Query= MSMg01no060_e12.b1 MSMg01no060_e12.b1 CHROMAT_FILE:
MSMg01no060_e12.b1 PHD_FILE: MSMg01no060_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:59 2005
(165 letters)
>mm_chr19_53940803_53941368
Length = 566
Score = 267 bits (138), Expect = 3e-76
Identities = 147/150 (98%), Gaps = 3/150 (2%)
Strand = Plus / Minus
Query: 18 caacctttcatgagccacctcagggagagacactttgtaatgactgatgagacactgaat 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 caacctttcatgagccacctcagggagagacactttgtaatgactgatgagacactgaat 307
Query: 78 tcatgttttaaaaaaagaaa-aaatattttcctggttgtcttcaatactatgatgcatgg 136
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tcatgtttt-aaaaaagaaataaatattttcctggttgtcttcaatactatgatgcatgg 248
Query: 137 aacacacacacaggagt-aaaaaaaatgca 165
||||||||||||||||| ||||||||||||
Sbjct: 247 aacacacacacaggagtaaaaaaaaatgca 218
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 165
Length of database: 566
Length adjustment: 8
Effective length of query: 157
Effective length of database: 558
Effective search space: 87606
Effective search space used: 87606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no060_e12.g1 MSMg01no060_e12.g1 CHROMAT_FILE:
MSMg01no060_e12.g1 PHD_FILE: MSMg01no060_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:59 2005
(360 letters)
>mm_chr19_53813317_53814074
Length = 758
Score = 594 bits (307), Expect = e-174
Identities = 351/377 (93%), Gaps = 21/377 (5%)
Strand = Plus / Plus
Query: 1 tggtattctcatcatgtttaagagcttatacaggacccagctcatgttggacaggaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tggtattctcatcatgtttaagagcttatacaggacccagctcatgttggacaggaaatg 245
Query: 61 aacttcaggcgcccagggagactgtgcaatggctgcttaacatggctgggttacattgta 120
|||||||||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 246 aacttcaggcacccagagagactgtgc-atggctgcttaacatggctggtttacattgta 304
Query: 121 aaaaacgaacctgttgccgtttaagtggccgaagaacattcttaactttacagagtttaa 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aaaaacgaacctgttgccatttaagtggccgaagaacattcttaactttacagagtttaa 364
Query: 181 tctgcagttgataaggttttctctttttttttt-----------------ccttcttaag 223
||||||||||||| |||||||| |||||||||| ||||||||||
Sbjct: 365 tctgcagttgata-ggttttctttttttttttttttttttttttttttttccttcttaag 423
Query: 224 agagtgatctattcggtatgacttatttggagtagtgtgaaggaaatggtttttaattaa 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 424 agagtgatctattcggtatgacttatttggagtagtgtgaaggaaatggtttttaat--a 481
Query: 284 aaaaaaaactggaattgtggtacaaatctagtctacaacagtgatcttctgaggtaaata 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aaaaaaaactggaattgtggtacaaatctagtctacaacagtgatcttctgaggtaaata 541
Query: 344 atctcagatgtagatca 360
|||||||||||||||||
Sbjct: 542 atctcagatgtagatca 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 758
Length adjustment: 9
Effective length of query: 351
Effective length of database: 749
Effective search space: 262899
Effective search space used: 262899
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
