Query= MSMg01no093_l15.b1 MSMg01no093_l15.b1 CHROMAT_FILE:
MSMg01no093_l15.b1 PHD_FILE: MSMg01no093_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:48:46 2005
(139 letters)
>mm_chr19_30823163_30823701
Length = 539
Score = 242 bits (125), Expect = 8e-69
Identities = 134/137 (97%)
Strand = Plus / Plus
Query: 3 tgtattacttaggaaagcacttgagggagtaaagattcattcagtgttaaaaattctatc 62
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 203 tgtattacttaggaaagcacttgggggagtaaagattcattcagtgttaaaaattctatc 262
Query: 63 attgttgctcttaagtaaatttttgcaaaattgaactacttctctgtgtttgtataattc 122
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 actgttgctcttatgtaaatttttgcaaaattgaactacttctctgtgtttgtataattc 322
Query: 123 tgtgtagtatgtttaag 139
|||||||||||||||||
Sbjct: 323 tgtgtagtatgtttaag 339
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 139
Length of database: 539
Length adjustment: 8
Effective length of query: 131
Effective length of database: 531
Effective search space: 69561
Effective search space used: 69561
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no093_l15.g1 MSMg01no093_l15.g1 CHROMAT_FILE:
MSMg01no093_l15.g1 PHD_FILE: MSMg01no093_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:48:46 2005
(301 letters)
>mm_chr19_30967378_30968077
Length = 700
Score = 482 bits (249), Expect = e-140
Identities = 288/301 (95%), Gaps = 1/301 (0%)
Strand = Plus / Minus
Query: 1 gtgaaatgttctcagaaaaatacagatttatagatgagaaaaaagtaaggttaaactcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtgaaatgttctcagaaaaatacagatttatagatgagaaaaaagtaaggttaaactcaa 441
Query: 61 aggtcacatttgtttttggtcttaggtgtggtttattagctgttttaatattccgaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 440 aggtcacatttgtttttggtcttaggtgtggtttattagctgttttaatattctgaagca 381
Query: 121 tttctgaaaaaagaataatctatatgcaggcaatattcactgtaatttttgttagttgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttctgaaaaaagaataatctatatgcaggcaatattcactgtaatttttgttagttgta 321
Query: 181 tcgaagttcttgacttccatctcgtgaaagactgaagccaaatccacgggctctgacagg 240
|||||| ||||||||||||||||||||||||||||||||||||||| ||| | |||||||
Sbjct: 320 tcgaagctcttgacttccatctcgtgaaagactgaagccaaatccagggg-tgtgacagg 262
Query: 241 ttcttgtcctttctcattttttttttgattttcttgtccttctgtctggtctcgatttta 300
||||||||||||||||| | |||| |||||||||| |||||||| ||||| |||||||
Sbjct: 261 ttcttgtcctttctcatatcttttcaaattttcttgtacttctgtccggtcttgatttta 202
Query: 301 g 301
|
Sbjct: 201 g 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 700
Length adjustment: 9
Effective length of query: 292
Effective length of database: 691
Effective search space: 201772
Effective search space used: 201772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
