CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCTTAAGGATGTCACTTTGTTATTGTTCCCAAATTAATATATAATTTTA
TTTATAACATAATTCATAAGAGGTCATGCGAACTTTTCATCAATTGTTTC
TCAACATCACCATGTTCACATTTAATGCTAATATCTAGAGAAGTTGACAA
ACAGAACAGTATGTGATGCTTGTCTATCTAAAGCATTTACATACTCCAAG
AGTGGGCTTTCACAGTATGCAGCCCATATGCTATATTCCTAGGTAAGATA
ACCATACACCCATACATCACATGTGTCAGTAAAGTTTGAGCAATGAAAGG
GAGTCCTATCAATAAAAATGTCAAGACATTAAGCAGAAACTCAGGTTCTC
TTAGGAAACATGAAGCATATACTACGTATTCTTATGGCCAAAGCTTAAGT
CACACATAGCATTGATATGTCAATTTCTGAGGTTTCAGTGACTCTACCAG
AAGTGTCCAACCTACAGCCTATAGATCACATGAACCTTAGGAGAGCTATG
AGTTTCCCCAACACAAAATTCTAAATGTACTTAGGATGCTATGGAATCCT
TTGTGATTTTTTTTTTTTGTAAGCAGATTGTAAGCTTCTTGGGTATGAAC
TTTGTAGATGGCATTGCTGTGCCCCACCACAATACCAAAATACTTATTAG
AATGGGAATGTAGAT

GATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCCGGCCAATGCACCAAATGAAAGATTCTC
AAATTCCCGGCCAATGCACCAAATGAAAGACCCCCGAAGGGAGACCCTTA
CTCAGACACTCAAGTCCCGGGACAGCCGCGTACCCAAGAAGACACTGAGA
CCATACATAAAATGTAGAAGGTAAGATTTAATAGAGTAGCAACATGAAAG
CACACAGACCAGAGCTCTGGGGTCGAAATAAAGCAGCAACATGAAAGCAC
ACAGAGCTCTGGGGTCGAAACTCATACACCTTAGCACAGGGTAGAGGAGT
CTCGACGAAGACTTAAATTTTTCACAAGCTTTTAAAGGAAAAAACCACAA
ACTGGGAGGGGGAATGGGGAGGGAATAGGGGAAGTTTCTCTCTTTCTTTT
TATTTCTTTTTATTAAATACTTTACTTTCATTTAATAAATAATTTGTTAT
TCCGTTGATCACTATTCTTTTGCTCCTGTTTTTTTATTCTCTTGTTCGCA
GTTGTCTTTCCTTCCTTCCTTCTGTCGCCGTTTTCTACTTATTATTTGTT
CGTCTTTTTAACTCAATTCGTATCATTTACCGATATTTCTACTCTTATTC
CTTATTTCGTTTTTATTTCCTTCTTCTTCTTTTTTGCTCTTCCTTTTTAT
TTATTTCTTCTTCTTTCTGCTCTCTATTTTCGCCAG

Query= MSMg01no066_n13.b1 MSMg01no066_n13.b1 CHROMAT_FILE:
MSMg01no066_n13.b1 PHD_FILE: MSMg01no066_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:47 2005
         (567 letters)



>mm_chr19_20311759_20312725
          Length = 967

 Score =  992 bits (513), Expect = 0.0
 Identities = 547/563 (97%), Gaps = 8/563 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccttaaggatgtcactttgttattgttcccaaattaatatataattttatttata 64
           ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 909 gaattccttaaggatgtaactttgttattattcccaaattaatatataattttatttata 850

                                                                       
Query: 65  acataattcataagaggtcatgcgaacttttcatcaattgtttctcaacatcaccatgtt 124
           ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 849 acataattcctaagaggtcatgcgaatttttcatcaattgtttctcaacatcaccatgtt 790

                                                                       
Query: 125 cacatttaatgctaatatctagagaagttgacaaacagaacagtatgtgatgcttgtcta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 cacatttaatgctaatatctagagaagttgacaaacagaacagtatgtgatgcttgtcta 730

                                                                       
Query: 185 tctaaagcatttacatactccaagagtgggctttcacagtatgcagcccatatgctatat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tctaaagcatttacatactccaagagtgggctttcacagtatgcagcccatatgctatat 670

                                                                       
Query: 245 tcctaggtaagataaccatacacccatacatcacatgtgtcagtaaagtttgagcaatga 304
           |||||||||||||||        ||||||||||| | |||||||||||||||||||||||
Sbjct: 669 tcctaggtaagataa--------ccatacatcacctatgtcagtaaagtttgagcaatga 618

                                                                       
Query: 305 aagggagtcctatcaataaaaatgtcaagacattaagcagaaactcaggttctcttagga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aagggagtcctatcaataaaaatgtcaagacattaagcagaaactcaggttctcttagga 558

                                                                       
Query: 365 aacatgaagcatatactacgtattcttatggccaaagcttaagtcacacatagcattgat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aacatgaagcatatactacgtattcttatggccaaagcttaagtcacacatagcattgat 498

                                                                       
Query: 425 atgtcaatttctgaggtttcagtgactctaccagaagtgtccaacctacagcctatagat 484
           |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 497 atgtcaatttctgaggtttcggtgactctaccagaagtgtccaacctacagcttatagat 438

                                                                       
Query: 485 cacatgaaccttaggagagctatgagtttccccaacacaaaattctaaatgtacttagga 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cacatgaaccttaggagagctatgagtttccccaacacaaaattctaaatgtacttagga 378

                                  
Query: 545 tgctatggaatcctttgtgattt 567
           |||||||||||||||||||||||
Sbjct: 377 tgctatggaatcctttgtgattt 355


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space:   533049
Effective search space used:   533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)