MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-059N04
Chromosome	19 (Build37)
Map Location	33,552,547 - 33,552,996
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Minpp1, Papss2, Atad1, Pten, B430203M17Rik, 6530404N21Rik, LOC638381, EG668095
Downstream gene	LOC628236, AI747699, EG668106, EG668112, EG668114, EG329055, EG433241, LOC668127, Lipf, Lipk, EG383462, Lipn, Ankrd22, Stambpl1, Acta2, Fas, Ch25h
Link	Open Mouse BAC browser

Click to get alignment info.

name	Minpp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17330 MGI:1336159
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Papss2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23972 MGI:1330223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atad1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67979 MGI:1915229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pten (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19211 MGI:109583
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B430203M17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320193 MGI:2443558
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6530404N21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67795 MGI:1915045
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 4 Proteins

name	LOC638381 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:638381
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG668095 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668095 MGI:3648531
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	LOC628236 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:628236
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 10 Proteins

name	AI747699 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381236 MGI:2147592
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668106 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668106 MGI:3647649
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 39 ESTs, 10 Proteins

name	EG668112 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668112 MGI:3644463
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	EG668114 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668114 MGI:3644466
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 30 ESTs, 9 Proteins

name	EG329055 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329055 MGI:3647308
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 40 ESTs, 9 Proteins

name	EG433241 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433241 MGI:3645618
definition	note : predicted gene, EG433241 pseudo : _no_value

name	LOC668127 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668127
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Lipf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67717 MGI:1914967
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lipk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240633 MGI:2679259
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG383462 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:383462 MGI:3643323
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins

name	Lipn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70166 MGI:1917416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ankrd22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52024 MGI:1277101
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stambpl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76630 MGI:1923880
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acta2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11475 MGI:87909
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fas (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14102 MGI:95484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ch25h (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12642 MGI:1333869
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Minpp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754697 GeneID:17330 MGI:1336159
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : multiple inositol polyphosphate histidine phosphatase 1 transcript_id : NM_010799.1

name	Papss2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130006 GeneID:23972 MGI:1330223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 3'-phosphoadenosine 5'-phosphosulfate synthase 2 transcript_id : NM_011864.3

name	Atad1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129838 GeneID:67979 MGI:1915229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase family, AAA domain containing 1 transcript_id : NM_026487.3

name	Pten (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86355519 GeneID:19211 MGI:109583
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatase and tensin homolog transcript_id : NM_008960.2

name	B430203M17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342796 GeneID:320193 MGI:2443558
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B430203M17 gene transcript_id : NM_177096.2

name	6530404N21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270499 GeneID:67795 MGI:1915045
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 4 Proteins product : RIKEN cDNA 6530404N21 gene transcript_id : XM_001481318.1

name	LOC628236 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270427 GeneID:628236
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 10 Proteins product : hypothetical LOC628236 transcript_id : XM_001477705.1

name	AI747699 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375244 GeneID:381236 MGI:2147592
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI747699 transcript_id : NM_001013770.3

name	EG668106 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270503 GeneID:668106 MGI:3647649
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 39 ESTs, 10 Proteins product : predicted gene, EG668106 transcript_id : XM_994335.2

name	EG668114 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94405977 GeneID:668114 MGI:3644466
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 30 ESTs, 9 Proteins product : predicted gene, EG668114 transcript_id : XM_994361.1

name	EG329055 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270508 GeneID:329055 MGI:3647308
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 40 ESTs, 9 Proteins product : predicted gene, EG329055 transcript_id : XM_285300.7

name	Lipf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376633 GeneID:67717 MGI:1914967
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipase, gastric transcript_id : NM_026334.2

name	Lipk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361314 GeneID:240633 MGI:2679259
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipase, family member K transcript_id : NM_172837.2

name	EG383462 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270433 GeneID:383462 MGI:3643323
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins product : predicted gene, EG383462 transcript_id : XM_357078.5

name	Lipn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365493 GeneID:70166 MGI:1917416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipase, family member N transcript_id : NM_027340.2

name	Ankrd22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359619 GeneID:52024 MGI:1277101
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat domain 22 transcript_id : NM_024204.5

name	Stambpl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130651 GeneID:76630 MGI:1923880
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Stam binding protein like 1 transcript_id : NM_029682.4

name	Acta2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982518 GeneID:11475 MGI:87909
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : actin, alpha 2, smooth muscle, aorta transcript_id : NM_007392.2

name	Fas (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679750 GeneID:14102 MGI:95484
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fas (TNF receptor superfamily member) transcript_id : NM_007987.1

name	Ch25h (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6857768 GeneID:12642 MGI:1333869
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cholesterol 25-hydroxylase transcript_id : NM_009890.1

name	Minpp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754698 CCDS:CCDS29751.1 GeneID:17330 MGI:1336159
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004446 - multiple inositol-polyphosphate phosphatase activity [Evidence IEA] codon_start : 1 product : multiple inositol polyphosphate histidine phosphatase 1 protein_id : NP_034929.1

name	Papss2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61098088 GeneID:23972 MGI:1330223
definition	GO_component : GO:0005622 - intracellular [Evidence ISS] GO_function : GO:0004020 - adenylylsulfate kinase activity [Evidence IDA]; GO:0005524 - ATP binding [Evidence IEA] [Evidence ISS]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence ISS] [Evidence IEA]; GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence ISS] [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA] GO_process : GO:0001501 - skeletal development [Evidence ISS]; GO:0000103 - sulfate assimilation [Evidence IDA] codon_start : 1 note : brachymorphic product : 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein_id : NP_035994.2

name	Atad1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560168 CCDS:CCDS29752.1 GeneID:67979 MGI:1915229
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA] codon_start : 1 product : ATPase family, AAA domain containing 1 protein_id : NP_080763.2

name	Pten (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679523 CCDS:CCDS29753.1 GeneID:19211 MGI:109583
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0051717 - inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity [Evidence ISS]; GO:0030165 - PDZ domain binding [Evidence ISS]; GO:0016314 - phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity [Evidence ISS] [Evidence IDA]; GO:0051800 - phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity [Evidence ISS]; GO:0004438 - phosphatidylinositol-3-phosphatase activity [Evidence ISS]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0004722 - protein serine/threonine phosphatase activity [Evidence ISS]; GO:0004725 - protein tyrosine phosphatase activity [Evidence ISS] [Evidence IEA]; GO:0008138 - protein tyrosine/serine/threonine phosphatase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0016477 - cell migration [Evidence IMP]; GO:0007417 - central nervous system development [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0006917 - induction of apoptosis [Evidence IMP]; GO:0046855 - inositol phosphate dephosphorylation [Evidence ISS]; GO:0043066 - negative regulation of apoptosis [Evidence IMP]; GO:0030336 - negative regulation of cell migration [Evidence ISS]; GO:0008285 - negative regulation of cell proliferation [Evidence ISS]; GO:0051895 - negative regulation of focal adhesion formation [Evidence ISS]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0051898 - negative regulation of protein kinase B signaling cascade [Evidence IMP]; GO:0046856 - phosphoinositide dephosphorylation [Evidence ISS]; GO:0006470 - protein amino acid dephosphorylation [Evidence ISS] [Evidence IEA]; GO:0000079 - regulation of cyclin-dependent protein kinase activity [Evidence ISS]; GO:0031647 - regulation of protein stability [Evidence ISS] codon_start : 1 product : phosphatase and tensin homolog protein_id : NP_032986.1

name	B430203M17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893025 GeneID:320193 MGI:2443558
definition	codon_start : 1 product : hypothetical protein LOC320193 protein_id : NP_796070.1

name	6530404N21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270500 GeneID:67795 MGI:1915045
definition	codon_start : 1 note : overriding stop codons product : RIKEN cDNA 6530404N21 gene protein_id : XP_001481368.1 transl_except : (pos:complement(33466464..33466466),aa:OTHER)

name	LOC628236 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270428 GeneID:628236
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477755.1

name	AI747699 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625662 GeneID:381236 MGI:2147592
definition	GO_function : GO:0016789 - carboxylic ester hydrolase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004806 - triacylglycerol lipase activity [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA] codon_start : 1 product : hypothetical protein LOC381236 protein_id : NP_001013792.2

name	EG668106 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270504 GeneID:668106 MGI:3647649
definition	codon_start : 1 product : hypothetical protein protein_id : XP_999429.2

name	EG668114 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270507 GeneID:668114 MGI:3644466
definition	codon_start : 1 product : hypothetical protein protein_id : XP_999455.2

name	EG329055 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82998643 GeneID:329055 MGI:3647308
definition	codon_start : 1 product : hypothetical protein protein_id : XP_285300.5

name	Lipf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385836 CCDS:CCDS29754.1 GeneID:67717 MGI:1914967
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016789 - carboxylic ester hydrolase activity [Evidence IEA]; GO:0008289 - lipid binding [Evidence ISS]; GO:0004806 - triacylglycerol lipase activity [Evidence ISS] GO_process : GO:0006641 - triacylglycerol metabolism [Evidence ISS] codon_start : 1 product : lipase, gastric protein_id : NP_080610.1

name	Lipk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370258 GeneID:240633 MGI:2679259
definition	GO_function : GO:0016789 - carboxylic ester hydrolase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004806 - triacylglycerol lipase activity [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA] codon_start : 1 product : lipase-like, ab-hydrolase domain containing 2 protein_id : NP_766425.1

name	EG383462 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94405982 GeneID:383462 MGI:3643323
definition	codon_start : 1 product : similar to ribosomal protein L6 protein_id : XP_357078.4

name	Lipn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249208 GeneID:70166 MGI:1917416
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004771 - sterol esterase activity [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA] codon_start : 1 product : lipase-like, ab-hydrolase domain containing 4 protein_id : NP_081616.1

name	Ankrd22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:48597001 GeneID:52024 MGI:1277101
definition	codon_start : 1 product : ankyrin repeat domain 22 protein_id : NP_077166.4

name	Stambpl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55742879 CCDS:CCDS29756.1 GeneID:76630 MGI:1923880
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : AMSH-family protein protein_id : NP_083958.3

name	Acta2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671507 CCDS:CCDS29757.1 GeneID:11475 MGI:87909
definition	GO_component : GO:0005884 - actin filament [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA] codon_start : 1 note : actin, alpha, vascular smooth muscle product : actin, alpha 2, smooth muscle, aorta protein_id : NP_031418.1

name	Fas (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679751 CCDS:CCDS29758.1 GeneID:14102 MGI:95484
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence IEA] GO_process : GO:0006924 - activated T cell apoptosis [Evidence IDA]; GO:0006915 - apoptosis [Evidence IGI]; GO:0006955 - immune response [Evidence IEA]; GO:0008625 - induction of apoptosis via death domain receptors [Evidence IMP] [Evidence IGI] [Evidence IDA]; GO:0006925 - inflammatory cell apoptosis [Evidence IMP] [Evidence IDA]; GO:0045060 - negative thymic T cell selection [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006927 - transformed cell apoptosis [Evidence IDA] codon_start : 1 exception : mismatches in translation note : Fas antigen; lymphoproliferation; tumor necrosis factor receptor superfamily, member 6 product : Fas (TNF receptor superfamily member) protein_id : NP_032013.1

name	Ch25h (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6857769 CCDS:CCDS29759.1 GeneID:12642 MGI:1333869
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0008395 - steroid hydroxylase activity [Evidence IDA] GO_process : GO:0008203 - cholesterol metabolism [Evidence IDA]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA]; GO:0016126 - sterol biosynthesis [Evidence IEA] codon_start : 1 product : cholesterol 25-hydroxylase protein_id : NP_034020.1

name	LOC638381 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:638381
definition	number : 9 pseudo : _no_value

name	LOC638381 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:638381
definition	number : 8 pseudo : _no_value

name	LOC638381 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:638381
definition	number : 7 pseudo : _no_value

name	LOC638381 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:638381
definition	number : 6 pseudo : _no_value

name	LOC638381 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:638381
definition	number : 5 pseudo : _no_value

name	LOC638381 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:638381
definition	number : 4 pseudo : _no_value

name	LOC638381 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:638381
definition	number : 3 pseudo : _no_value

name	LOC638381 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:638381
definition	number : 2 pseudo : _no_value

name	LOC638381 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:638381
definition	number : 1 pseudo : _no_value

name	EG668095 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668095
definition	number : 10 pseudo : _no_value

name	EG668095 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668095
definition	number : 9 pseudo : _no_value

name	EG668095 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668095
definition	number : 8 pseudo : _no_value

name	EG668095 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668095
definition	number : 7 pseudo : _no_value

name	EG668095 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668095
definition	number : 6 pseudo : _no_value

name	EG668095 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668095
definition	number : 5 pseudo : _no_value

name	EG668095 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668095
definition	number : 4 pseudo : _no_value

name	EG668095 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668095
definition	number : 3 pseudo : _no_value

name	EG668095 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668095
definition	number : 2 pseudo : _no_value

name	EG668095 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668095
definition	number : 1 pseudo : _no_value

name	EG668112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668112
definition	number : 10 pseudo : _no_value

name	EG668112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668112
definition	number : 9 pseudo : _no_value

name	EG668112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668112
definition	number : 8 pseudo : _no_value

name	EG668112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668112
definition	number : 7 pseudo : _no_value

name	EG668112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668112
definition	number : 6 pseudo : _no_value

name	EG668112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668112
definition	number : 5 pseudo : _no_value

name	EG668112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668112
definition	number : 4 pseudo : _no_value

name	EG668112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668112
definition	number : 3 pseudo : _no_value

name	EG668112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668112
definition	number : 2 pseudo : _no_value

name	EG668112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668112
definition	number : 1 pseudo : _no_value

name	LOC668127 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668127
definition	number : 10 pseudo : _no_value

name	LOC668127 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668127
definition	number : 9 pseudo : _no_value

name	LOC668127 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668127
definition	number : 8 pseudo : _no_value

name	LOC668127 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668127
definition	number : 7 pseudo : _no_value

name	LOC668127 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668127
definition	number : 6 pseudo : _no_value

name	LOC668127 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668127
definition	number : 5 pseudo : _no_value

name	LOC668127 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668127
definition	number : 4 pseudo : _no_value

name	LOC668127 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668127
definition	number : 3 pseudo : _no_value

name	LOC668127 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668127
definition	number : 2 pseudo : _no_value

name	LOC668127 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668127
definition	number : 1 pseudo : _no_value

clone name	MSMg01-300E13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-369N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122O08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-057A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546C19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-070I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463G11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-305O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536C13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-065C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398I03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-059N04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-474J04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-434A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265D12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-361M05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-524B12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-295E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103L23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-446L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373L06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-513N21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-081I17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-452O20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-464I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382A19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-430O02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-045P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511M24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-100L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332A20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-140D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032N19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-059N04.T7 (MSMg01no059_n04.b1)	MSMg01-059N04.TJ (MSMg01no059_n04.g1)
ACC	AG286411	AG286412
length	703	704
length of high quality (start - end)	435 (47 - 481)	435 (74 - 508)
definition	CHROMAT_FILE: MSMg01no059_n04.b1 PHD_FILE: MSMg01no059_n04.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:02:25 2005	CHROMAT_FILE: MSMg01no059_n04.g1 PHD_FILE: MSMg01no059_n04.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:02:25 2005
singlet/doublet	singlet	---
BLAST hit	plural	no hit data
sequence	TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAAATGCGCGGA ATTCATTGAAGTATTCAAATCATTTAGATTGTGCAGATTTATCAAGATCA TCTTCTAAAATCAAAGGTTAACATACTCAAAAAAGCTTATCAATATGTAG GACATTATATATATATGTATATATATATACACACATATATATACATATAT ACATATATACATATATACATATATATGTGTGTGTGTGCATCTCTCTCTCT CTCTATATATATATATGTATATATATACACATACATATATATACACACAT ATATATATATATATATATATATACACACACACACACATATTCATATGTTC AAAATAACCTAATGAGGAACAAAAGACCCTGCTGCCACAACTCTTCTGTG GGACTATACATCTCCAGAAGTGATGTCAGAGTCTGGTATGACTGAGATAT GTTTGGAGCAGGAGGGAAATACAGAGTAATGATATCAAGTTCTCAATATT CCTTCCACCAGGGTCAGGCATGTTGGTCAATGCCATGCTCCTGGCTAACA TAGTTAAGTGTGACTAAAGGTAGCGTGAGATACCGTACAATGGTCGCCCT TCTTATCACAACTGAAAAATATGGATTTGATACATGTAAAACTTAAATTT ACCCCACTGCCAAGTTTTGTGTCTCCCAAATCCATATGTATTGTCCCGAA CTC	AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXCAGAATTTATTAGAGATATCTCTTAAA GGGCTGAATATTTTTCCACTTACAGAATGTTTTTTTTCTAATGGTAAATC ATAAACAGTGTCATTCACAGGAAGTGGGAGGGGAAGAAGCAAACTGAATT GAACTTAAAGAGTTCATCATCTTAACACTCCGATGACTAAACTAAGGGAA TCTTCAGAAACAAGTTCACATGTCTGACAAAGAAGAGACAATCTCTGTGA AACAGAGATTAAGAAGGAGGTAACAGTAACTATATTTGTATGTAATGTCT TTCAGCTATTGGGGCATTTGCAACAAATCAAACACTGGCAGAAAAGATTA AACTCAACATTTTATTGGCTCCAATTTATAGTGTTCAACATTCCAAAGGT ATTTCGCACCTTGCGTCTTACCTCACTCCAACGACTATCAAGGTTTGTGA TGAACTCATAGTGTTGGTATACCTATATTTGTCAAAGTTAGCTTTCTAAA GAAGAGATCTCCCAGTACAGTCTACTGTTCACTCACCCGCATCACCTCCC TTGATGGCTACCGTGAGTCACACTTCAAAGTTGGGCAGCCTGCACTTTGG CCTGGGCACTTTATCAAACATGGATGGTATCCCTTATATTTTTTGGCCTC TACC
quality values	Open. Hide. 6 8 8 6 9 9 9 17 28 27 27 25 25 24 17 19 8 8 8 19 19 30 47 47 30 29 30 30 25 21 23 11 8 8 8 8 6 6 6 8 10 8 8 8 8 11 19 25 30 33 33 33 50 33 36 31 31 39 33 26 26 12 13 9 8 8 8 10 19 20 37 37 37 33 33 33 36 36 35 35 35 35 35 42 37 37 47 47 57 50 50 50 50 50 50 50 50 50 68 68 68 68 68 68 57 57 57 57 57 50 51 50 50 50 50 68 68 68 68 68 57 57 50 50 50 50 50 50 50 50 68 57 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 47 47 47 57 57 57 68 68 68 68 57 57 57 57 57 50 50 50 50 50 50 57 57 57 57 57 50 50 50 51 51 51 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 59 68 68 68 57 57 57 57 68 57 59 57 57 59 59 68 68 68 59 59 59 59 59 59 59 59 68 68 68 68 68 68 59 59 43 43 29 29 29 43 43 52 57 57 59 59 68 68 68 68 68 68 68 68 57 57 57 59 59 54 52 52 50 48 48 48 59 59 48 48 48 57 57 48 48 48 59 59 68 68 68 57 57 57 57 54 54 54 48 57 57 57 59 57 57 57 57 57 57 43 43 44 47 59 57 59 59 59 59 59 57 46 41 32 17 17 27 32 44 57 57 59 59 59 59 57 57 57 43 43 36 36 36 39 43 43 57 48 43 43 43 43 43 43 48 48 48 48 43 41 32 28 28 32 39 25 27 18 18 23 29 34 39 40 33 32 24 20 20 29 23 32 32 14 14 19 19 14 14 14 21 22 28 33 33 30 28 28 24 20 18 18 25 26 26 23 21 19 22 17 23 23 18 21 9 9 9 15 17 37 39 37 37 37 37 37 17 12 10 12 9 11 15 17 12 17 11 11 10 10 10 11 16 17 14 12 12 13 13 10 15 19 27 28 28 28 25 25 28 32 29 25 19 17 19 14 17 19 19 28 28 28 26 26 22 18 9 9 12 9 9 11 19 15 10 8 8 8 10 10 10 9 9 9 10 12 12 14 12 12 11 11 11 13 15 10 9 9 8 8 8 8 10 10 10 8 11 8 9 9 9 12 15 14 13 18 14 10 10 8 8 8 8 8 10 13 15 12 11 11 12 11 13 15 19 14 18 22 10 12 10 8 8 8 10 11 8 8 8 8 13 8 8 9 10 10 8 8 8 8 7 8 8 11 12 11 10 9 9 9 10 8 8 8 8 8 9 10 15 11 18 18 18 12 8 8 8 8 6 7 8 9 12 8 9 10 8 8 10 10 10 9 15 14 9 9 10 8 8 8 8 6 8 8 8 8	Open. Hide. 8 8 8 8 8 8 8 8 8 9 9 14 18 33 33 42 33 33 37 37 29 29 32 32 32 39 44 47 27 23 9 9 9 9 15 11 11 11 16 14 11 19 13 13 27 27 31 36 36 50 36 36 36 33 33 39 37 34 31 17 21 10 10 10 13 12 11 9 15 19 31 31 28 31 31 36 36 36 50 50 50 57 43 42 42 47 37 42 37 42 42 47 50 50 68 68 68 68 68 68 68 68 50 50 50 50 68 50 68 68 68 68 51 68 40 40 46 46 46 48 48 46 46 46 46 46 50 50 50 50 50 68 68 68 68 68 68 68 68 50 50 50 50 47 50 57 50 50 50 50 50 68 68 68 50 50 50 50 50 50 50 50 50 50 50 50 51 50 57 57 57 57 50 51 50 50 50 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 59 57 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 59 59 59 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 68 68 68 68 68 59 59 54 42 44 42 43 43 43 43 43 57 57 57 68 68 68 59 59 59 59 57 57 54 54 54 54 54 54 54 57 59 57 57 57 54 54 54 54 54 48 48 48 59 59 59 59 57 57 57 57 57 48 59 59 47 47 48 48 47 46 43 43 43 43 43 40 39 39 36 36 36 35 31 37 41 37 37 37 37 37 37 39 39 37 37 35 35 39 39 48 48 44 43 39 37 37 37 37 37 41 39 41 41 34 32 39 39 39 41 42 41 40 43 40 40 40 43 43 41 43 43 48 43 43 43 43 43 43 43 48 48 48 48 48 53 57 57 43 43 39 39 39 57 43 48 48 48 48 48 48 48 47 46 46 41 41 39 35 30 30 30 30 30 39 33 33 33 33 33 37 39 41 39 41 31 30 37 31 31 31 47 43 30 22 18 19 10 11 6 6 6 10 10 8 8 8 8 15 10 12 20 23 33 28 28 28 33 37 46 47 39 28 28 17 15 10 13 8 8 10 16 23 34 28 27 20 28 16 15 13 22 22 22 34 32 12 11 8 8 8 12 27 19 16 12 15 12 14 24 27 30 24 24 26 16 17 10 12 10 13 14 10 9 9 9 9 9 13 25 39 39 39 30 17 16 12 12 8 17 9 9 9 9 15 8 8 8 8 13 19 11 11 12 14 13 16 17 16 22 26 22 15 15 17 15 15 17 10 10 11 17 19 32 22 15 13 12 11 9 9 9 12 13 8 8 8 12 22 23 12 10 10 10 12 12 11 9 9 11 11 16 16 20 24 20 15 15 13 13 12 12 12 10 11 10 8 8 8 10 12 11 10 9 9 9 12 13 15 14 10 10 8 8 11 11 16 16 23 10 10 9 9 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no059_n04.b1 MSMg01no059_n04.b1 CHROMAT_FILE:
MSMg01no059_n04.b1 PHD_FILE: MSMg01no059_n04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:25 2005
         (435 letters)



>mm_chr19_33552372_33553206
          Length = 835

 Score =  470 bits (243), Expect = e-137
 Identities = 383/473 (80%), Gaps = 77/473 (16%)
 Strand = Plus / Plus

                                                                       
Query: 7   tcattgaagtattca-aatcatttagattgtgcagatttatcaagatcatcttctaaaat 65
           ||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 tcattaaagtattgataatcatttagattgtgcagatttatcaagatcatcttctaaaat 235

                                                                       
Query: 66  caaaggttaacatactcaaaaaagcttatcaatatgtaggacattatatatatatgtata 125
           ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 236 caaaggttaacatactcaaaaaagcttatcaatatgtaggacat--tatatatatgtata 293

                                                                       
Query: 126 tatatatacacacatatatatacatatatacatatatacatatatacatatatatgtgtg 185
           |||||||| ||||||||||||                  |||||||||||||||||||||
Sbjct: 294 tatatatatacacatatatat------------------atatatacatatatatgtgtg 335

                                                                       
Query: 186 tgtgtgcatctctctctctctctatatatat------------atatgt-atatatatac 232
           ||||| | ||||||| | | | |||||||||            |||| | ||||| ||||
Sbjct: 336 tgtgt-c-tctctctatatatgtatatatatacacacacacacatat-tcatatacatac 392

                                                                       
Query: 233 ac------atacatatatatacacacatatata--------------------------- 259
           ||      ||| ||||||||| |||||||||||                           
Sbjct: 393 acacatatatatatatatatatacacatatatatgtgtgtgtgtgcatctctctctctct 452

                                                                       
Query: 260 -tatatatatatata--tat----acacacacacacacatattcatatgttcaaaataac 312
            ||||||||||||||  |||    ||||||||||||||| ||||||||||||||||||||
Sbjct: 453 ctatatatatatatatgtatacacacacacacacacacacattcatatgttcaaaataac 512

                                                                       
Query: 313 ctaatgaggaacaaaagaccctgctgccacaactcttctgtgggactatacatctccaga 372
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ctaatgaggaacaaaagatcctgctgccacaactcttctgtgggactatacatctccaga 572

                                                                
Query: 373 agtgatgtcagagtctggtatgactgagatatgtttggagcaggagggaaata 425
           ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 573 agtgatgtcagagtctggtatgactgagatatgtttggagcagaagggaaata 625


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 175
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space:   351876
Effective search space used:   351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information