MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-093G06
Chromosome	19 (Build37)
Map Location	36,704,232 - 36,704,372
singlet/doublet	singlet
Overlap gene	none
Upstream gene	A830019P07Rik, Htr7, Rpp30, Ankrd1, LOC668195, Pcgf5, LOC668201, Hectd2
Downstream gene	LOC668215, Ppp1r3c, Tnks2, Fgfbp3, Btaf1, Cpeb3, March5, LOC668230, Ide, LOC100043010, Kif11, EG667490, LOC631069, Hhex, Exoc6
Link	Open Mouse BAC browser

Click to get alignment info.

name	A830019P07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329056 MGI:3028035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Htr7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15566 MGI:99841
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpp30 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54364 MGI:1859683
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ankrd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107765 MGI:1097717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668195 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668195
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Pcgf5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76073 MGI:1923505
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668201 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668201
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Hectd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226098 MGI:2442663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668215 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668215
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Ppp1r3c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53412 MGI:1858229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tnks2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74493 MGI:1921743
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 232 ESTs, 4 Proteins

name	Fgfbp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72514 MGI:1919764
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Btaf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107182 MGI:2147538
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpeb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208922 MGI:2443075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	March5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69104 MGI:1915207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668230 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668230
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ide (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15925 MGI:96412
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043010 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 503 ESTs, 10 Proteins pseudo : _no_value

name	Kif11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16551 MGI:1098231
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667490 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667490 MGI:3648745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins pseudo : _no_value

name	LOC631069 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:631069
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 103 ESTs, 6 Proteins pseudo : _no_value

name	Hhex (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15242 MGI:96086
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Exoc6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107371 MGI:1351611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Htr7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865997 GeneID:15566 MGI:99841
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-hydroxytryptamine (serotonin) receptor 7 transcript_id : NM_008315.2

name	Rpp30 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476124 GeneID:54364 MGI:1859683
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribonuclease P/MRP 30 subunit (human) transcript_id : NM_019428.2

name	Ankrd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893293 GeneID:107765 MGI:1097717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat domain 1 (cardiac muscle) transcript_id : NM_013468.3

name	Pcgf5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802911 GeneID:76073 MGI:1923505
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polycomb group ring finger 5 transcript_id : NM_029508.2

name	Hectd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376710 GeneID:226098 MGI:2442663
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HECT domain containing 2 transcript_id : NM_172637.2

name	LOC668215 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94405987 GeneID:668215
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical LOC668215 transcript_id : XM_001000061.1

name	Ppp1r3c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33468956 GeneID:53412 MGI:1858229
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 1, regulatory (inhibitor) subunit 3C transcript_id : NM_016854.1

name	Tnks2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270443 GeneID:74493 MGI:1921743
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 232 ESTs, 4 Proteins product : tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 transcript_id : XM_001000101.2

name	Fgfbp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859717 GeneID:72514 MGI:1919764
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibroblast growth factor binding protein 3 transcript_id : NM_028263.1

name	Btaf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123858773 GeneID:107182 MGI:2147538
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae) transcript_id : NM_001080706.1

name	Cpeb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370379 GeneID:208922 MGI:2443075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytoplasmic polyadenylation element binding protein 3 transcript_id : NM_198300.2

name	March5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42734464 GeneID:69104 MGI:1915207
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : membrane-associated ring finger (C3HC4) 5 transcript_id : NM_027314.2

name	Ide (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121583921 GeneID:15925 MGI:96412
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin degrading enzyme transcript_id : NM_031156.2

name	Kif11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45476576 GeneID:16551 MGI:1098231
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kinesin family member 11 transcript_id : NM_010615.1

name	Hhex (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802813 GeneID:15242 MGI:96086
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hematopoietically expressed homeobox transcript_id : NM_008245.3

name	Exoc6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62526125 GeneID:107371 MGI:1351611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : exocyst complex component 6 transcript_id : NM_175353.2

name	Htr7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865998 CCDS:CCDS29769.1 GeneID:15566 MGI:99841
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004977 - melanocortin receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : 5-hydroxytryptamine (serotonin) receptor 7 protein_id : NP_032341.2

name	Rpp30 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42476125 CCDS:CCDS29770.1 GeneID:54364 MGI:1859683
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0004526 - ribonuclease P activity [Evidence IEA] GO_process : GO:0008033 - tRNA processing [Evidence IEA] codon_start : 1 exception : mismatches in translation note : RNaseP protein p30; ribonuclease P2 product : ribonuclease P/MRP 30kDa subunit protein_id : NP_062301.2

name	Ankrd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560506 CCDS:CCDS29771.1 GeneID:107765 MGI:1097717
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003714 - transcription corepressor activity [Evidence IDA] GO_process : GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA] codon_start : 1 note : ankyrin-like repeat protein; cardiac responsive adriamycin protein product : ankyrin repeat domain 1 (cardiac muscle) protein_id : NP_038496.2

name	Pcgf5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313116 CCDS:CCDS29772.1 GeneID:76073 MGI:1923505
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : polycomb group ring finger 5 protein_id : NP_083784.1

name	Hectd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369920 CCDS:CCDS29773.1 GeneID:226098 MGI:2442663
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006464 - protein modification [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation product : HECT domain containing 2 protein_id : NP_766225.1

name	LOC668215 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94405988 GeneID:668215
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001000061.1

name	Ppp1r3c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468957 GeneID:53412 MGI:1858229
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005515 - protein binding [Evidence TAS]; GO:0008599 - protein phosphatase type 1 regulator activity [Evidence IEA] GO_process : GO:0005978 - glycogen biosynthesis [Evidence IMP]; GO:0005977 - glycogen metabolism [Evidence IDA]; GO:0006605 - protein targeting [Evidence TAS] codon_start : 1 note : protein phosphatase 1 binding protein PTG; protein targeting to glicogen; protein phosphatase 1, regulatory (inhibitor) subunit 5 product : protein phosphatase 1, regulatory (inhibitor) subunit 3C protein_id : NP_058550.1

name	Tnks2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270444 GeneID:74493 MGI:1921743
definition	codon_start : 1 product : tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 protein_id : XP_001000101.2

name	Fgfbp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:139948267 CCDS:CCDS29774.1 GeneID:72514 MGI:1919764
definition	codon_start : 1 product : fibroblast growth factor binding protein 3 protein_id : NP_082539.2

name	Btaf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123858774 GeneID:107182 MGI:2147538
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA] codon_start : 1 note : TBP-associated factor 170 product : BTAF1 RNA polymerase II, B-TFIID transcription factor-associated protein_id : NP_001074175.1

name	Cpeb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370380 CCDS:CCDS29775.1 GeneID:208922 MGI:2443075
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : cytoplasmic polyadenylation element binding protein 3 protein_id : NP_938042.2

name	March5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42734465 CCDS:CCDS29776.1 GeneID:69104 MGI:1915207
definition	GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : ring finger protein 153 product : membrane-associated ring finger (C3HC4) 5 protein_id : NP_081590.2

name	Ide (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121583922 GeneID:15925 MGI:96412
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004231 - insulysin activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : insulin degrading enzyme protein_id : NP_112419.2

name	Kif11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45476577 CCDS:CCDS29777.1 GeneID:16551 MGI:1098231
definition	GO_component : GO:0005871 - kinesin complex [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0007017 - microtubule-based process [Evidence IEA]; GO:0007100 - mitotic centrosome separation [Evidence IMP] codon_start : 1 note : kinesin 11; kinesin-like 1 product : kinesin family member 11 protein_id : NP_034745.1

name	Hhex (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680219 CCDS:CCDS29778.1 GeneID:15242 MGI:96086
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0035050 - embryonic heart tube development [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0001889 - liver development [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : hematopoietically expressed homeobox, related sequence 2 product : hematopoietically expressed homeobox protein_id : NP_032271.1

name	Exoc6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62526126 CCDS:CCDS29779.1 GeneID:107371 MGI:1351611
definition	GO_component : GO:0000145 - exocyst [Evidence IEA] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006904 - vesicle docking during exocytosis [Evidence IEA] codon_start : 1 note : SEC15 homolog; SEC15-like 1; hemoglobin deficient product : exocyst complex component 6 protein_id : NP_780562.2

name	LOC668195 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668195
definition	number : 1 pseudo : _no_value

name	LOC668195 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668195
definition	number : 2 pseudo : _no_value

name	LOC668195 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668195
definition	number : 3 pseudo : _no_value

name	LOC668201 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668201
definition	number : 1 pseudo : _no_value

name	LOC668201 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668201
definition	number : 2 pseudo : _no_value

name	LOC668230 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668230
definition	number : 1 pseudo : _no_value

name	A830019P07Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149270518 GeneID:329056 MGI:3028035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : RIKEN cDNA A830019P07 gene transcript_id : XR_035408.1

name	LOC100043010 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270521 GeneID:100043010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 503 ESTs, 10 Proteins product : similar to QM protein pseudo : _no_value transcript_id : XR_034211.1

name	EG667490 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94405904 GeneID:667490 MGI:3648745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : predicted gene, EG667490 pseudo : _no_value transcript_id : XR_002172.1

name	LOC631069 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270522 GeneID:631069
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 103 ESTs, 6 Proteins product : similar to ribosomal protein L27 pseudo : _no_value transcript_id : XR_034216.1

clone name	MSMg01-072J20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-505K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138O05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-237L20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-061G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229N16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-093G06.T7 (MSMg01no093_g06.b1)	MSMg01-093G06.TJ (MSMg01no093_g06.g1)
ACC	AG310848	AG310849
length	1,313	1,256
length of high quality (start - end)	141 (110 - 250)	238 (68 - 305)
definition	CHROMAT_FILE: MSMg01no093_g06.b1 PHD_FILE: MSMg01no093_g06.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:47:57 2005	CHROMAT_FILE: MSMg01no093_g06.g1 PHD_FILE: MSMg01no093_g06.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:47:57 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TTTGGGCGCTAAGACTCCATAGGGAGXXXXXXXXXXXXXXXXXXXXXTTC AAAGACCCTTAAAATACACCCCTCCCCGACTGGAGATTCCTCAGGCCCTT AAATGGGTCACTGAACTGTAAACAACAGGATTGCCATTAAAGCCAAGGTG GGACTCCTAAAGCCAAGTTCTTCTACCGGGCTGCACATGGCCAAGGGAGG AGCGTGGTTGTCATTCCTAAGATCCTGACCTGAGCTCCCGAGAGAGCATC GGAGCCCAGATGAGCAGTAACAGCCACACCCATGCCCCATTTTACCTTGG TCCGTGACATTGATGACCACTGGTGCTCTCCTATTACTAATTCCCGTACC ATCTGTGTTAGTAGTCTCCTGGGAAAATTGTTATATTTTTTCTATTGCAG CCTCGTGTACTCATATTCTTCTTTCATTACAACCCGCTTTTACTTACGAC CCCCTATATAGGCTATCGTTGCTTACTATTGTGAGCGCTCTTCTTAATCT CCAGTAGTTACTCTCACCACTATGCTTGTTTCTTTTCTGTTCTATAATGT TTTTTATTCTTACTTCTTTTTTTTTTTATCCTTCTCTATTTGTCCTATTT TCCTTTCGTTTTCACATTCTTCCCCCTTTCCTTTATCTCTTTCTTTTTCT TTTTCATTTTTTCTTATTTTTACTTTCCTATCTTCTACTCTTCTTTCTCT CCTTTCTATTCTTCGATCTTCTCTTTCTTCTTTCTATTTCTTATCTTTTT CATTTTTTTCTTACTATACCCTTTTCTTTTTTTTTCACTTTCTATTATCA TTTTTTTCTCATATTTCTTCTCTTTTACTTTCTTTTCTATTTTTATCCCT TTTTCTCTTTTTCCTCCCTCTTTTCCTCCTTTTCTTCTATCTTTCTCTCT TCTACTCTCTTCTTCTCTTTTTTATCTTTTTATTTTCTCTTATTTTCTTT CTTCGTTTCTCTTTTTCTCTTCCATCACCTTCTTAATCTTTATTTCCTTT ATTCTCTTTATCTTTTATTTTTTTTTTTCCTTCTCCTTTTATTCTTCTTT TTTCTCTTCTTCTCTATTTTCTTATTCTTTTTCTTCTTACTCNTCTATTC TTATTTCTTTTCTATTACTCTCTTCTTTATTCTCTCCTTTATCCTCTTAC TCATTCTATTTCCTTCTCCTTCTTCTTCTTTATCCCCTCTATTTATCTTA TTTTCGACTTTATCTCTATCCTCCACTTACTTTCTATTCTTAGTCATCCA TATCACTTTCCTCTTTTATTGTATTTCTCTTCTTACTTGATTTCCTATCT CTCTCCTTCTTTA	ACATGGTAGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXCCCCTTTAACATGCTGAAGGATACAGATTGCTCTTGAAAAACC CTTTAAAGGAAATTCTACTTACTATTTGTGTTATAAAATAAGTCAACAAA AATTCGACCACAAAAGGAACAAATCAGAAGAGATCAGTTGTAAACTCTTA ATGATTTTCAAAAATTGGTGGGAGATAGTAATTGGCTATAGCCTACCACT GGATTAACTACTCAAGAGTTAAGCAATTTGTTTAAAATGTTACAAAAATA TCAAGGATATTTGGACTTAAACAGTTCAAGATGGTTAACAGCAGAGAGAG AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACATCTTTTTAGAG AGATAAACACTTCTGCCACTGTGTTAGAATAGAGACTACCACATCCTATA TTTCATTGTTATTTTGGTTATTTTGTCTTCTATTCATTCTCTTATATGAA TCCTGTCTATCTCTATATACTGTCCAGTTCATCATTTCATGCCTGTATAA TTCACTCTATCACTGATTGTATTTTCCTCTTACTCCATGTATTTTTTCTC TAGTGTCTTTGTATAATCTTTCTCTTCTTTTATTTCTTCTTTTCTTTCAA TTTTATCTCTCTTTTTTTTTTTTTACGTTCTCTCCTCTTCTTTTTATCTC TTTTTCTCCTCTTGCTTTCTTTTATTTCCCATTATAATCTATTCTTTTTA TCTTTTTCTTTTCTTTTTTTTTTTTTCACTCTTTTTTCCTCTTCTTCTAC TTTTTATCCTATCTATTTTTCTTCCTTTTCTTCTCTTTTTTTCCTCTATT TCTTTTTTTTCTTTTTTATTTCTTCTTTTCTTTTTTCTTATTTCCCTTCT ATTTTTCTTTTTTTTTTTCTTTCTTTTCTTATTCTCTCTCATCTTCTTAT TTTCTCTATTTAATTTTCTCCTTTTTTTTCTCTCCTTTATTCTTCCTCTT CTGTATTTCCATTTTCTTTTTATTTTCTCTTTTTCTATCTCTTTTTATCT CGTCTCTTATTCATTCTATCTCTCTTTCTCTCCCTTCCTTTTTTTTCTTC TTCACTTCTGTACTTTTTGTCTTTATTTTTTCTTCTCGCATTCTTCTAAT TCTTTCCTCTTTTTCCTACTTATCTTCCCTCTTTTCTTTACCTTTTCTTT CTCTCCTTGTTTCTTTCATTTTCTCTCTCTTTTTCACTTCTTTATTCTTC TCTCTA
quality values	Open. Hide. 8 8 10 10 9 10 10 8 8 8 8 8 8 13 19 8 8 9 9 9 18 23 39 32 32 39 37 36 33 33 33 33 37 37 39 37 27 25 19 17 9 9 9 13 16 33 30 28 15 12 12 25 25 12 12 12 12 11 12 12 12 10 13 10 8 8 8 8 12 15 37 43 48 48 48 57 37 43 33 33 33 33 33 36 47 36 41 41 37 37 37 34 34 23 16 16 18 26 24 16 19 14 12 13 10 10 10 12 13 20 21 37 31 33 28 36 39 39 39 39 39 43 43 43 46 43 43 39 39 32 39 39 42 42 36 36 33 40 37 28 28 30 41 32 35 32 31 28 30 30 28 28 22 32 32 57 42 44 44 33 36 25 25 25 32 32 41 29 30 19 24 25 36 36 37 39 36 41 27 24 22 30 30 24 32 32 43 32 32 28 28 21 32 15 18 14 18 18 43 43 38 32 32 32 32 19 19 20 27 32 38 29 32 32 43 43 52 43 43 31 33 33 43 43 52 52 43 42 35 35 38 43 28 21 21 21 24 28 28 28 20 23 23 38 38 32 27 23 32 22 17 18 32 24 24 12 13 11 13 12 32 32 17 21 16 14 10 10 13 10 11 16 21 15 14 14 14 21 21 24 18 20 25 32 32 43 43 43 37 37 39 42 30 22 12 12 12 24 15 12 12 11 18 11 12 12 13 15 18 25 23 10 12 10 10 8 10 14 19 21 21 15 13 10 10 15 19 29 39 39 37 32 30 20 18 9 9 9 9 9 10 10 13 10 11 12 12 12 14 21 12 14 10 10 8 10 10 8 8 8 8 6 6 8 8 15 22 25 29 28 19 15 15 15 15 9 9 9 11 11 11 12 12 9 9 12 18 22 18 14 10 10 10 9 9 9 9 9 9 9 10 15 16 12 12 10 10 15 12 10 8 8 8 8 8 8 9 12 12 19 22 24 25 11 11 8 8 8 8 8 8 8 8 8 8 8 8 8 15 18 12 11 11 12 17 16 11 11 10 10 12 13 13 10 11 10 12 8 10 10 11 11 11 10 10 8 10 6 7 10 10 10 10 8 8 8 8 8 8 8 12 9 10 10 12 12 10 8 8 6 6 8 10 8 10 10 10 13 10 12 12 15 11 9 9 8 6 6 8 8 8 8 8 8 8 9 9 9 9 9 11 12 8 8 6 6 8 8 10 18 11 10 10 12 8 8 8 8 8 10 10 10 8 8 8 13 10 8 6 6 7 6 8 8 8 8 8 10 11 8 8 8 8 8 8 8 9 9 9 8 8 8 13 12 10 10 6 6 6 10 8 8 8 8 10 10 8 8 8 8 8 8 8 8 8 10 11 11 9 10 9 10 10 10 11 13 11 11 11 11 12 11 11 10 9 8 8 8 8 8 8 8 8 8 10 10 10 9 8 12 10 10 10 8 8 9 9 9 13 10 8 8 8 8 8 8 9 9 11 11 12 11 8 8 8 8 8 8 8 10 10 10 11 10 10 6 6 8 8 8 8 8 8 8 8 8 8 8 8 6 8 6 7 8 8 9 8 8 8 8 8 8 8 8 8 10 10 10 8 8 8 8 8 8 8 6 6 8 8 9 9 8 8 8 8 6 6 6 6 8 6 6 8 10 8 8 10 8 10 8 8 8 8 8 6 6 8 8 11 10 8 8 8 8 8 8 8 10 10 10 8 8 8 9 9 8 8 8 8 8 8 9 11 11 11 12 11 11 11 16 11 11 10 10 9 10 10 10 10 8 8 8 8 8 6 6 6 6 8 8 8 8 6 6 8 8 8 8 8 8 8 10 15 22 17 19 10 8 6 6 8 8 7 7 8 8 9 9 8 8 8 10 10 8 10 8 8 8 8 8 8 10 13 11 12 9 9 10 6 6 8 8 10 9 9 9 8 8 6 6 10 8 8 8 8 9 11 12 11 8 8 8 8 8 8 8 8 8 8 6 8 8 8 8 8 8 6 6 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 11 8 8 8 8 8 14 8 8 8 8 12 8 10 10 12 12 8 8 8 8 8 8 9 10 8 8 8 6 6 8 8 8 8 10 10 8 8 8 10 13 10 9 9 7 7 8 8 8 8 8 8 8 8 10 8 8 11 9 9 9 9 8 8 6 6 8 8 8 6 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 9 10 8 8 8 8 8 10 15 16 15 11 11 8 8 8 10 10 10 10 8 10 8 8 6 6 8 8 8 8 8 8 7 7 8 8 9 10 10 10 10 10 10 15 10 12 8 8 6 6 8 8 6 6 8 8 8 9 8 8 10 8 8 6 6 8 10 10 10 8 8 8 8 10 10 9 9 11 11 10 8 6 6 8 6 9 10 10 10 12 10 7 7 8 10 10 8 10 12 19 19 12 10 7 6 8 10 12 8 9 9 9 3 0 3 10 9 9 9 9 11 8 8 8 8 8 12 12 12 14 19 13 12 9 9 9 8 8 9 8 8 8 9 9 9 12 17 12 10 10 10 7 6 8 8 6 6 8 8 8 8 8 8 8 9 9 9 8 10 10 8 8 8 11 14 10 10 7 7 8 10 11 10 8 8 8 8 10 8 10 10 10 10 8 8 9 9 10 10 8 11 8 10 8 7 9 6 6 8 10 9 11 6 8 8 8 10 10 8 8 8 8 8 10 8 7 9 9 11 17 13 11 11 11 13 15 10 9 9 6 8 6 6 8 8 8 8 8 6 6 8 8 8 8 6 8 6 6 6 8 10 9 9 9 9 9 9 9 10 9 9 6 6 6 6 8 8 8 10 8 8 6 6 8 8 8 8 6 6 8 8 9 9 9 8 8 8 9 11 11 11 9 6 8 8 8 8 8 6 6 6 6 10 8 8 10 10 10 8 8 8 8 8 8 8 8 6 6 8 6 8 8 8 8	Open. Hide. 7 7 7 8 8 8 8 8 10 8 7 9 19 10 10 10 15 12 9 9 9 15 19 14 13 10 10 10 13 22 18 21 14 18 18 34 24 29 23 23 23 24 23 19 12 14 23 28 37 48 41 41 40 39 26 21 10 9 6 7 9 8 8 8 9 10 12 16 21 30 30 34 34 35 39 39 37 39 39 39 34 36 42 36 36 34 39 33 33 36 33 33 33 32 32 37 23 21 9 9 9 9 9 9 10 12 23 29 35 35 37 43 33 28 28 30 28 35 35 53 43 43 43 43 43 43 57 48 57 43 43 42 42 42 47 47 42 43 33 28 28 28 32 39 39 37 37 37 37 37 43 43 44 44 30 30 28 36 36 32 28 42 42 43 43 47 47 44 44 43 43 44 42 32 24 13 13 24 32 42 47 44 44 44 44 43 44 43 47 50 50 41 50 43 50 43 43 43 43 43 52 43 52 52 59 59 57 57 52 52 52 52 57 52 52 50 43 41 41 32 20 20 20 38 38 57 43 43 32 32 36 43 44 43 32 33 33 44 38 39 28 28 33 39 39 43 43 29 27 27 33 33 43 44 43 42 33 33 43 43 43 43 43 36 37 37 57 43 52 43 43 28 28 31 38 38 39 50 59 52 52 52 50 42 39 39 41 43 43 52 43 43 41 35 42 42 43 43 44 43 32 18 15 11 11 9 21 22 29 22 21 15 11 11 24 26 32 32 15 13 13 13 15 15 16 15 24 19 28 28 24 24 9 9 9 23 18 25 27 25 19 19 13 15 19 12 12 11 11 11 12 12 17 19 19 23 23 23 20 23 23 33 26 26 14 14 14 15 14 14 14 24 24 23 18 18 14 14 14 21 21 23 23 23 18 18 12 11 11 10 8 8 8 8 8 8 11 15 15 24 22 30 15 17 14 22 20 13 12 12 14 14 21 17 10 11 9 11 11 16 22 16 17 12 16 11 11 11 12 11 11 11 11 11 11 16 11 12 10 8 8 8 8 8 8 10 9 9 9 9 10 11 11 11 9 9 15 12 15 15 28 31 33 30 30 15 10 10 10 16 16 33 23 20 11 11 11 18 16 12 10 9 8 8 8 8 8 10 10 11 11 13 15 8 8 8 8 8 8 8 8 8 12 10 15 10 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 12 12 12 12 11 8 8 8 8 8 8 8 8 8 8 8 8 9 10 9 9 8 8 6 6 8 8 8 8 8 10 10 11 11 9 9 8 8 11 11 9 8 8 6 6 8 8 14 9 10 10 10 10 8 8 8 8 8 12 8 8 8 10 11 12 10 19 19 18 13 9 8 8 7 6 8 6 6 6 8 10 8 8 8 12 9 9 8 8 8 8 10 8 10 8 8 8 8 8 10 10 10 9 9 9 9 9 10 10 10 10 10 8 8 8 8 9 8 8 8 8 6 6 6 6 9 10 10 14 19 16 15 13 6 6 8 8 9 14 14 13 10 10 8 8 8 12 10 8 8 8 8 8 8 6 7 8 8 9 9 11 12 15 13 10 12 10 13 8 8 8 10 9 9 9 9 10 12 10 10 11 10 8 8 8 8 8 9 10 10 8 8 8 10 12 10 10 17 19 23 12 12 10 8 8 8 8 8 10 16 8 8 8 8 8 10 11 11 11 18 15 10 9 8 8 6 6 8 8 8 8 8 8 8 8 8 9 14 12 12 13 15 10 10 16 21 28 21 21 11 8 8 6 6 8 8 12 12 11 10 10 8 8 10 10 11 8 8 8 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 10 12 12 13 13 13 9 12 8 8 8 8 8 10 10 10 8 8 8 10 10 8 8 8 10 10 11 13 13 9 8 19 8 8 8 8 8 8 8 8 8 17 19 18 17 13 18 11 10 10 10 10 8 10 7 7 9 9 10 8 10 8 8 8 10 10 9 10 10 14 11 12 12 18 14 16 14 14 10 10 11 11 10 8 8 10 10 10 10 12 14 15 13 10 10 9 10 12 12 11 10 8 12 10 11 12 12 10 8 6 6 8 12 14 10 10 10 10 10 10 10 9 8 8 8 8 8 8 8 8 8 11 16 18 8 8 6 6 8 8 8 10 8 8 8 8 8 9 10 13 10 10 12 8 8 6 6 8 8 10 10 10 12 10 10 11 11 11 8 8 8 12 7 9 10 7 8 8 8 10 10 8 8 6 6 8 8 10 11 6 6 6 6 8 8 8 8 6 6 8 8 8 9 8 8 13 12 12 9 10 10 12 11 11 8 8 8 8 8 8 8 8 8 10 8 8 8 8 10 10 16 18 15 11 8 8 10 8 7 7 6 8 8 8 8 10 11 11 10 10 10 8 8 8 8 8 8 6 6 8 8 8 8 10 11 10 10 13 10 13 8 8 8 8 8 9 9 13 10 11 11 8 8 6 6 8 8 10 10 16 9 10 11 10 10 10 8 8 6 6 8 10 8 8 8 7 7 9 9 8 10 8 8 8 8 10 10 10 12 9 8 8 8 6 6 6 6 6 8 8 8 6 6 6 8 8 6 6 7 8 9 9 8 8 6 6 11 10 10 10 11 8 6 8 6 6 8 10 8 8 9 10 10 10 8 8 8 8 10 8 8 8 6 6 6 10 8 8 8 8 8 8 8 15 11 11 10 10 15 10 10 8 10 10 8 8 7 8 8 11 16 11 10 8 8 9 8 8 8 8 8 8 8 8 8 8 8 9 9 18 18 11 10 10 8 10 8 8 8 8 8 8 8 8 7 9 10 10 8 6 8 10 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no093_g06.b1 MSMg01no093_g06.b1 CHROMAT_FILE:
MSMg01no093_g06.b1 PHD_FILE: MSMg01no093_g06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:57 2005
         (141 letters)



>mm_chr19_36704032_36704572
          Length = 541

 Score =  257 bits (133), Expect = 2e-73
 Identities = 139/141 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   actgaactgtaaacaacaggattgccattaaagccaaggtgggactcctaaagccaagtt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 201 actgaactgtaaacaacaggattgccattaaagccaaggtgggactcctaaagccgtgtt 260

                                                                       
Query: 61  cttctaccgggctgcacatggccaagggaggagcgtggttgtcattcctaagatcctgac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttctaccgggctgcacatggccaagggaggagcgtggttgtcattcctaagatcctgac 320

                                
Query: 121 ctgagctcccgagagagcatc 141
           |||||||||||||||||||||
Sbjct: 321 ctgagctcccgagagagcatc 341


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 141
Length of database: 541
Length adjustment: 8
Effective length of query: 133
Effective length of database: 533
Effective search space:    70889
Effective search space used:    70889
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information