Query= MSMg01no067_m23.b1 MSMg01no067_m23.b1 CHROMAT_FILE:
MSMg01no067_m23.b1 PHD_FILE: MSMg01no067_m23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:01 2005
(296 letters)
>mm_chr19_28349203_28349898
Length = 696
Score = 536 bits (277), Expect = e-157
Identities = 289/293 (98%)
Strand = Plus / Minus
Query: 1 gtgagtggcaatctgcactatgtggattttagctggaattttcttttgtgtgtgccataa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 493 gtgagtggcaatctgcactatgtggattttagctggaattttcttttgtgtgtgtgataa 434
Query: 61 acaattcgtagtttagaataaatatgtagagagctatggctagagaccccttcaagttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 acaattcgtagtttagaataaatatgtagagagctatggctagagaccccttcaagttaa 374
Query: 121 caaatgagaacacacaaatggggaatctgagttactggtagtgaggtcactgtgtcgata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 caaatgagaacacacaaatggggaatctgagttactggtagtgaggtcactgtgtcgata 314
Query: 181 aaatcgaggagcaggcgctttcgtcctgtacatggcgtggccagcctctttcccaccccc 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 313 aaatcgaggagcaggcgctttcatcctgtacatggcgtggccagcctctttcccaccccc 254
Query: 241 agtttggctcatttctgttcagcactgcattacaaaaccatcctagttgctgt 293
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 253 agtttggctcatttctgctcagcactgcattacaaaaccatcctagttgctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no067_m23.g1 MSMg01no067_m23.g1 CHROMAT_FILE:
MSMg01no067_m23.g1 PHD_FILE: MSMg01no067_m23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:01 2005
(286 letters)
>mm_chr19_28192786_28193472
Length = 687
Score = 509 bits (263), Expect = e-148
Identities = 281/287 (97%), Gaps = 1/287 (0%)
Strand = Plus / Plus
Query: 1 taggaaa-tgtaagcttcttgtaggggcagcagaaaataaaacacgtagatcagtatttt 59
||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 taggaaaatgtaagcttcttgtaggggcagcagaaaataaaacacgtagatgagtatttt 260
Query: 60 cagtgatttaatgaagaacacaggaattaaacagcttagatgccaaatgacattctttcc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtgatttaatgaagaacacaggaattaaacagcttagatgccaaatgacattctttcc 320
Query: 120 agagtcgagccctcttgaacaggctccaaggcagggataacaacaaagtctacttcctcc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagtcgagccctcttgaacaggctccaaggcagggataacaacaaagtctacttcctcc 380
Query: 180 ttctccttctctgagataaactttcatttccccaggcagccaagaacagttgcttaaaga 239
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 ttctccttttctgagataaactttcatttccccaggcagccaggaacagttgcttaaaga 440
Query: 240 gaatttattcacccgtcaaatagcacctgcgcagctatctccagatg 286
||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 441 gaatttattcacccggcaaatagcacctgtgcagctatctccagatg 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 687
Length adjustment: 9
Effective length of query: 277
Effective length of database: 678
Effective search space: 187806
Effective search space used: 187806
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
