Query= MSMg01no083_e14.b1 MSMg01no083_e14.b1 CHROMAT_FILE:
MSMg01no083_e14.b1 PHD_FILE: MSMg01no083_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:58 2005
(402 letters)
>mm_chr19_31522524_31523324
Length = 801
Score = 735 bits (380), Expect = 0.0
Identities = 392/396 (98%), Gaps = 1/396 (0%)
Strand = Plus / Plus
Query: 7 attcaccgaatctcgctaacaatgctatagccaaagaactgctttctgtccctggttttg 66
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 attcaccgaatct-gctaacaatgctatagccaaagaactgctttctgtccctggttttg 265
Query: 67 gcttagtggtttgttttgaacatcccactgttctattgggccgtaaagttatactactca 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gcttagtggtttgttttgaacatcccactgttctattgggccgtaaagttatactactca 325
Query: 127 atatgaacaattgaagtattggtcttacaaacgtgcccatcccagctccttcatgactca 186
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 326 ttatgaacaattgaagtattggtcttacaaacgtgcccgtcccagctccttcatgactca 385
Query: 187 atttgcaaatggaaaatggggacaaaatacaaatgtaatgttaaacaggaaacagattaa 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atttgcaaatggaaaatggggacaaaatacaaatgtaatgttaaacaggaaacagattaa 445
Query: 247 gaaaagcatcaaaagccaggggtgatgatgtacctaggcttgtattcaggataaaaataa 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gaaaagcatcaaaagccaggggtgatgatgtacctaggcttgtattcaggataaaaataa 505
Query: 307 aacacattgtaaattcatgggagacccaaaagcagtaccacgagaagtctgtcactataa 366
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 506 aacacattgtaaattcatgggagtcccaaaagcagtaccacgagaagtctgtcactataa 565
Query: 367 acacctccaccaaaaataggggagggggatgaggtg 402
||||||||||||||||||||||||||||||||||||
Sbjct: 566 acacctccaccaaaaataggggagggggatgaggtg 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 801
Length adjustment: 9
Effective length of query: 393
Effective length of database: 792
Effective search space: 311256
Effective search space used: 311256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_e14.g1 MSMg01no083_e14.g1 CHROMAT_FILE:
MSMg01no083_e14.g1 PHD_FILE: MSMg01no083_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:58 2005
(244 letters)
>mm_chr19_31716003_31716646
Length = 644
Score = 472 bits (244), Expect = e-138
Identities = 244/244 (100%)
Strand = Plus / Minus
Query: 1 tttgatagcagccaaacatgcttggctttgttgcttttggtcaaactcctgtgtcacaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttgatagcagccaaacatgcttggctttgttgcttttggtcaaactcctgtgtcacaac 385
Query: 61 tataagatacccaagggagcacatttccagtcagagacttatttactctgtgccttagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tataagatacccaagggagcacatttccagtcagagacttatttactctgtgccttagca 325
Query: 121 ctttgcaggtttatacctgggcccaacaatacacacaggtgtcagatacattttaagaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctttgcaggtttatacctgggcccaacaatacacacaggtgtcagatacattttaagaac 265
Query: 181 tcaaaaccttgggacattttatatttgaagtagaaactggatcctgtgctttactaaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcaaaaccttgggacattttatatttgaagtagaaactggatcctgtgctttactaaagg 205
Query: 241 caag 244
||||
Sbjct: 204 caag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
