Query= MSMg01no066_b10.b1 MSMg01no066_b10.b1 CHROMAT_FILE:
MSMg01no066_b10.b1 PHD_FILE: MSMg01no066_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:46 2005
(488 letters)
>mm_chr19_8270823_8271710
Length = 888
Score = 859 bits (444), Expect = 0.0
Identities = 477/488 (97%)
Strand = Plus / Minus
Query: 1 tttacagtacattggttaatatagtgccctaatatcaggttatagtctggtctggggaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tttacagtacattggttaatatagtgccctaatatcaggttatagtctggtctggggaac 445
Query: 61 agtattcaggttctgagtacacaacacacaagatgaattcaaacaggatctctttcctta 120
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 444 agtattcaggttctgagtacacaacacacaagatgaatcccaacaggatctctttcctta 385
Query: 121 cctcgttttaaaaagacttagcaattactaccacagggtcatcaatataggaatatttga 180
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctccttttaaaaagacttaacaattactaccacagggtcatcaatataggaatatttga 325
Query: 181 tcagaagtgactctacaaggtgaccacagacttaatacataaagacaaacttatacagag 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 324 tcagaagtgactctacaaggtgaccacagacttactacataaagacaaacttatacagag 265
Query: 241 aactactaacgactcacgtgccacacatttcttttcatccacacagcctgttagtattat 300
|||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 264 aactacaaacgactcacgtgccacacatttcttttcatccacacaacctgtcagtattat 205
Query: 301 tgtgtgtcaggagccatctaggaaaaactaagggtagcagatgtccttcctagagttggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 204 tgtgtgtcaggagccatctaggaaaaactaagggtagcagatgtccttcctagaggtggt 145
Query: 361 ccacttttttgcatggactaaggtgggtaatctctgagaggcaagtcaaagagactttat 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tcacttttttgcatggactaaggtgggtaatctctgagaggcaagtcaaagagactttat 85
Query: 421 ctccggattgcttcttgcagctggtattccattcctatcattatgaaattaatttaacaa 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 84 ctccggattgcttcttgcagctgttattccattcctatcattatgaaattaatttaacaa 25
Query: 481 tccctagg 488
||||||||
Sbjct: 24 tccctagg 17
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space: 419684
Effective search space used: 419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_b10.g1 MSMg01no066_b10.g1 CHROMAT_FILE:
MSMg01no066_b10.g1 PHD_FILE: MSMg01no066_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:46 2005
(414 letters)
>mm_chr19_7861117_7861930
Length = 814
Score = 801 bits (414), Expect = 0.0
Identities = 414/414 (100%)
Strand = Plus / Plus
Query: 1 caattttttgagtttttttcctctaacttgattgtagtgaatgttttaacatttttttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caattttttgagtttttttcctctaacttgattgtagtgaatgttttaacatttttttaa 260
Query: 61 gttaaaaatattttagtaattattcagacttccatacattgtgtttggatgacattttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttaaaaatattttagtaattattcagacttccatacattgtgtttggatgacattttcc 320
Query: 121 cctaaattctttctcataatgttacttttacattcttactaccaaaggttcattttcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctaaattctttctcataatgttacttttacattcttactaccaaaggttcattttcatt 380
Query: 181 taaaatagatatttttcatttaatatatattgattaaaatgtaccctccttgaacctctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaatagatatttttcatttaatatatattgattaaaatgtaccctccttgaacctctc 440
Query: 241 ccagttcttccccatattccctactatgtggatctccaacatttctccctttcactagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagttcttccccatattccctactatgtggatctccaacatttctccctttcactagaa 500
Query: 301 aacaaacagacatctaaggaataataataaatcaaggtaagatgaaataaaagctggtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacaaacagacatctaaggaataataataaatcaaggtaagatgaaataaaagctggtca 560
Query: 361 gcatttgactaaacaaacaacagagaaataaaaagccaattcggaaagaacaag 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcatttgactaaacaaacaacagagaaataaaaagccaattcggaaagaacaag 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
