgtctgtgcacagcactcggctccatctctgtcacggagctctctgcagaatcagaaacc 63
|||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||| |
Sbjct: 411 cgtctgtgcacagcactcagctccatctctgtcacagagttctctgcagaatcagaaatc 352
Query: 64 ccattctaagagtcaactataagagcaagggctacggaaaagtagaccagtctgtcaaag 123
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ccatgctaagagtcatctataagagcaagggctacggaaaagtagaccagtctgtcaaag 292
Query: 124 cgaagagacttctttaaaacagtacaaagcaggtctgaagacagtgtggtctgacacaaa 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 291 cgaagagacttctttaaaacagtacaaagcaggtctgaagacagtgtggtctgacataaa 232
Query: 184 tcagcacaggagaatgaggagcccaga---------gtaataagagacgcgcctgtggtc 234
||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 231 tcagcacaggagaatgaggagcccagagacgcactggtgataagagacgcgcctgtggtc 172
Query: 235 agacggcgctaagactactcaatgagaaaaggtgctgctctgtagtaaatgtgggaaaca 294
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 agacgacgctaagactactcaatgagaaaaggtgctgctctgtagtaaatgtgggaaaca 112
Query: 295 cagacacggca 305
|||||||||||
Sbjct: 111 cagacacggca 101
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 305
Length of database: 705
Length adjustment: 9
Effective length of query: 296
Effective length of database: 696
Effective search space: 206016
Effective search space used: 206016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
