Query= MSMg01no082_h08.b1 MSMg01no082_h08.b1 CHROMAT_FILE:
MSMg01no082_h08.b1 PHD_FILE: MSMg01no082_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:55 2005
(103 letters)
>mm_chr19_57192908_57193410
Length = 503
Score = 194 bits (100), Expect = 2e-54
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 4 taatagaagaagtgtctgtcgctaccatgaaccgacaacatgtagaggttcccagcgact 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 taatagaagaagtgtctgtcgctaccatgaaccgacaacatgtagaggttcccagcgact 263
Query: 64 ccctggcttgcccaccggagagccagcaaatgcctccaag 103
||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccctggcttgcccaccggagagccagcaaatgcctccaag 303
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 103
Length of database: 503
Length adjustment: 8
Effective length of query: 95
Effective length of database: 495
Effective search space: 47025
Effective search space used: 47025
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no082_h08.g1 MSMg01no082_h08.g1 CHROMAT_FILE:
MSMg01no082_h08.g1 PHD_FILE: MSMg01no082_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:55 2005
(241 letters)
>mm_chr19_57362817_57363458
Length = 642
Score = 424 bits (219), Expect = e-123
Identities = 234/239 (97%), Gaps = 1/239 (0%)
Strand = Plus / Minus
Query: 1 aggaaaaccttggttctcctgtgatttgaaacttgaacctgaacccaggtgcttcggtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aggaaaaccttggttctcctgtgatttgaaacttgaacctgaacccaggtgcttcggtgc 380
Query: 61 ctcttcccc-tagggaaccatcccataatgagacctatggtgtgatcctgagagaattac 119
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 379 ctcttccccttagggaaccatcccataatgagacctatggtgtgaccctgagagaattac 320
Query: 120 agtccctcttgaaacttcagctgctagatccaaaagatggctcttggtctcccaaaaagg 179
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 319 agtccctcttgaaacttcagctgctagatccaaaagatggctcttggtcccccaaaaagg 260
Query: 180 caaatttacagttgctagaaaggctgtacccctgttaccctaatctctcatctcctgtg 238
|||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 259 caaatttacagttgctagtaaggctgtacccctgttaccctcatctctcatctcctgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 642
Length adjustment: 9
Effective length of query: 232
Effective length of database: 633
Effective search space: 146856
Effective search space used: 146856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
