Query= MSMg01no086_o11.b1 MSMg01no086_o11.b1 CHROMAT_FILE:
MSMg01no086_o11.b1 PHD_FILE: MSMg01no086_o11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:49 2005
(596 letters)
>mm_chr19_58837919_58838915
Length = 997
Score = 1077 bits (557), Expect = 0.0
Identities = 584/593 (98%), Gaps = 1/593 (0%)
Strand = Plus / Minus
Query: 5 gaattctgtctacttacctttctacgttctggactggtctgtggatttcctaaagcagat 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 gaattctgtctacttagttttctacgttctggactggtctgtggatttcctaaagcagat 738
Query: 65 actatgtccatcatttttcaaagagaggcagggatgagaaaaatgtgaaatgtctgtcca 124
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 actatgcccatcatttttcaaagagaggcagggatgagaaaaatgtgaaatgtctgtcca 678
Query: 125 tctactctcatccagagagtgaggataagccatccatctttcaggcttatgaaagtccca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tctactctcatccagagagtgaggataagccatccatctttcaggcttatgaaagtccca 618
Query: 185 cgaacggatgtaacagacagtcctctgcgaactgaaaatgtctacaggactataaatact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 cgaacggatgtaacagacagtcctctgcgaactgaaaatgtctacaggactataaatact 558
Query: 245 attcctatccttcaagccaccagagaggggtatggttacatattggtttgactgcacaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 attcctatccttcaagccaccagagaggggtatggttacatattggtttgactgcacaaa 498
Query: 305 gtgaatagctgtttgggtatgcttttatgggcattagctgtttctaatgattccttcatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 497 gtgaatagctgtttgggtatgcttttatgggcattagctgtttctaatgattctttcatt 438
Query: 365 caccaggcacttcttaaaggataagtctctttctggctgtgacaaactgagctaaaacat 424
||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 437 caccaggcacttcctaaatgataagtctctttctggctgtgccaaactgagctaaaacat 378
Query: 425 tcaaaa-gtagaactgataaatttgggtttttaaaaatcataccatttaaaaacaaacaa 483
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tcaaaaagtagaactgataaatttgggtttttaaaaatcataccatttaaaaacaaacaa 318
Query: 484 aaataactttgttacattacagcagtaatgtctctgaagttagggttctgaatctggtta 543
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 317 aaataactttgttacattacagtagtaatgtctctgaagttagggttctgaatctggtta 258
Query: 544 tatttttcttgttttacaaacacatttttatctatgactatggattttctagc 596
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tatttttcttgttttacaaacacatttttatctatgactatggattttctagc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 997
Length adjustment: 10
Effective length of query: 586
Effective length of database: 987
Effective search space: 578382
Effective search space used: 578382
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no086_o11.g1 MSMg01no086_o11.g1 CHROMAT_FILE:
MSMg01no086_o11.g1 PHD_FILE: MSMg01no086_o11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:49 2005
(584 letters)
>mm_chr19_58699582_58700565
Length = 984
Score = 1106 bits (572), Expect = 0.0
Identities = 581/584 (99%)
Strand = Plus / Plus
Query: 1 atttctctctcatagatcctcttgccaagagattttgtaaatctttacattccggagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttctctctcatagatcctcttgccaagagattttgtaaatctttacattccggagatt 260
Query: 61 gggtaataaaaatgacaggtgtgctttgtgtcatgccttgttgtgtcttttccccccaaa 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 gggtaataaaaatgacaggtgtgctttgtgtcatgccttgttgtatcttttccccccaaa 320
Query: 121 actcatgcttcgattacaatcccagatggagtctttattttatgcatgctttgcctgtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actcatgcttcgattacaatcccagatggagtctttattttatgcatgctttgcctgtta 380
Query: 181 ctcagcagtgactagatcttattccaataaaggatattcaaagtccgtacaagactgagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcagcagtgactagatcttattccaataaaggatattcaaagtccgtacaagactgagc 440
Query: 241 caaacatttttggcaatttctttttctttacatggttggagttttgcatttagccttcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaacatttttggcaatttctttttctttacatggttggagttttgcatttagccttcac 500
Query: 301 atagcgatccatttgtctttttcttttgcaggctttaaaaaaaaatctacttatttaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atagcgatccatttgtctttttcttttgcaggctttaaaaaaaaatctacttatttaata 560
Query: 361 atcagtactaagcatgctaagtaatgaggttctatgaaaacaggatgcgggccctgtgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atcagtactaagcatgctaagtaatgaggttctatgaaaacaggatgcgggccctgtgct 620
Query: 421 tggggtccgagactatgactcagatgtagtagaggcagacatggggtgaggggagcgcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggggtccgagactatgactcagatgtagtagaggcagacatggggtgaggggagcgcta 680
Query: 481 tcgagaaccagccactacactctcctaaaaccttcaccccgaaaccaatgatcccttagg 540
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 681 tcgagaaccagccactacactctcctaaaaccttcaccccgaacccactgatcccttagg 740
Query: 541 gatgtcatgaatgaagacagagaaacaaatatgttttcatttac 584
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gatgtcatgaatgaagacagagaaacaaatatgttttcatttac 784
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
