Query= MSMg01no058_p21.b1 MSMg01no058_p21.b1 CHROMAT_FILE:
MSMg01no058_p21.b1 PHD_FILE: MSMg01no058_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:23 2005
(244 letters)
>mm_chr19_3914831_3915474
Length = 644
Score = 472 bits (244), Expect = e-138
Identities = 244/244 (100%)
Strand = Plus / Plus
Query: 1 ggtgtgtttttataaacccaccaacgtgatctctctgtagcttctcacccacatgtttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggtgtgtttttataaacccaccaacgtgatctctctgtagcttctcacccacatgtttag 260
Query: 61 tgcaagcatatctgcaaagttccaccacagactgtagggaggtgggagagaggcaggcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcaagcatatctgcaaagttccaccacagactgtagggaggtgggagagaggcaggcta 320
Query: 121 gttggacagtcagtggggaggggcttatgctgcactgggcactgagaagggggcacatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttggacagtcagtggggaggggcttatgctgcactgggcactgagaagggggcacatct 380
Query: 181 tctgcagttaatgtggtcaggtagcaggatggggatgcaggtagggggtcagcccaggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgcagttaatgtggtcaggtagcaggatggggatgcaggtagggggtcagcccaggag 440
Query: 241 ggca 244
||||
Sbjct: 441 ggca 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no058_p21.g1 MSMg01no058_p21.g1 CHROMAT_FILE:
MSMg01no058_p21.g1 PHD_FILE: MSMg01no058_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:23 2005
(320 letters)
>mm_chr19_4025108_4025827
Length = 720
Score = 596 bits (308), Expect = e-175
Identities = 317/320 (99%)
Strand = Plus / Minus
Query: 1 actgaagttcaggcagcgcaagcagagggacatgaggaggtttagtgtcctggctgaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 actgaagttcaggcagcgcaagcagagggacatgaggaggtttagtgtcctggctgaagt 461
Query: 61 ggtagctcagggctggtgaggttggtgtgcatgacgagggctggttccatgtgttgaggc 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 460 ggtagctcagggctggtgaggttggtgtggatgacgagggctggttccatgtgttgaggc 401
Query: 121 tgacgggtggaaccatccatggtctcaaagcaaacctgaatggtgctttgtgagtctcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tgacgggtggaaccatccatggtctcaaagcaaacctgaatggtgctttgtgagtctcag 341
Query: 181 gacacagggtagcggtgggcagtgcgaggcatcagtaagaaggacaaggaaatgggccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gacacagggtagcggtgggcagtgcgaggcatcagtaagaaggacaaggaaatgggccag 281
Query: 241 catgccttctgtccctgccctgctctgctgcagggaggctactgtcctggtgggaatttc 300
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 280 catgccttctgtccctgccctgctctgctgcagggaggccactgtcctgatgggaatttc 221
Query: 301 atcccctccttttgagatag 320
||||||||||||||||||||
Sbjct: 220 atcccctccttttgagatag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|