Query= MSMg01no089_o14.b1 MSMg01no089_o14.b1 CHROMAT_FILE:
MSMg01no089_o14.b1 PHD_FILE: MSMg01no089_o14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:53 2005
(510 letters)
>mm_chr19_25314883_25315793
Length = 911
Score = 948 bits (490), Expect = 0.0
Identities = 503/508 (99%), Gaps = 3/508 (0%)
Strand = Plus / Plus
Query: 5 ggaattcagtgg--atttccccttatgggaaagcttgtgagtaaggtgatagcctttaac 62
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcagtggaaattt-cccttatgggaaagcttgtgagtaaggtgatagcctttaac 263
Query: 63 tttggtaaataataattatatttctttctatgacatgcagagttctggtggaggaaccct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttggtaaataataattatatttctttctatgacatgcagagttctggtggaggaaccct 323
Query: 123 gagctcctagcaaggagaaggaactgaggtactgagccagaataggaagcaggggtcaaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gagctcctagcaaggagaaggaactgaggtactgagccagaataggaagcaggggtcaaa 383
Query: 183 cctgcctgcagtaggccccagtggctcattctcagaggtagtcactgaactaggagtagg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctgcctgcagtaggccccagtggctcattctcagaggtagtcactgaactaggagtagg 443
Query: 243 tagcagagatctgggggacaggcaaggggttgactatatgttgagaaccagaaactcaag 302
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tagcagagatctggggtacaggcaaggggttgactatatgttgagaaccagaaactcaag 503
Query: 303 taggcaaggccatagaagttagataccagcattgctggacatgggatgtttgaatggccg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taggcaaggccatagaagttagataccagcattgctggacatgggatgtttgaatggccg 563
Query: 363 tttgagatcgccccctttgtccatagacttgtgactatgaatactgttgttctgagccca 422
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 564 tttgagatcgccccctttgtccatagacttgtgactgtgaatactgttgttctgagccca 623
Query: 423 gatcccctgattggaatgtaggatctgtagcttgctctgtgagttttggtgagttactga 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gatcccctgattggaatgtaggatctgtagcttgctctgtgagttttggtgagttactga 683
Query: 483 actgctctttgcttcccttgccctgctg 510
||||||||||||||||||||||||||||
Sbjct: 684 actgctctttgcttcccttgccctgctg 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 911
Length adjustment: 10
Effective length of query: 500
Effective length of database: 901
Effective search space: 450500
Effective search space used: 450500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no089_o14.g1 MSMg01no089_o14.g1 CHROMAT_FILE:
MSMg01no089_o14.g1 PHD_FILE: MSMg01no089_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:53 2005
(249 letters)
>mm_chr19_25397157_25397807
Length = 651
Score = 435 bits (225), Expect = e-126
Identities = 244/251 (97%), Gaps = 2/251 (0%)
Strand = Plus / Minus
Query: 1 cggtaaaatagaaacaagaaacaaaaagagccatttctctagcgaaatgagccaagtgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 cggtaaaatagaaacaagaaacaaaaagagccatttctctagcgaaatgagccaagtgcc 392
Query: 61 tggatagaaaaatctacaaaagaacaaacatgaatacataagaaagagttcctatgtcca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 391 tggatagaaaaatctacaaaagaacaaacatgaatacataagaaagagttcctatgtcta 332
Query: 121 taaagaactccatgcgtttctttgttgttgctttaatctcatacatttcttgggaggggt 180
|||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 331 taaaaaactccatgcgtttctttgttattgctttaatctcatgcatttcttgggaggggt 272
Query: 181 gtatgtgtggtgtggcaca--tgtgtggctatcagagcccgtgtgacggtcagaacttgc 238
||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 271 gtatgtgtggtgtggcacatgtgtgtggctatcagagcccgtgtgatggtcagaacttgc 212
Query: 239 aggagatggtt 249
|||||||||||
Sbjct: 211 aggagatggtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 651
Length adjustment: 9
Effective length of query: 240
Effective length of database: 642
Effective search space: 154080
Effective search space used: 154080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
