Query= MSMg01no080_b18.b1 MSMg01no080_b18.b1 CHROMAT_FILE:
MSMg01no080_b18.b1 PHD_FILE: MSMg01no080_b18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:55 2005
(362 letters)
>mm_chr19_10091464_10092225
Length = 762
Score = 611 bits (316), Expect = e-179
Identities = 349/364 (95%), Gaps = 9/364 (2%)
Strand = Plus / Plus
Query: 4 ggaattccataattccg-caa----gtggttgtagtcactgagggagctgaggagaaagt 58
|||||||||||| | ||| ||||| |||||||||||||||||||||||||||||
Sbjct: 203 ggaattccataa----gccaagcgtgtggtcgtagtcactgagggagctgaggagaaagt 258
Query: 59 attagttcagcccggaatctggagaccaatctaggtggtacatgaccaacaccctcagag 118
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 attagttcagcccagaagctggagaccaatctaggtggtacatgaccaacaccctcagag 318
Query: 119 aagaggggtctaagggaaaggagagagggaggctggggttccagcctggagaatttcttc 178
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aagagggggctaagggaaaggagagagggaggctggggttccagcctggagaatttcttc 378
Query: 179 gtttcacctggtccttagcagttcagaaggggcggctgttgtgtagatggatgagtgaaa 238
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gtttcacgtggtccttagcagttcagaaggggcggctgttgtgtagatggatgagtgaaa 438
Query: 239 tgtgttcttacaagtccagggagcactgtagacgctgcctgtgggagctggtctagcagt 298
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tgtgttcttacaagcccagggagcactgtagacgctgcctgtgggagctggtctagcagt 498
Query: 299 actcaaggagaggttgactatgggctctacttattggatcctgatctgaggctgaacttc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 actcaaggagaggttgactatgggctctacttattggatcctgatctgaggctgaacttc 558
Query: 359 attc 362
||||
Sbjct: 559 attc 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 762
Length adjustment: 9
Effective length of query: 353
Effective length of database: 753
Effective search space: 265809
Effective search space used: 265809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_b18.g1 MSMg01no080_b18.g1 CHROMAT_FILE:
MSMg01no080_b18.g1 PHD_FILE: MSMg01no080_b18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:55 2005
(300 letters)
>mm_chr19_10250763_10251463
Length = 701
Score = 201 bits (104), Expect = 4e-56
Identities = 107/108 (99%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 1 tcttcctta-catttattcttctgtgtagttttggaaggctcttcagatctagggtcctg 59
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tcttccttaccatttattcttctgtgtagttttggaaggctcttcagatctagggtcctg 246
Query: 60 tagggcaagcaccatctccagctgtgattccctttcattgtcttcttt 107
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tagggcaagcaccatctccagctgtgattccctttcattgtcttcttt 198
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 701
Length adjustment: 9
Effective length of query: 291
Effective length of database: 692
Effective search space: 201372
Effective search space used: 201372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
